Rmu_sc0007122.1_g000001

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007122.1
Physical Location & Seq
Forward (+)
5750 .. 6204
455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007122.1_g000001.1.cds

Sequence Viewer

Length: 318 bp
atgcctggtatgactgcttatgctagtttctacgaagtctgcaatccaaagaaaggagagtatgtttacatttcctcagcattcagggttgttggtcagattgttggccaatttgccaaactcatggttgacatattgaagaacaagtttggatttgatgaggcattcgattacaaggaagagcccgacttggatgctgctttgaagaggtacttcccaaagggcatagacatttacttcgaaaatgttggaggcaaaataccggatgcagtgctgctcaacatgagacttcacagtcgattgccgtgtgtggcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.88

Weight (kDa)

6.56

Isoelectric Point (pI)

23.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 294
AcoI YGGCCR 1 cut(s) 106
AfaI GTAC 1 cut(s) 212
AfiI CCNNNNNNNGG 1 cut(s) 53
AgsI TTSAA 2 cut(s) 139, 205
AjnI CCWGG 1 cut(s) 4
Alw26I GTCTC 1 cut(s) 280
AoxI GGCC 1 cut(s) 106
ApeKI GCWGC 2 cut(s) 197, 274
ArsI GACNNNNNNTTYG 2 cut(s) 221, 253
AsuII TTCGAA 1 cut(s) 240
BalI TGGCCA 1 cut(s) 108
BanII GRGCYC 1 cut(s) 186
BbvCI CCTCAGC 1 cut(s) 76
BbvI GCAGC 2 cut(s) 184, 261
BceAI ACGGC 1 cut(s) 289
BcgI CGANNNNNNTGC 2 cut(s) 176, 210
BciT130I CCWGG 1 cut(s) 6
BcoDI GTCTC 1 cut(s) 280
BfaI CTAG 1 cut(s) 24
BisI GCNGC 2 cut(s) 198, 275
BlsI GCNGC 2 cut(s) 199, 276
Bme1390I CCNGG 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 6
BmsI GCATC 2 cut(s) 184, 256
Bpu10I CCTNAGC 1 cut(s) 76
Bpu14I TTCGAA 1 cut(s) 240
BsaWI WCCGGW 1 cut(s) 262
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bsc4I CCNNNNNNNGG 1 cut(s) 53
BseBI CCWGG 1 cut(s) 6
BseGI GGATG 2 cut(s) 199, 271
BseLI CCNNNNNNNGG 1 cut(s) 53
BseMII CTCAG 1 cut(s) 90
BseXI GCAGC 2 cut(s) 184, 261
BshFI GGCC 1 cut(s) 108
BsiSI CCGG 1 cut(s) 263
BslI CCNNNNNNNGG 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 280
BsmI GAATGC 2 cut(s) 80, 164
BsnI GGCC 1 cut(s) 108
Bsp119I TTCGAA 1 cut(s) 240
Bsp1286I GDGCHC 1 cut(s) 186
BspANI GGCC 1 cut(s) 108
BspCNI CTCAG 1 cut(s) 89
BspQI GCTCTTC 1 cut(s) 174
BspT104I TTCGAA 1 cut(s) 240
Bst2UI CCWGG 1 cut(s) 6
Bst4CI ACNGT 1 cut(s) 296
Bst6I CTCTTC 2 cut(s) 174, 200
BstBI TTCGAA 1 cut(s) 240
BstDEI CTNAG 1 cut(s) 76
BstF5I GGATG 2 cut(s) 199, 271
BstMAI GTCTC 1 cut(s) 280
BstNI CCWGG 1 cut(s) 6
BstSCI CCNGG 1 cut(s) 4
BstV1I GCAGC 2 cut(s) 184, 261
BstXI CCANNNNNNTGG 1 cut(s) 124
BsuRI GGCC 1 cut(s) 108
BtsCI GGATG 2 cut(s) 199, 271
BtsI GCAGTG 1 cut(s) 276
BtsIMutI CAGTG 1 cut(s) 276
Csp6I GTAC 1 cut(s) 211
CviAII CATG 3 cut(s) 124, 283, 315
CviJI RGCY 2 cut(s) 108, 184
CviKI_1 RGCY 2 cut(s) 108, 184
CviQI GTAC 1 cut(s) 211
DdeI CTNAG 1 cut(s) 76
DrdI GACNNNNNNGTC 1 cut(s) 294
DseDI GACNNNNNNGTC 1 cut(s) 294
EaeI YGGCCR 1 cut(s) 106
Eam1104I CTCTTC 2 cut(s) 174, 200
EarI CTCTTC 2 cut(s) 174, 200
Eco24I GRGCYC 1 cut(s) 186
EcoRII CCWGG 1 cut(s) 4
EcoT38I GRGCYC 1 cut(s) 186
FaeI CATG 3 cut(s) 127, 286, 318
FaiI YATR 8 cut(s) 11, 21, 63, 125, 134, 227, 284, 316
FalI AAGNNNNNCTT 2 cut(s) 197, 229
FatI CATG 3 cut(s) 123, 282, 314
Fnu4HI GCNGC 2 cut(s) 198, 275
FokI GGATG 2 cut(s) 206, 278
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 2 cut(s) 198, 275
FspBI CTAG 1 cut(s) 24
GluI GCNGC 2 cut(s) 198, 275
HaeIII GGCC 1 cut(s) 108
HapII CCGG 1 cut(s) 263
Hin1II CATG 3 cut(s) 127, 286, 318
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HpaII CCGG 1 cut(s) 263
Hpy166II GTNNAC 2 cut(s) 67, 130
Hpy188I TCNGA 1 cut(s) 99
Hpy8I GTNNAC 2 cut(s) 67, 130
HpyCH4III ACNGT 1 cut(s) 296
HpyCH4V TGCA 2 cut(s) 42, 269
HpyF3I CTNAG 1 cut(s) 76
Hsp92II CATG 3 cut(s) 127, 286, 318
LguI GCTCTTC 1 cut(s) 174
LpnPI CCDG 3 cut(s) 18, 70, 276
Lsp1109I GCAGC 2 cut(s) 184, 261
LweI GCATC 2 cut(s) 184, 256
MaeI CTAG 1 cut(s) 24
MboII GAAGA 3 cut(s) 151, 191, 217
MhlI GDGCHC 1 cut(s) 186
MlsI TGGCCA 1 cut(s) 108
MluCI AATT 1 cut(s) 110
MluNI TGGCCA 1 cut(s) 108
MmeI TCCRAC 1 cut(s) 229
MnlI CCTC 4 cut(s) 85, 154, 201, 245
Mox20I TGGCCA 1 cut(s) 108
MscI TGGCCA 1 cut(s) 108
Msp20I TGGCCA 1 cut(s) 108
MspI CCGG 1 cut(s) 263
MspR9I CCNGG 1 cut(s) 6
Mva1269I GAATGC 2 cut(s) 80, 164
MvaI CCWGG 1 cut(s) 6
NlaIII CATG 3 cut(s) 127, 286, 318
NspV TTCGAA 1 cut(s) 240
PciSI GCTCTTC 1 cut(s) 174
PctI GAATGC 2 cut(s) 80, 164
PkrI GCNGC 2 cut(s) 199, 276
Psp6I CCWGG 1 cut(s) 4
PspGI CCWGG 1 cut(s) 4
RsaI GTAC 1 cut(s) 212
RsaNI GTAC 1 cut(s) 211
SapI GCTCTTC 1 cut(s) 174
SatI GCNGC 2 cut(s) 198, 275
ScrFI CCNGG 1 cut(s) 6
SduI GDGCHC 1 cut(s) 186
SetI ASST 1 cut(s) 212
SfaNI GCATC 2 cut(s) 184, 256
SfuI TTCGAA 1 cut(s) 240
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 24
StyD4I CCNGG 1 cut(s) 4
TaaI ACNGT 1 cut(s) 296
TaqI TCGA 3 cut(s) 168, 240, 298
TasI AATT 1 cut(s) 110
TscAI CASTG 1 cut(s) 276
TseI GCWGC 2 cut(s) 197, 274
TspRI CASTG 1 cut(s) 276
XspI CTAG 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.