RchiOBHm_Chr2g0084761

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
442407 .. 442799
393 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46033

Sequence Viewer

Length: 393 bp
ATGCCAGGTACTTTCCTGAAGGTATTGATATTTACTAATTACTATGAAAATGTTGGGGGAAAGATGCTGGATGCAGTGCTACCAAACATGAAGTTCGGGGGACGAATTGCAGTTTGTGGGATGATATCCCAATATAACCTTGAGAAGCCTGAAGGTGTACACAATCTAATGTTCCTTGTTTATAGAGAGGTCCGGATGCAAGGTTTTGCTGTTTTGAATTACTATCATCTTTACGAGAAGTTTCTTGAAACGGTTCTGCTTGACATAAAAAAAGGGAAGATTACATATGTGGAAGATGTAGTTGAAGGCCTCGAAAGTGCTCCATCGGCCCTGATTGGACTCTTTACAGGTCGCAATGTCGGAAAGCAGGTTGTCGTTGTTTCCCGAGAATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

130

Amino Acids

14.67

Weight (kDa)

7.81

Isoelectric Point (pI)

23.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 358
AccIII TCCGGA 1 cut(s) 192
AcuI CTGAAG 2 cut(s) 38, 171
AfaI GTAC 2 cut(s) 10, 159
AgsI TTSAA 3 cut(s) 217, 248, 305
AjnI CCWGG 1 cut(s) 4
Alw21I GWGCWC 1 cut(s) 322
Ama87I CYCGRG 1 cut(s) 384
Aor13HI TCCGGA 1 cut(s) 192
AoxI GGCC 2 cut(s) 307, 327
Asp700I GAANNNNTTC 1 cut(s) 252
AspS9I GGNCC 2 cut(s) 190, 328
AvaI CYCGRG 1 cut(s) 384
AvaII GGWCC 1 cut(s) 190
Bbv12I GWGCWC 1 cut(s) 322
BccI CCATC 1 cut(s) 331
BciT130I CCWGG 1 cut(s) 6
BfuAI ACCTGC 1 cut(s) 358
Bme1390I CCNGG 1 cut(s) 6
Bme18I GGWCC 1 cut(s) 190
BmeT110I CYCGRG 1 cut(s) 384
BmgT120I GGNCC 2 cut(s) 190, 328
BmrFI CCNGG 1 cut(s) 6
BmsI GCATC 3 cut(s) 54, 61, 186
BpuEI CTTGAG 1 cut(s) 161
BsaWI WCCGGW 1 cut(s) 192
Bse3DI GCAATG 1 cut(s) 361
BseAI TCCGGA 1 cut(s) 192
BseBI CCWGG 1 cut(s) 6
BseGI GGATG 3 cut(s) 76, 126, 201
BseMI GCAATG 1 cut(s) 361
BshFI GGCC 2 cut(s) 309, 329
BsiHKAI GWGCWC 1 cut(s) 322
BsiHKCI CYCGRG 1 cut(s) 384
BsiSI CCGG 1 cut(s) 193
BslFI GGGAC 1 cut(s) 114
BsmFI GGGAC 1 cut(s) 114
BsnI GGCC 2 cut(s) 309, 329
BsoBI CYCGRG 1 cut(s) 384
Bsp1286I GDGCHC 1 cut(s) 322
Bsp13I TCCGGA 1 cut(s) 192
Bsp1407I TGTACA 1 cut(s) 157
BspANI GGCC 2 cut(s) 309, 329
BspEI TCCGGA 1 cut(s) 192
BspMI ACCTGC 1 cut(s) 358
BsrDI GCAATG 1 cut(s) 361
BsrGI TGTACA 1 cut(s) 157
Bst2UI CCWGG 1 cut(s) 6
Bst4CI ACNGT 1 cut(s) 253
BstAUI TGTACA 1 cut(s) 157
BstF5I GGATG 3 cut(s) 76, 126, 201
BstMWI GCNNNNNNNGC 1 cut(s) 326
BstNI CCWGG 1 cut(s) 6
BstSCI CCNGG 1 cut(s) 4
BsuRI GGCC 2 cut(s) 309, 329
BtsCI GGATG 3 cut(s) 76, 126, 201
BtsI GCAGTG 1 cut(s) 81
BtsIMutI CAGTG 1 cut(s) 81
BveI ACCTGC 1 cut(s) 358
Cfr13I GGNCC 2 cut(s) 190, 328
Csp6I GTAC 2 cut(s) 9, 158
CviAII CATG 1 cut(s) 88
CviJI RGCY 3 cut(s) 148, 309, 329
CviKI_1 RGCY 3 cut(s) 148, 309, 329
CviQI GTAC 2 cut(s) 9, 158
Eco147I AGGCCT 1 cut(s) 309
Eco32I GATATC 1 cut(s) 126
Eco47I GGWCC 1 cut(s) 190
Eco57I CTGAAG 2 cut(s) 38, 171
Eco88I CYCGRG 1 cut(s) 384
EcoRII CCWGG 1 cut(s) 4
EcoRV GATATC 1 cut(s) 126
FaeI CATG 1 cut(s) 91
FaiI YATR 7 cut(s) 45, 89, 135, 183, 266, 286, 288
FaqI GGGAC 1 cut(s) 114
FatI CATG 1 cut(s) 87
FauNDI CATATG 1 cut(s) 286
FokI GGATG 3 cut(s) 83, 133, 208
HaeIII GGCC 2 cut(s) 309, 329
HapII CCGG 1 cut(s) 193
Hin1II CATG 1 cut(s) 91
HinfI GANTC 1 cut(s) 339
HpaII CCGG 1 cut(s) 193
Hpy166II GTNNAC 2 cut(s) 158, 160
Hpy188I TCNGA 1 cut(s) 362
Hpy188III TCNNGA 4 cut(s) 16, 193, 245, 384
Hpy8I GTNNAC 2 cut(s) 158, 160
HpyAV CCTTC 3 cut(s) 13, 146, 299
HpyCH4III ACNGT 1 cut(s) 253
HpyCH4V TGCA 3 cut(s) 74, 110, 199
HpyF10VI GCNNNNNNNGC 1 cut(s) 326
Hsp92II CATG 1 cut(s) 91
Kpn2I TCCGGA 1 cut(s) 192
LmnI GCTCC 1 cut(s) 325
LpnPI CCDG 8 cut(s) 18, 29, 53, 162, 206, 333, 344, 353
LweI GCATC 3 cut(s) 54, 61, 186
MboII GAAGA 2 cut(s) 289, 305
MhlI GDGCHC 1 cut(s) 322
MluCI AATT 3 cut(s) 37, 105, 217
MlyI GAGTC 1 cut(s) 333
MmeI TCCRAC 1 cut(s) 340
MnlI CCTC 2 cut(s) 181, 320
MroI TCCGGA 1 cut(s) 192
MroXI GAANNNNTTC 1 cut(s) 252
MspI CCGG 1 cut(s) 193
MspR9I CCNGG 1 cut(s) 6
MvaI CCWGG 1 cut(s) 6
MwoI GCNNNNNNNGC 1 cut(s) 326
NdeI CATATG 1 cut(s) 286
NlaIII CATG 1 cut(s) 91
PceI AGGCCT 1 cut(s) 309
PdmI GAANNNNTTC 1 cut(s) 252
PleI GAGTC 1 cut(s) 333
PpsI GAGTC 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 4
PspGI CCWGG 1 cut(s) 4
PspPI GGNCC 2 cut(s) 190, 328
RsaI GTAC 2 cut(s) 10, 159
RsaNI GTAC 2 cut(s) 9, 158
Sau96I GGNCC 2 cut(s) 190, 328
SchI GAGTC 1 cut(s) 333
ScrFI CCNGG 1 cut(s) 6
SduI GDGCHC 1 cut(s) 322
SetI ASST 8 cut(s) 10, 24, 141, 157, 192, 205, 352, 372
SfaNI GCATC 3 cut(s) 54, 61, 186
SinI GGWCC 1 cut(s) 190
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
Sse9I AATT 3 cut(s) 37, 105, 217
SseBI AGGCCT 1 cut(s) 309
StuI AGGCCT 1 cut(s) 309
StyD4I CCNGG 1 cut(s) 4
TaaI ACNGT 1 cut(s) 253
TaqI TCGA 1 cut(s) 312
TasI AATT 3 cut(s) 37, 105, 217
TatI WGTACW 1 cut(s) 157
TscAI CASTG 1 cut(s) 81
TspDTI ATGAA 2 cut(s) 60, 104
TspRI CASTG 1 cut(s) 81
VpaK11BI GGWCC 1 cut(s) 190
XmnI GAANNNNTTC 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.