pycom15g13100

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
8978222 .. 8978410
189 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g13100.1

Sequence Viewer

Length: 189 bp
ATGCAACTCACCACCGCCACCACCAAGCTCAAGCTTCCAGAAGATTCCAAAGGGGTTCTGGTGAAGAACCTCTACTTGTCCTGCGACCCTTTTATGAGAGGCCGCATGACCAAGCGTGAACCGGGCACCAGTTACGTCGATTCCTTCAACGCCGGTTCGGTCAGTCACTGTATATATTATCTTATATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

6.98

Weight (kDa)

9.06

Isoelectric Point (pI)

32.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 10 - 54 1.2e-07 N-terminal domain of oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 125
AciI CCGC 2 cut(s) 15, 103
AgsI TTSAA 1 cut(s) 148
AluBI AGCT 2 cut(s) 28, 34
AluI AGCT 2 cut(s) 28, 34
AlwNI CAGNNNCTG 1 cut(s) 168
AoxI GGCC 1 cut(s) 100
AsuC2I CCSGG 1 cut(s) 123
AsuHPI GGTGA 1 cut(s) 73
BaeGI GKGCMC 1 cut(s) 128
BanI GGYRCC 1 cut(s) 125
BarI GAAGNNNNNNTAC 2 cut(s) 56, 88
BcnI CCSGG 1 cut(s) 123
BisI GCNGC 1 cut(s) 103
BlsI GCNGC 1 cut(s) 104
Bme1390I CCNGG 1 cut(s) 123
BmiI GGNNCC 1 cut(s) 127
BmrFI CCNGG 1 cut(s) 123
BpuEI CTTGAG 1 cut(s) 14
BpuMI CCSGG 1 cut(s) 123
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 1 cut(s) 129
BseNI ACTGG 1 cut(s) 129
BseSI GKGCMC 1 cut(s) 128
BshFI GGCC 1 cut(s) 102
BshNI GGYRCC 1 cut(s) 125
BsiSI CCGG 2 cut(s) 122, 153
BsnI GGCC 1 cut(s) 102
Bsp1286I GDGCHC 1 cut(s) 128
BspACI CCGC 2 cut(s) 15, 103
BspANI GGCC 1 cut(s) 102
BspLI GGNNCC 1 cut(s) 127
BspT107I GGYRCC 1 cut(s) 125
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 1 cut(s) 129
BssAI RCCGGY 1 cut(s) 152
Bst4CI ACNGT 1 cut(s) 170
BstSCI CCNGG 1 cut(s) 121
BstSLI GKGCMC 1 cut(s) 128
BsuRI GGCC 1 cut(s) 102
BtsIMutI CAGTG 1 cut(s) 166
CaiI CAGNNNCTG 1 cut(s) 168
Cfr10I RCCGGY 1 cut(s) 152
CviAII CATG 1 cut(s) 106
CviJI RGCY 3 cut(s) 28, 34, 102
CviKI_1 RGCY 3 cut(s) 28, 34, 102
FaeI CATG 1 cut(s) 109
FaiI YATR 6 cut(s) 95, 107, 173, 175, 185, 187
FatI CATG 1 cut(s) 105
Fnu4HI GCNGC 1 cut(s) 103
Fsp4HI GCNGC 1 cut(s) 103
GluI GCNGC 1 cut(s) 103
HaeIII GGCC 1 cut(s) 102
HapII CCGG 2 cut(s) 122, 153
Hin1II CATG 1 cut(s) 109
HindIII AAGCTT 1 cut(s) 32
HinfI GANTC 2 cut(s) 44, 140
HpaII CCGG 2 cut(s) 122, 153
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 119
Hpy188III TCNNGA 1 cut(s) 38
Hpy8I GTNNAC 1 cut(s) 119
Hpy99I CGWCG 1 cut(s) 140
HpyAV CCTTC 1 cut(s) 154
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 1 cut(s) 4
HpySE526I ACGT 1 cut(s) 135
Hsp92II CATG 1 cut(s) 109
LpnPI CCDG 6 cut(s) 44, 51, 94, 135, 142, 166
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 2 cut(s) 131, 164
MboII GAAGA 2 cut(s) 53, 76
MhlI GDGCHC 1 cut(s) 128
MnlI CCTC 2 cut(s) 80, 92
MspI CCGG 2 cut(s) 122, 153
MspR9I CCNGG 1 cut(s) 123
NciI CCSGG 1 cut(s) 123
NlaIII CATG 1 cut(s) 109
NlaIV GGNNCC 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 164
PfeI GAWTC 2 cut(s) 44, 140
PkrI GCNGC 1 cut(s) 104
PspN4I GGNNCC 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 168
SatI GCNGC 1 cut(s) 103
ScrFI CCNGG 1 cut(s) 123
SduI GDGCHC 1 cut(s) 128
SetI ASST 4 cut(s) 30, 36, 72, 138
SmlI CTYRAG 1 cut(s) 29
SmoI CTYRAG 1 cut(s) 29
SsiI CCGC 2 cut(s) 15, 103
StyD4I CCNGG 1 cut(s) 121
TaaI ACNGT 1 cut(s) 170
TaiI ACGT 1 cut(s) 138
TaqI TCGA 1 cut(s) 138
TaqII GACCGA 1 cut(s) 148
TauI GCSGC 1 cut(s) 105
TfiI GAWTC 2 cut(s) 44, 140
TscAI CASTG 1 cut(s) 173
TseFI GTSAC 1 cut(s) 164
Tsp45I GTSAC 1 cut(s) 164
TspRI CASTG 1 cut(s) 173
XcmI CCANNNNNNNNNTGG 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.