Rmu_sc0008804.1_g000002

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008804.1
Physical Location & Seq
Reverse (-)
4363 .. 5303
941 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008804.1_g000002.1.cds

Sequence Viewer

Length: 450 bp
atggctaaagttttggaatctggggatgcaaagtttaagcaaggcaacttggtttggggaatgactggctggaaatggtatagtctcatcgctttcattcagtatttgtttaagattcccaccaccgacggtggcaccgatgtgcctctctcttattatactggaattgttggggtgtgcgttcctgtaatgcacaatgtatgtcctgcgacactcctgcttaatgcgctcagggctcatgacatgtgtttgcttaatgtaggtatgcgtggtttgactgcctatgctggtttttatgagatcttctctcctaagaaaggagagacggtcttcgtttcattggcatcagaagcggaaggtcagcttgttggccaatttgccaagttggccggatgctatgttgttgggagtgctggaagcgaagacaaggtagcaattactactttgtga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

149

Amino Acids

16.01

Weight (kDa)

6.7

Isoelectric Point (pI)

25.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 134
AciI CCGC 1 cut(s) 353
AcoI YGGCCR 2 cut(s) 370, 387
AfiI CCNNNNNNNGG 1 cut(s) 317
AflIII ACRYGT 1 cut(s) 243
AleI CACNNNNGTG 1 cut(s) 140
AluBI AGCT 1 cut(s) 364
AluI AGCT 1 cut(s) 364
Alw26I GTCTC 2 cut(s) 89, 317
AoxI GGCC 2 cut(s) 370, 387
AspLEI GCGC 1 cut(s) 229
BalI TGGCCA 1 cut(s) 372
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 1 cut(s) 238
BbsI GAAGAC 2 cut(s) 322, 429
BcgI CGANNNNNNTGC 2 cut(s) 199, 233
BcoDI GTCTC 2 cut(s) 89, 317
BglI GCCNNNNNGGC 1 cut(s) 386
BglII AGATCT 1 cut(s) 300
BmiI GGNNCC 1 cut(s) 136
BmsI GCATC 3 cut(s) 16, 353, 383
BpiI GAAGAC 2 cut(s) 322, 429
BplI GAGNNNNNCTC 2 cut(s) 290, 322
Bpu10I CCTNAGC 1 cut(s) 230
BsaXI ACNNNNNCTCC 2 cut(s) 312, 342
Bsc4I CCNNNNNNNGG 1 cut(s) 317
Bse1I ACTGG 2 cut(s) 70, 166
BseGI GGATG 2 cut(s) 31, 398
BseLI CCNNNNNNNGG 1 cut(s) 317
BseMII CTCAG 1 cut(s) 244
BseNI ACTGG 2 cut(s) 70, 166
BshFI GGCC 2 cut(s) 372, 389
BshNI GGYRCC 1 cut(s) 134
BsiSI CCGG 1 cut(s) 390
BslI CCNNNNNNNGG 1 cut(s) 317
BsmAI GTCTC 2 cut(s) 89, 317
BsmBI CGTCTC 1 cut(s) 317
BsnI GGCC 2 cut(s) 372, 389
Bsp1286I GDGCHC 1 cut(s) 238
Bsp143I GATC 1 cut(s) 300
BspACI CCGC 1 cut(s) 353
BspANI GGCC 2 cut(s) 372, 389
BspCNI CTCAG 1 cut(s) 243
BspHI TCATGA 1 cut(s) 238
BspLI GGNNCC 1 cut(s) 136
BspT107I GGYRCC 1 cut(s) 134
BsrI ACTGG 2 cut(s) 70, 166
BssMI GATC 1 cut(s) 300
Bst4CI ACNGT 2 cut(s) 131, 328
BstDEI CTNAG 2 cut(s) 230, 312
BstENI CCTNNNNNAGG 1 cut(s) 315
BstF5I GGATG 2 cut(s) 31, 398
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 1 cut(s) 303
BstMAI GTCTC 2 cut(s) 89, 317
BstMBI GATC 1 cut(s) 300
BstMWI GCNNNNNNNGC 4 cut(s) 226, 233, 350, 386
BstNSI RCATGY 1 cut(s) 247
BstV2I GAAGAC 2 cut(s) 322, 429
BstX2I RGATCY 1 cut(s) 300
BstYI RGATCY 1 cut(s) 300
BsuRI GGCC 2 cut(s) 372, 389
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 31, 398
CciI TCATGA 1 cut(s) 238
CfoI GCGC 1 cut(s) 229
CviAII CATG 2 cut(s) 239, 244
CviJI RGCY 6 cut(s) 5, 69, 236, 364, 372, 389
CviKI_1 RGCY 6 cut(s) 5, 69, 236, 364, 372, 389
DdeI CTNAG 2 cut(s) 230, 312
DpnI GATC 1 cut(s) 302
DpnII GATC 1 cut(s) 300
EaeI YGGCCR 2 cut(s) 370, 387
Eco24I GRGCYC 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 315
EcoT38I GRGCYC 1 cut(s) 238
Esp3I CGTCTC 1 cut(s) 317
FaeI CATG 2 cut(s) 242, 247
FaiI YATR 9 cut(s) 81, 159, 202, 240, 245, 266, 285, 297, 399
FalI AAGNNNNNCTT 2 cut(s) 348, 380
FatI CATG 2 cut(s) 238, 243
FokI GGATG 2 cut(s) 38, 405
FriOI GRGCYC 1 cut(s) 238
GlaI GCGC 1 cut(s) 228
HaeIII GGCC 2 cut(s) 372, 389
HapII CCGG 1 cut(s) 390
HhaI GCGC 1 cut(s) 229
Hin1II CATG 2 cut(s) 242, 247
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
HinfI GANTC 2 cut(s) 17, 115
HpaII CCGG 1 cut(s) 390
Hpy188I TCNGA 1 cut(s) 349
Hpy188III TCNNGA 1 cut(s) 239
Hpy99I CGWCG 1 cut(s) 131
HpyAV CCTTC 1 cut(s) 350
HpyCH4III ACNGT 2 cut(s) 131, 328
HpyCH4V TGCA 2 cut(s) 29, 193
HpyF10VI GCNNNNNNNGC 4 cut(s) 226, 233, 350, 386
HpyF3I CTNAG 2 cut(s) 230, 312
Hsp92II CATG 2 cut(s) 242, 247
HspAI GCGC 1 cut(s) 227
Kzo9I GATC 1 cut(s) 300
LweI GCATC 3 cut(s) 16, 353, 383
MalI GATC 1 cut(s) 302
MboI GATC 1 cut(s) 300
MboII GAAGA 3 cut(s) 295, 322, 434
MflI RGATCY 1 cut(s) 300
MhlI GDGCHC 1 cut(s) 238
MlsI TGGCCA 1 cut(s) 372
MluCI AATT 3 cut(s) 165, 374, 435
MluNI TGGCCA 1 cut(s) 372
MnlI CCTC 1 cut(s) 156
Mox20I TGGCCA 1 cut(s) 372
MscI TGGCCA 1 cut(s) 372
MseI TTAA 4 cut(s) 36, 111, 222, 255
MslI CAYNNNNRTG 1 cut(s) 140
Msp20I TGGCCA 1 cut(s) 372
MspI CCGG 1 cut(s) 390
MwoI GCNNNNNNNGC 4 cut(s) 226, 233, 350, 386
NdeII GATC 1 cut(s) 300
NlaIII CATG 2 cut(s) 242, 247
NlaIV GGNNCC 1 cut(s) 136
NspI RCATGY 1 cut(s) 247
OliI CACNNNNGTG 1 cut(s) 140
PagI TCATGA 1 cut(s) 238
PciI ACATGT 1 cut(s) 243
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PfeI GAWTC 2 cut(s) 17, 115
PscI ACATGT 1 cut(s) 243
PspN4I GGNNCC 1 cut(s) 136
PsuI RGATCY 1 cut(s) 300
RseI CAYNNNNRTG 1 cut(s) 140
SaqAI TTAA 4 cut(s) 36, 111, 222, 255
Sau3AI GATC 1 cut(s) 300
SduI GDGCHC 1 cut(s) 238
SetI ASST 4 cut(s) 265, 361, 366, 432
SfaNI GCATC 3 cut(s) 16, 353, 383
SmiMI CAYNNNNRTG 1 cut(s) 140
Sse9I AATT 3 cut(s) 165, 374, 435
SsiI CCGC 1 cut(s) 353
TaaI ACNGT 2 cut(s) 131, 328
TasI AATT 3 cut(s) 165, 374, 435
TfiI GAWTC 2 cut(s) 17, 115
Tru1I TTAA 4 cut(s) 36, 111, 222, 255
Tru9I TTAA 4 cut(s) 36, 111, 222, 255
TspDTI ATGAA 2 cut(s) 85, 327
XagI CCTNNNNNAGG 1 cut(s) 315
XceI RCATGY 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.