Rw4G022130

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
47266032 .. 47268166
2135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G022130.1

Sequence Viewer

Length: 642 bp
ATGGCTCTATTTTTTCTTGCTGAAAATGGTGCTACCTTAGGTATCTCATCTGGTATTGTGGAAGCTGTATATATCATTGGCTTCCCCAAAGAATCCGACCTCAAATTGACCACTACCACTACCAAACTCAAGCTTCCAGAAGGTTTGACTGGCCTCCTCGTTAAGAACCTCTACTTATCCTGCGATCCTTACATGCGAAGCCGTATGACCAAGCAGAAGGAAGGGGGTGAGGAGGGGGATAGATGTGGTTTGATTGGAATGTTGCAGCCTGTAATTGGTTTAGGAGTGGCTAAAGTCCTGGACTATGGGGATCTAAAGTTTAAGCCAGGGGACTTGGTTTGGGGTCACACTAGTTGGGAAGAATATAGTGTCATCACCACAGAGTCTCTGATTAAGATTCACCACACTGATGTGCCTCTCTCTTACTATACTGGACTTCTCGGTATGCCTGGAGTGACTGCTTATGCTGGTTTTTATGAGATCTGCTCTCCTAAGAAAGGAGAGACAATCTACATTTTAGCCGCATCTGGAGCGTTAACAAGTTGTTATGTTGTTGGGAGTGCTGGAAGCAAGGAAAAGGTGAGTCACTGGTACTCCACAAGACGTGCATATATACAGACTAAAACTTTATTCTTTGGATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

213

Amino Acids

23.23

Weight (kDa)

7.63

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 27 - 133 8.8e-18 N-terminal domain of oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 522
AclWI GGATC 2 cut(s) 179, 318
AfaI GTAC 1 cut(s) 593
AfiI CCNNNNNNNGG 2 cut(s) 275, 497
AhlI ACTAGT 1 cut(s) 350
AjiI CACGTC 1 cut(s) 605
AjnI CCWGG 3 cut(s) 297, 325, 448
AleI CACNNNNGTG 1 cut(s) 410
AluBI AGCT 2 cut(s) 65, 133
AluI AGCT 2 cut(s) 65, 133
Alw26I GTCTC 2 cut(s) 390, 497
AlwI GGATC 2 cut(s) 179, 318
AoxI GGCC 1 cut(s) 151
ApeKI GCWGC 1 cut(s) 265
AsuHPI GGTGA 4 cut(s) 239, 367, 392, 592
AxyI CCTNAGG 1 cut(s) 37
BbvI GCAGC 1 cut(s) 277
BceAI ACGGC 1 cut(s) 186
BciT130I CCWGG 3 cut(s) 299, 327, 450
BcoDI GTCTC 2 cut(s) 390, 497
BcuI ACTAGT 1 cut(s) 350
BfaI CTAG 1 cut(s) 351
BglII AGATCT 1 cut(s) 480
BisI GCNGC 2 cut(s) 266, 522
BlsI GCNGC 2 cut(s) 267, 523
Bme1390I CCNGG 3 cut(s) 299, 327, 450
BmgBI CACGTC 1 cut(s) 605
BmrFI CCNGG 3 cut(s) 299, 327, 450
BmsI GCATC 1 cut(s) 533
BplI GAGNNNNNCTC 2 cut(s) 470, 502
BpmI CTGGAG 2 cut(s) 471, 549
BpuEI CTTGAG 1 cut(s) 113
BsaJI CCNNGG 1 cut(s) 326
BsaXI ACNNNNNCTCC 2 cut(s) 578, 608
Bsc4I CCNNNNNNNGG 2 cut(s) 275, 497
Bse1I ACTGG 3 cut(s) 154, 436, 593
Bse21I CCTNAGG 1 cut(s) 37
BseBI CCWGG 3 cut(s) 299, 327, 450
BseDI CCNNGG 1 cut(s) 326
BseLI CCNNNNNNNGG 2 cut(s) 275, 497
BseNI ACTGG 3 cut(s) 154, 436, 593
BseRI GAGGAG 2 cut(s) 146, 245
BseXI GCAGC 1 cut(s) 277
BshFI GGCC 1 cut(s) 153
BslFI GGGAC 1 cut(s) 344
BslI CCNNNNNNNGG 2 cut(s) 275, 497
BsmAI GTCTC 2 cut(s) 390, 497
BsmFI GGGAC 1 cut(s) 344
BsnI GGCC 1 cut(s) 153
Bsp143I GATC 3 cut(s) 184, 310, 480
BspACI CCGC 1 cut(s) 522
BspANI GGCC 1 cut(s) 153
BspPI GGATC 2 cut(s) 179, 318
BsrI ACTGG 3 cut(s) 154, 436, 593
BssECI CCNNGG 1 cut(s) 326
BssMI GATC 3 cut(s) 184, 310, 480
Bst2UI CCWGG 3 cut(s) 299, 327, 450
BstDEI CTNAG 2 cut(s) 37, 492
BstENI CCTNNNNNAGG 1 cut(s) 495
BstKTI GATC 3 cut(s) 187, 313, 483
BstMAI GTCTC 2 cut(s) 390, 497
BstMBI GATC 3 cut(s) 184, 310, 480
BstMWI GCNNNNNNNGC 1 cut(s) 530
BstNI CCWGG 3 cut(s) 299, 327, 450
BstNSI RCATGY 1 cut(s) 196
BstSCI CCNGG 3 cut(s) 297, 325, 448
BstV1I GCAGC 1 cut(s) 277
BstX2I RGATCY 2 cut(s) 310, 480
BstYI RGATCY 2 cut(s) 310, 480
Bsu36I CCTNAGG 1 cut(s) 37
BsuRI GGCC 1 cut(s) 153
BtrI CACGTC 1 cut(s) 605
BtsIMutI CAGTG 2 cut(s) 405, 586
Csp6I GTAC 1 cut(s) 592
CviAII CATG 1 cut(s) 193
CviQI GTAC 1 cut(s) 592
DdeI CTNAG 2 cut(s) 37, 492
DpnI GATC 3 cut(s) 186, 312, 482
DpnII GATC 3 cut(s) 184, 310, 480
Eco81I CCTNAGG 1 cut(s) 37
EcoNI CCTNNNNNAGG 1 cut(s) 495
EcoRII CCWGG 3 cut(s) 297, 325, 448
FaeI CATG 1 cut(s) 196
FaqI GGGAC 1 cut(s) 344
FatI CATG 1 cut(s) 192
Fnu4HI GCNGC 2 cut(s) 266, 522
Fsp4HI GCNGC 2 cut(s) 266, 522
FspBI CTAG 1 cut(s) 351
GluI GCNGC 2 cut(s) 266, 522
GsuI CTGGAG 2 cut(s) 471, 549
HaeIII GGCC 1 cut(s) 153
Hin1II CATG 1 cut(s) 196
HincII GTYRAC 1 cut(s) 537
HindII GTYRAC 1 cut(s) 537
HindIII AAGCTT 1 cut(s) 131
HinfI GANTC 4 cut(s) 92, 383, 397, 583
HpaI GTTAAC 1 cut(s) 537
HphI GGTGA 4 cut(s) 239, 367, 392, 592
Hpy166II GTNNAC 1 cut(s) 537
Hpy188I TCNGA 2 cut(s) 97, 390
Hpy188III TCNNGA 2 cut(s) 137, 528
Hpy8I GTNNAC 1 cut(s) 537
HpyAV CCTTC 3 cut(s) 134, 211, 215
HpyCH4IV ACGT 1 cut(s) 604
HpyCH4V TGCA 2 cut(s) 265, 608
HpyF10VI GCNNNNNNNGC 1 cut(s) 530
HpyF3I CTNAG 2 cut(s) 37, 492
HpySE526I ACGT 1 cut(s) 604
Hsp92II CATG 1 cut(s) 196
KspAI GTTAAC 1 cut(s) 537
Kzo9I GATC 3 cut(s) 184, 310, 480
LmnI GCTCC 1 cut(s) 530
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 1 cut(s) 533
MaeI CTAG 1 cut(s) 351
MaeII ACGT 1 cut(s) 604
MaeIII GTNAC 3 cut(s) 344, 454, 584
MalI GATC 3 cut(s) 186, 312, 482
MboI GATC 3 cut(s) 184, 310, 480
MboII GAAGA 1 cut(s) 371
MflI RGATCY 2 cut(s) 310, 480
MluCI AATT 2 cut(s) 104, 273
MlyI GAGTC 2 cut(s) 392, 592
MmeI TCCRAC 1 cut(s) 120
MnlI CCTC 7 cut(s) 110, 164, 167, 179, 223, 226, 426
MseI TTAA 4 cut(s) 162, 321, 393, 536
MslI CAYNNNNRTG 2 cut(s) 408, 410
MspR9I CCNGG 3 cut(s) 299, 327, 450
MvaI CCWGG 3 cut(s) 299, 327, 450
MwoI GCNNNNNNNGC 1 cut(s) 530
NdeII GATC 3 cut(s) 184, 310, 480
NlaIII CATG 1 cut(s) 196
NmuCI GTSAC 3 cut(s) 344, 454, 584
NspI RCATGY 1 cut(s) 196
OliI CACNNNNGTG 1 cut(s) 410
PfeI GAWTC 2 cut(s) 92, 397
PfoI TCCNGGA 1 cut(s) 297
PkrI GCNGC 2 cut(s) 267, 523
PleI GAGTC 2 cut(s) 391, 591
PpsI GAGTC 2 cut(s) 391, 591
Psp6I CCWGG 3 cut(s) 297, 325, 448
PspGI CCWGG 3 cut(s) 297, 325, 448
PsuI RGATCY 2 cut(s) 310, 480
RsaI GTAC 1 cut(s) 593
RsaNI GTAC 1 cut(s) 592
RseI CAYNNNNRTG 2 cut(s) 408, 410
SaqAI TTAA 4 cut(s) 162, 321, 393, 536
SatI GCNGC 2 cut(s) 266, 522
Sau3AI GATC 3 cut(s) 184, 310, 480
SchI GAGTC 2 cut(s) 392, 592
ScrFI CCNGG 3 cut(s) 299, 327, 450
SetI ASST 9 cut(s) 38, 43, 67, 102, 135, 145, 171, 582, 607
SfaNI GCATC 1 cut(s) 533
SmiMI CAYNNNNRTG 2 cut(s) 408, 410
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
SpeI ACTAGT 1 cut(s) 350
Sse9I AATT 2 cut(s) 104, 273
SsiI CCGC 1 cut(s) 522
SspMI CTAG 1 cut(s) 351
StyD4I CCNGG 3 cut(s) 297, 325, 448
TaiI ACGT 1 cut(s) 607
TasI AATT 2 cut(s) 104, 273
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 2 cut(s) 92, 397
Tru1I TTAA 4 cut(s) 162, 321, 393, 536
Tru9I TTAA 4 cut(s) 162, 321, 393, 536
TscAI CASTG 2 cut(s) 412, 593
TseFI GTSAC 3 cut(s) 344, 454, 584
TseI GCWGC 1 cut(s) 265
Tsp45I GTSAC 3 cut(s) 344, 454, 584
TspRI CASTG 2 cut(s) 412, 593
XagI CCTNNNNNAGG 1 cut(s) 495
XceI RCATGY 1 cut(s) 196
XspI CTAG 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.