Rroxscaffold_2G00155830

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000196
Physical Location & Seq
Reverse (-)
92328360 .. 92329016
657 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00155830.1

Sequence Viewer

Length: 303 bp
ATGGAGGGATTCATAGTCGCTGATCACTTTCACCTCTATCCAAAGTATATTGAATTGGTGATACCTTACATCAAAGAAGGCAAAATAGTGTCTGTGGAAGACGTGGCTGACGGCATTGACAATGCTCCCGCTGCTCTCTTAGGCCTCTTCGCCGGACGCAACGAACAAGCAGGTGGCGTTGAGGGACCAAATGTGCCAGAGTCTCCCACTCTAAGAATCAAGGCTCGAGTCTGCCCCAGCAGCTCTGTTTTGCATCTTCAAAGGCCGCAAGGCTGGAAAACAGGTGGGTGCAGTTTCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

100

Amino Acids

10.76

Weight (kDa)

5.85

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 161
Acc36I ACCTGC 1 cut(s) 161
AciI CCGC 2 cut(s) 129, 266
AgsI TTSAA 2 cut(s) 53, 260
AjiI CACGTC 1 cut(s) 103
AluBI AGCT 1 cut(s) 243
AluI AGCT 1 cut(s) 243
Alw26I GTCTC 1 cut(s) 207
Ama87I CYCGRG 1 cut(s) 225
AoxI GGCC 2 cut(s) 142, 263
ApeKI GCWGC 2 cut(s) 131, 240
AspS9I GGNCC 1 cut(s) 185
AsuHPI GGTGA 2 cut(s) 23, 70
AvaI CYCGRG 1 cut(s) 225
AvaII GGWCC 1 cut(s) 185
BbsI GAAGAC 1 cut(s) 105
BbvI GCAGC 2 cut(s) 118, 252
BceAI ACGGC 1 cut(s) 127
BclI TGATCA 1 cut(s) 22
BcoDI GTCTC 1 cut(s) 207
BfuAI ACCTGC 1 cut(s) 161
BisI GCNGC 3 cut(s) 132, 241, 266
BlsI GCNGC 3 cut(s) 133, 242, 267
Bme18I GGWCC 1 cut(s) 185
BmeT110I CYCGRG 1 cut(s) 225
BmgBI CACGTC 1 cut(s) 103
BmgT120I GGNCC 1 cut(s) 185
BmiI GGNNCC 1 cut(s) 186
BmsI GCATC 1 cut(s) 262
BpiI GAAGAC 1 cut(s) 105
BseXI GCAGC 2 cut(s) 118, 252
BseYI CCCAGC 1 cut(s) 236
BshFI GGCC 2 cut(s) 144, 265
BsiHKCI CYCGRG 1 cut(s) 225
BsiSI CCGG 1 cut(s) 153
BslFI GGGAC 1 cut(s) 198
BsmAI GTCTC 1 cut(s) 207
BsmFI GGGAC 1 cut(s) 198
BsnI GGCC 2 cut(s) 144, 265
BsoBI CYCGRG 1 cut(s) 225
Bsp143I GATC 1 cut(s) 22
BspACI CCGC 2 cut(s) 129, 266
BspANI GGCC 2 cut(s) 144, 265
BspLI GGNNCC 1 cut(s) 186
BspMI ACCTGC 1 cut(s) 161
BssMI GATC 1 cut(s) 22
Bst6I CTCTTC 1 cut(s) 152
BstDEI CTNAG 2 cut(s) 139, 212
BstKTI GATC 1 cut(s) 25
BstMAI GTCTC 1 cut(s) 207
BstMBI GATC 1 cut(s) 22
BstMWI GCNNNNNNNGC 2 cut(s) 131, 240
BstV1I GCAGC 2 cut(s) 118, 252
BstV2I GAAGAC 1 cut(s) 105
BsuRI GGCC 2 cut(s) 144, 265
BtrI CACGTC 1 cut(s) 103
BveI ACCTGC 1 cut(s) 161
Cfr13I GGNCC 1 cut(s) 185
CseI GACGC 1 cut(s) 165
CviJI RGCY 6 cut(s) 107, 144, 224, 243, 265, 273
CviKI_1 RGCY 6 cut(s) 107, 144, 224, 243, 265, 273
DdeI CTNAG 2 cut(s) 139, 212
DpnI GATC 1 cut(s) 24
DpnII GATC 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco147I AGGCCT 1 cut(s) 144
Eco47I GGWCC 1 cut(s) 185
Eco88I CYCGRG 1 cut(s) 225
FaiI YATR 2 cut(s) 14, 48
FaqI GGGAC 1 cut(s) 198
FauI CCCGC 1 cut(s) 136
FbaI TGATCA 1 cut(s) 22
Fnu4HI GCNGC 3 cut(s) 132, 241, 266
Fsp4HI GCNGC 3 cut(s) 132, 241, 266
GluI GCNGC 3 cut(s) 132, 241, 266
GsaI CCCAGC 1 cut(s) 240
HaeIII GGCC 2 cut(s) 144, 265
HapII CCGG 1 cut(s) 153
HgaI GACGC 1 cut(s) 165
HinfI GANTC 4 cut(s) 9, 200, 216, 228
HpaII CCGG 1 cut(s) 153
HphI GGTGA 2 cut(s) 23, 70
Hpy188III TCNNGA 1 cut(s) 300
HpyAV CCTTC 1 cut(s) 71
HpyCH4IV ACGT 1 cut(s) 102
HpyCH4V TGCA 2 cut(s) 253, 291
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 240
HpyF3I CTNAG 2 cut(s) 139, 212
HpySE526I ACGT 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 1 cut(s) 22
LmnI GCTCC 1 cut(s) 130
LpnPI CCDG 6 cut(s) 156, 166, 210, 250, 259, 267
Lsp1109I GCAGC 2 cut(s) 118, 252
LweI GCATC 1 cut(s) 262
MaeII ACGT 1 cut(s) 102
MalI GATC 1 cut(s) 24
MboI GATC 1 cut(s) 22
MboII GAAGA 3 cut(s) 110, 139, 248
MluCI AATT 1 cut(s) 53
MlyI GAGTC 2 cut(s) 209, 237
MnlI CCTC 3 cut(s) 44, 155, 175
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 1 cut(s) 153
MwoI GCNNNNNNNGC 2 cut(s) 131, 240
NdeII GATC 1 cut(s) 22
NlaIV GGNNCC 1 cut(s) 186
PaeR7I CTCGAG 1 cut(s) 225
PaqCI CACCTGC 1 cut(s) 161
PceI AGGCCT 1 cut(s) 144
PfeI GAWTC 2 cut(s) 9, 216
PkrI GCNGC 3 cut(s) 133, 242, 267
PleI GAGTC 2 cut(s) 208, 236
PpsI GAGTC 2 cut(s) 208, 236
PspFI CCCAGC 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 186
PspPI GGNCC 1 cut(s) 185
PspXI VCTCGAGB 1 cut(s) 225
SatI GCNGC 3 cut(s) 132, 241, 266
Sau3AI GATC 1 cut(s) 22
Sau96I GGNCC 1 cut(s) 185
SchI GAGTC 2 cut(s) 209, 237
SetI ASST 6 cut(s) 36, 67, 105, 175, 245, 286
SfaNI GCATC 1 cut(s) 262
Sfr274I CTCGAG 1 cut(s) 225
SinI GGWCC 1 cut(s) 185
SlaI CTCGAG 1 cut(s) 225
SmlI CTYRAG 1 cut(s) 225
SmoI CTYRAG 1 cut(s) 225
Sse9I AATT 1 cut(s) 53
SseBI AGGCCT 1 cut(s) 144
SsiI CCGC 2 cut(s) 129, 266
StuI AGGCCT 1 cut(s) 144
TaiI ACGT 1 cut(s) 105
TaqI TCGA 1 cut(s) 226
TasI AATT 1 cut(s) 53
TauI GCSGC 1 cut(s) 268
TfiI GAWTC 2 cut(s) 9, 216
TseI GCWGC 2 cut(s) 131, 240
VpaK11BI GGWCC 1 cut(s) 185
XhoI CTCGAG 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.