Rmu_sc0002352.1_g000003

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002352.1
OG0000196
Physical Location & Seq
Reverse (-)
8665 .. 9987
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002352.1_g000003.1.cds

Sequence Viewer

Length: 444 bp
atgcaaggttttgttgttttgaattactatcatctttacgagaagtttcttgaaacggttctgcttgacataaaaaaaggaaagattacatatgtggaagatgtagttgaaggcctcgaaagtgctccatcggccctgattggactctttacaggtcgcaatgtcggaaagcaggagcatcttatgagtgggaatcctaccgaaggcgttcaaaacttgatgtacatgattgggaatcgggtgcgcatggagggattcatagtcgctgatcactttcacctctatccaaagtatcttgaattggtgataccttacatcaaagaaggcaaaatagtgtctgtggaagacgtggctgacggcattgacaatgctcccgctgctctcgtaggcctcttcgccggacgcaacgttggaaagcaacttgttttagtttcccgcgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

147

Amino Acids

16.36

Weight (kDa)

5.55

Isoelectric Point (pI)

23.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 245
AccII CGCG 1 cut(s) 438
AciI CCGC 2 cut(s) 375, 436
AclI AACGTT 1 cut(s) 408
AfaI GTAC 1 cut(s) 224
AfiI CCNNNNNNNGG 1 cut(s) 203
AgsI TTSAA 5 cut(s) 22, 53, 110, 212, 299
AjiI CACGTC 1 cut(s) 349
Alw21I GWGCWC 1 cut(s) 127
AoxI GGCC 3 cut(s) 112, 132, 388
ApeKI GCWGC 1 cut(s) 377
Asp700I GAANNNNTTC 2 cut(s) 57, 207
AspLEI GCGC 1 cut(s) 246
AspS9I GGNCC 1 cut(s) 133
AsuHPI GGTGA 2 cut(s) 269, 316
BbsI GAAGAC 1 cut(s) 351
Bbv12I GWGCWC 1 cut(s) 127
BbvI GCAGC 1 cut(s) 364
BccI CCATC 1 cut(s) 136
BceAI ACGGC 1 cut(s) 373
BclI TGATCA 1 cut(s) 268
BisI GCNGC 1 cut(s) 378
BlsI GCNGC 1 cut(s) 379
BmgBI CACGTC 1 cut(s) 349
BmgT120I GGNCC 1 cut(s) 133
BmsI GCATC 1 cut(s) 187
BpiI GAAGAC 1 cut(s) 351
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse3DI GCAATG 1 cut(s) 166
BseLI CCNNNNNNNGG 1 cut(s) 203
BseMI GCAATG 1 cut(s) 166
BseXI GCAGC 1 cut(s) 364
Bsh1236I CGCG 1 cut(s) 438
BshFI GGCC 3 cut(s) 114, 134, 390
BsiHKAI GWGCWC 1 cut(s) 127
BsiSI CCGG 1 cut(s) 399
BslI CCNNNNNNNGG 1 cut(s) 203
BsnI GGCC 3 cut(s) 114, 134, 390
Bsp1286I GDGCHC 1 cut(s) 127
Bsp1407I TGTACA 1 cut(s) 222
Bsp143I GATC 1 cut(s) 268
BspACI CCGC 2 cut(s) 375, 436
BspANI GGCC 3 cut(s) 114, 134, 390
BspFNI CGCG 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 166
BsrGI TGTACA 1 cut(s) 222
BssMI GATC 1 cut(s) 268
Bst4CI ACNGT 1 cut(s) 58
Bst6I CTCTTC 1 cut(s) 398
BstAUI TGTACA 1 cut(s) 222
BstENI CCTNNNNNAGG 1 cut(s) 201
BstFNI CGCG 1 cut(s) 438
BstHHI GCGC 1 cut(s) 246
BstKTI GATC 1 cut(s) 271
BstMBI GATC 1 cut(s) 268
BstMWI GCNNNNNNNGC 2 cut(s) 131, 377
BstUI CGCG 1 cut(s) 438
BstV1I GCAGC 1 cut(s) 364
BstV2I GAAGAC 1 cut(s) 351
BsuRI GGCC 3 cut(s) 114, 134, 390
BtrI CACGTC 1 cut(s) 349
CfoI GCGC 1 cut(s) 246
Cfr13I GGNCC 1 cut(s) 133
CseI GACGC 1 cut(s) 411
Csp6I GTAC 1 cut(s) 223
CviAII CATG 2 cut(s) 226, 247
CviJI RGCY 4 cut(s) 114, 134, 353, 390
CviKI_1 RGCY 4 cut(s) 114, 134, 353, 390
CviQI GTAC 1 cut(s) 223
DpnI GATC 1 cut(s) 270
DpnII GATC 1 cut(s) 268
Eam1104I CTCTTC 1 cut(s) 398
EarI CTCTTC 1 cut(s) 398
Eco147I AGGCCT 2 cut(s) 114, 390
EcoNI CCTNNNNNAGG 1 cut(s) 201
FaeI CATG 2 cut(s) 229, 250
FaiI YATR 7 cut(s) 71, 91, 93, 185, 227, 248, 260
FatI CATG 2 cut(s) 225, 246
FauI CCCGC 1 cut(s) 382
FauNDI CATATG 1 cut(s) 91
FbaI TGATCA 1 cut(s) 268
Fnu4HI GCNGC 1 cut(s) 378
Fsp4HI GCNGC 1 cut(s) 378
FspAI RTGCGCAY 1 cut(s) 245
FspI TGCGCA 1 cut(s) 245
GlaI GCGC 1 cut(s) 245
GluI GCNGC 1 cut(s) 378
HaeIII GGCC 3 cut(s) 114, 134, 390
HapII CCGG 1 cut(s) 399
HgaI GACGC 1 cut(s) 411
HhaI GCGC 1 cut(s) 246
Hin1II CATG 2 cut(s) 229, 250
Hin6I GCGC 1 cut(s) 244
HinP1I GCGC 1 cut(s) 244
HinfI GANTC 4 cut(s) 144, 193, 235, 255
HpaII CCGG 1 cut(s) 399
HphI GGTGA 2 cut(s) 269, 316
Hpy188I TCNGA 1 cut(s) 167
Hpy188III TCNNGA 2 cut(s) 50, 296
HpyAV CCTTC 3 cut(s) 104, 197, 317
HpyCH4III ACNGT 1 cut(s) 58
HpyCH4IV ACGT 2 cut(s) 348, 408
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 377
HpySE526I ACGT 2 cut(s) 348, 408
Hsp92II CATG 2 cut(s) 229, 250
HspAI GCGC 1 cut(s) 244
Ksp22I TGATCA 1 cut(s) 268
Kzo9I GATC 1 cut(s) 268
LmnI GCTCC 3 cut(s) 130, 175, 376
LpnPI CCDG 4 cut(s) 138, 149, 158, 412
Lsp1109I GCAGC 1 cut(s) 364
LweI GCATC 1 cut(s) 187
MaeII ACGT 2 cut(s) 348, 408
MalI GATC 1 cut(s) 270
MboI GATC 1 cut(s) 268
MboII GAAGA 3 cut(s) 110, 356, 385
MhlI GDGCHC 1 cut(s) 127
MluCI AATT 2 cut(s) 22, 299
MlyI GAGTC 1 cut(s) 138
MmeI TCCRAC 2 cut(s) 145, 391
MnlI CCTC 4 cut(s) 125, 244, 290, 401
MroXI GAANNNNTTC 2 cut(s) 57, 207
MspA1I CMGCKG 1 cut(s) 377
MspI CCGG 1 cut(s) 399
MvnI CGCG 1 cut(s) 438
MwoI GCNNNNNNNGC 2 cut(s) 131, 377
NdeI CATATG 1 cut(s) 91
NdeII GATC 1 cut(s) 268
NlaIII CATG 2 cut(s) 229, 250
NsbI TGCGCA 1 cut(s) 245
PceI AGGCCT 2 cut(s) 114, 390
PdmI GAANNNNTTC 2 cut(s) 57, 207
PfeI GAWTC 3 cut(s) 193, 235, 255
PkrI GCNGC 1 cut(s) 379
PleI GAGTC 1 cut(s) 138
PpsI GAGTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 408
PspPI GGNCC 1 cut(s) 133
RsaI GTAC 1 cut(s) 224
RsaNI GTAC 1 cut(s) 223
SatI GCNGC 1 cut(s) 378
Sau3AI GATC 1 cut(s) 268
Sau96I GGNCC 1 cut(s) 133
SchI GAGTC 1 cut(s) 138
SduI GDGCHC 1 cut(s) 127
SetI ASST 6 cut(s) 10, 157, 282, 313, 351, 411
SfaNI GCATC 1 cut(s) 187
Sse9I AATT 2 cut(s) 22, 299
SseBI AGGCCT 2 cut(s) 114, 390
SsiI CCGC 2 cut(s) 375, 436
StuI AGGCCT 2 cut(s) 114, 390
TaaI ACNGT 1 cut(s) 58
TaiI ACGT 2 cut(s) 351, 411
TaqI TCGA 1 cut(s) 117
TasI AATT 2 cut(s) 22, 299
TatI WGTACW 1 cut(s) 222
TfiI GAWTC 3 cut(s) 193, 235, 255
TseI GCWGC 1 cut(s) 377
TspDTI ATGAA 1 cut(s) 247
XagI CCTNNNNNAGG 1 cut(s) 201
XmnI GAANNNNTTC 2 cut(s) 57, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.