FvH4_1g26520

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
18335892 .. 18342131
6240 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g26520.t1

Sequence Viewer

Length: 1047 bp
ATGGCCAGTGGAGTAGCGGAAGTGAGGAACAAGCAGGTGATATTCGGAGACTATGTCACCGGCTACGCCAAAGAATCCGACCTGAAATTGACCACTACGACAACCAAACTGAAGCTTCCAGAAGGTTCCACTGGCCTTCTCGTCAAGAACCTCTACTTGTCCTGCGATCCCTATATGCGAGGCCGTATGAGCAAGAACGGCACACTCAGTTATGTCGAAACCTTCAAGCCCGGCACGCCTGTAGTTGGTCTTGGAGTGGCTAAAGTGCTGGAATCTGGGGATCCAAAGTTTAAGCCAGGCGACTTGGTTTCGGGTCAAACTGGTTGGGAAGAGTATAGTGTCATCACGACAGAGTTTCTGATTAAGATTCACCACATTGATCATGTGCCTCTCTCTTACCATATTGGAGTTCTCGGTATGCCTGGAATGACTGCTTATGCTGGTTTTTATGAGGTTTGCTGCCCTAAGAAAGGAGAGACGGTGTACATTTCAGCTGCATCTGGAGCAGTAGGTCAGCTTGTTGGCCAATTTGCAAAGTTGACAGGTTGCTATGTTGTTGGGAGTGCTGGAAGCAAGGAAAAGGTTGATTTGCTGAAGAATAAATTTGGATTTGATGAGGCATTCAACTATAAAGAAGAACCAGACATGGATGCAGCTTTAAGAAGGTACTTTCCTGATGGGATTGACATCTACTTTGAAAATGTGGGAGGAAAGATGCTGGATGCAGTGCTACCAAACATGAGGCTGAAAGGGCGAATAGCAGTGTGTGGGATGATCTCACAGTATAACCAGCTGGAGCGACCTGAAGGCATCCATAATCTGATGTCTCTGATTGTTAAGCAGGTCCGCATGGAAGGATTCCGGGTCTTCAGTTACTATCATCTGTATGGAAAGTTTCTTGAAACTATGTTGCCTTACATAAAAGAAGGGAAGATTACATATGTGGAAGATGTACTTGAAGGCCTTGAGAACGCTCCGGCGGCTCTAATGGGGCTCTTTGCTGGCCGCAATGTGGGAAAGCAGGTGGTTCTAGTTTCCAGGGAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

349

Amino Acids

38.35

Weight (kDa)

7.59

Isoelectric Point (pI)

29.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 11 - 123 8.1e-26 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 169 - 295 2.9e-23 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 203 - 343 5.2e-09 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 25, 1012
Acc36I ACCTGC 3 cut(s) 25, 832, 1012
AciI CCGC 4 cut(s) 17, 847, 980, 1006
AclWI GGATC 3 cut(s) 161, 275, 288
AcoI YGGCCR 3 cut(s) 3, 523, 1003
AcsI RAATTY 1 cut(s) 602
AcuI CTGAAG 4 cut(s) 131, 614, 825, 853
AfaI GTAC 3 cut(s) 485, 668, 954
AfiI CCNNNNNNNGG 3 cut(s) 245, 470, 1012
AgsI TTSAA 5 cut(s) 226, 625, 698, 902, 959
AjnI CCWGG 3 cut(s) 295, 421, 1037
AluBI AGCT 5 cut(s) 115, 494, 517, 656, 793
AluI AGCT 5 cut(s) 115, 494, 517, 656, 793
Alw26I GTCTC 3 cut(s) 42, 470, 831
AlwI GGATC 3 cut(s) 161, 275, 288
AoxI GGCC 6 cut(s) 3, 133, 181, 523, 961, 1003
ApeKI GCWGC 3 cut(s) 459, 494, 653
ApoI RAATTY 1 cut(s) 602
ArsI GACNNNNNNTTYG 2 cut(s) 677, 709
AspS9I GGNCC 1 cut(s) 844
AsuC2I CCSGG 2 cut(s) 231, 863
AsuHPI GGTGA 3 cut(s) 49, 49, 362
AvaII GGWCC 1 cut(s) 844
BalI TGGCCA 2 cut(s) 5, 525
BamHI GGATCC 1 cut(s) 280
BanII GRGCYC 1 cut(s) 996
BbsI GAAGAC 1 cut(s) 859
BbvI GCAGC 3 cut(s) 446, 481, 665
BccI CCATC 1 cut(s) 671
BceAI ACGGC 2 cut(s) 168, 214
BciT130I CCWGG 3 cut(s) 297, 423, 1039
BclI TGATCA 1 cut(s) 379
BcnI CCSGG 2 cut(s) 231, 863
BcoDI GTCTC 3 cut(s) 42, 470, 831
BfaI CTAG 1 cut(s) 1031
BfmI CTRYAG 1 cut(s) 240
BfuAI ACCTGC 3 cut(s) 25, 832, 1012
BisI GCNGC 5 cut(s) 460, 495, 654, 981, 1006
BlsI GCNGC 5 cut(s) 461, 496, 655, 982, 1007
Bme1390I CCNGG 5 cut(s) 231, 297, 423, 863, 1039
Bme18I GGWCC 1 cut(s) 844
BmgT120I GGNCC 1 cut(s) 844
BmiI GGNNCC 2 cut(s) 127, 282
BmrFI CCNGG 5 cut(s) 231, 297, 423, 863, 1039
BmsI GCATC 5 cut(s) 506, 640, 705, 712, 819
BpiI GAAGAC 1 cut(s) 859
BpmI CTGGAG 2 cut(s) 522, 815
BpuEI CTTGAG 1 cut(s) 986
BpuMI CCSGG 2 cut(s) 231, 863
BsaBI GATNNNNATC 1 cut(s) 686
BsaJI CCNNGG 1 cut(s) 1038
BsaXI ACNNNNNCTCC 4 cut(s) 39, 69, 465, 495
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 470, 1012
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 3 cut(s) 6, 136, 325
Bse3DI GCAATG 1 cut(s) 1015
Bse8I GATNNNNATC 1 cut(s) 686
BseBI CCWGG 3 cut(s) 297, 423, 1039
BseDI CCNNGG 1 cut(s) 1038
BseGI GGATG 4 cut(s) 655, 727, 777, 810
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 3 cut(s) 245, 470, 1012
BseMI GCAATG 1 cut(s) 1015
BseMII CTCAG 1 cut(s) 220
BseNI ACTGG 3 cut(s) 6, 136, 325
BseXI GCAGC 3 cut(s) 446, 481, 665
BshFI GGCC 6 cut(s) 5, 135, 183, 525, 963, 1005
BsiSI CCGG 4 cut(s) 60, 231, 862, 977
BslI CCNNNNNNNGG 3 cut(s) 245, 470, 1012
BsmAI GTCTC 3 cut(s) 42, 470, 831
BsmBI CGTCTC 1 cut(s) 470
BsmI GAATGC 1 cut(s) 620
BsnI GGCC 6 cut(s) 5, 135, 183, 525, 963, 1005
Bsp1286I GDGCHC 1 cut(s) 996
Bsp1407I TGTACA 1 cut(s) 483
Bsp143I GATC 4 cut(s) 166, 280, 379, 774
BspACI CCGC 4 cut(s) 17, 847, 980, 1006
BspANI GGCC 6 cut(s) 5, 135, 183, 525, 963, 1005
BspCNI CTCAG 1 cut(s) 219
BspLI GGNNCC 2 cut(s) 127, 282
BspMI ACCTGC 3 cut(s) 25, 832, 1012
BspPI GGATC 3 cut(s) 161, 275, 288
BsrDI GCAATG 1 cut(s) 1015
BsrFI RCCGGY 1 cut(s) 59
BsrGI TGTACA 1 cut(s) 483
BsrI ACTGG 3 cut(s) 6, 136, 325
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 1 cut(s) 1038
BssMI GATC 4 cut(s) 166, 280, 379, 774
Bst2UI CCWGG 3 cut(s) 297, 423, 1039
Bst4CI ACNGT 2 cut(s) 481, 783
Bst6I CTCTTC 1 cut(s) 324
BstAUI TGTACA 1 cut(s) 483
BstC8I GCNNGC 2 cut(s) 236, 1003
BstDEI CTNAG 2 cut(s) 206, 465
BstENI CCTNNNNNAGG 1 cut(s) 468
BstF5I GGATG 4 cut(s) 655, 727, 777, 810
BstKTI GATC 4 cut(s) 169, 283, 382, 777
BstMAI GTCTC 3 cut(s) 42, 470, 831
BstMBI GATC 4 cut(s) 166, 280, 379, 774
BstMWI GCNNNNNNNGC 6 cut(s) 189, 198, 235, 503, 751, 980
BstNI CCWGG 3 cut(s) 297, 423, 1039
BstSCI CCNGG 5 cut(s) 229, 295, 421, 861, 1037
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 3 cut(s) 446, 481, 665
BstV2I GAAGAC 1 cut(s) 859
BstX2I RGATCY 1 cut(s) 280
BstYI RGATCY 1 cut(s) 280
BsuRI GGCC 6 cut(s) 5, 135, 183, 525, 963, 1005
BtsCI GGATG 4 cut(s) 655, 727, 777, 810
BtsI GCAGTG 2 cut(s) 732, 768
BtsIMutI CAGTG 4 cut(s) 13, 129, 732, 768
BveI ACCTGC 3 cut(s) 25, 832, 1012
Cac8I GCNNGC 2 cut(s) 236, 1003
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 1 cut(s) 844
Csp6I GTAC 3 cut(s) 484, 667, 953
CviAII CATG 4 cut(s) 383, 646, 739, 850
CviQI GTAC 3 cut(s) 484, 667, 953
DdeI CTNAG 2 cut(s) 206, 465
DpnI GATC 4 cut(s) 168, 282, 381, 776
DpnII GATC 4 cut(s) 166, 280, 379, 774
EaeI YGGCCR 3 cut(s) 3, 523, 1003
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
Eco147I AGGCCT 1 cut(s) 963
Eco24I GRGCYC 1 cut(s) 996
Eco47I GGWCC 1 cut(s) 844
Eco57I CTGAAG 4 cut(s) 131, 614, 825, 853
EcoNI CCTNNNNNAGG 1 cut(s) 468
EcoRII CCWGG 3 cut(s) 295, 421, 1037
EcoT38I GRGCYC 1 cut(s) 996
Esp3I CGTCTC 1 cut(s) 470
FaeI CATG 4 cut(s) 386, 649, 742, 853
FalI AAGNNNNNCTT 2 cut(s) 939, 971
FatI CATG 4 cut(s) 382, 645, 738, 849
FauNDI CATATG 1 cut(s) 940
FbaI TGATCA 1 cut(s) 379
Fnu4HI GCNGC 5 cut(s) 460, 495, 654, 981, 1006
FokI GGATG 4 cut(s) 662, 734, 784, 797
FriOI GRGCYC 1 cut(s) 996
Fsp4HI GCNGC 5 cut(s) 460, 495, 654, 981, 1006
FspBI CTAG 1 cut(s) 1031
GluI GCNGC 5 cut(s) 460, 495, 654, 981, 1006
GsuI CTGGAG 2 cut(s) 522, 815
HaeIII GGCC 6 cut(s) 5, 135, 183, 525, 963, 1005
HapII CCGG 4 cut(s) 60, 231, 862, 977
Hin1II CATG 4 cut(s) 386, 649, 742, 853
HincII GTYRAC 1 cut(s) 540
HindII GTYRAC 1 cut(s) 540
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 4 cut(s) 74, 272, 367, 858
HpaII CCGG 4 cut(s) 60, 231, 862, 977
HphI GGTGA 3 cut(s) 49, 49, 362
Hpy166II GTNNAC 2 cut(s) 484, 540
Hpy188I TCNGA 5 cut(s) 47, 79, 360, 822, 831
Hpy188III TCNNGA 6 cut(s) 119, 145, 346, 501, 674, 899
Hpy8I GTNNAC 2 cut(s) 484, 540
HpyAV CCTTC 8 cut(s) 116, 146, 232, 657, 800, 848, 920, 953
HpyCH4III ACNGT 2 cut(s) 481, 783
HpyCH4V TGCA 4 cut(s) 497, 533, 653, 725
HpyF10VI GCNNNNNNNGC 6 cut(s) 189, 198, 235, 503, 751, 980
HpyF3I CTNAG 2 cut(s) 206, 465
Hsp92II CATG 4 cut(s) 386, 649, 742, 853
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 4 cut(s) 166, 280, 379, 774
LmnI GCTCC 3 cut(s) 503, 796, 979
Lsp1109I GCAGC 3 cut(s) 446, 481, 665
LweI GCATC 5 cut(s) 506, 640, 705, 712, 819
MaeI CTAG 1 cut(s) 1031
MaeIII GTNAC 2 cut(s) 55, 872
MalI GATC 4 cut(s) 168, 282, 381, 776
MboI GATC 4 cut(s) 166, 280, 379, 774
MboII GAAGA 6 cut(s) 341, 607, 647, 859, 943, 959
MflI RGATCY 1 cut(s) 280
MhlI GDGCHC 1 cut(s) 996
MlsI TGGCCA 2 cut(s) 5, 525
MluCI AATT 3 cut(s) 86, 527, 602
MluNI TGGCCA 2 cut(s) 5, 525
MmeI TCCRAC 1 cut(s) 102
MnlI CCTC 8 cut(s) 18, 161, 173, 399, 445, 610, 701, 735
Mox20I TGGCCA 2 cut(s) 5, 525
MscI TGGCCA 2 cut(s) 5, 525
MseI TTAA 4 cut(s) 291, 363, 659, 837
MslI CAYNNNNRTG 1 cut(s) 885
Msp20I TGGCCA 2 cut(s) 5, 525
MspA1I CMGCKG 2 cut(s) 494, 793
MspI CCGG 4 cut(s) 60, 231, 862, 977
MspR9I CCNGG 5 cut(s) 231, 297, 423, 863, 1039
Mva1269I GAATGC 1 cut(s) 620
MvaI CCWGG 3 cut(s) 297, 423, 1039
MwoI GCNNNNNNNGC 6 cut(s) 189, 198, 235, 503, 751, 980
NciI CCSGG 2 cut(s) 231, 863
NdeI CATATG 1 cut(s) 940
NdeII GATC 4 cut(s) 166, 280, 379, 774
NlaIII CATG 4 cut(s) 386, 649, 742, 853
NlaIV GGNNCC 2 cut(s) 127, 282
NmuCI GTSAC 1 cut(s) 55
PaqCI CACCTGC 2 cut(s) 25, 1012
PceI AGGCCT 1 cut(s) 963
PctI GAATGC 1 cut(s) 620
PfeI GAWTC 4 cut(s) 74, 272, 367, 858
PflFI GACNNNGTC 1 cut(s) 53
PkrI GCNGC 5 cut(s) 461, 496, 655, 982, 1007
Psp6I CCWGG 3 cut(s) 295, 421, 1037
PspGI CCWGG 3 cut(s) 295, 421, 1037
PspN4I GGNNCC 2 cut(s) 127, 282
PspPI GGNCC 1 cut(s) 844
PsuI RGATCY 1 cut(s) 280
PsyI GACNNNGTC 1 cut(s) 53
PvuII CAGCTG 2 cut(s) 494, 793
RsaI GTAC 3 cut(s) 485, 668, 954
RsaNI GTAC 3 cut(s) 484, 667, 953
RseI CAYNNNNRTG 1 cut(s) 885
SaqAI TTAA 4 cut(s) 291, 363, 659, 837
SatI GCNGC 5 cut(s) 460, 495, 654, 981, 1006
Sau3AI GATC 4 cut(s) 166, 280, 379, 774
Sau96I GGNCC 1 cut(s) 844
ScrFI CCNGG 5 cut(s) 231, 297, 423, 863, 1039
SduI GDGCHC 1 cut(s) 996
SfaNI GCATC 5 cut(s) 506, 640, 705, 712, 819
SfcI CTRYAG 1 cut(s) 240
SinI GGWCC 1 cut(s) 844
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 1 cut(s) 965
SmoI CTYRAG 1 cut(s) 965
Sse9I AATT 3 cut(s) 86, 527, 602
SseBI AGGCCT 1 cut(s) 963
SsiI CCGC 4 cut(s) 17, 847, 980, 1006
SspMI CTAG 1 cut(s) 1031
StuI AGGCCT 1 cut(s) 963
StyD4I CCNGG 5 cut(s) 229, 295, 421, 861, 1037
TaaI ACNGT 2 cut(s) 481, 783
TaqI TCGA 1 cut(s) 216
TasI AATT 3 cut(s) 86, 527, 602
TatI WGTACW 2 cut(s) 483, 952
TauI GCSGC 2 cut(s) 983, 1008
TfiI GAWTC 4 cut(s) 74, 272, 367, 858
Tru1I TTAA 4 cut(s) 291, 363, 659, 837
Tru9I TTAA 4 cut(s) 291, 363, 659, 837
TscAI CASTG 4 cut(s) 13, 136, 732, 768
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 3 cut(s) 459, 494, 653
Tsp45I GTSAC 1 cut(s) 55
TspRI CASTG 4 cut(s) 13, 136, 732, 768
Tth111I GACNNNGTC 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 844
XagI CCTNNNNNAGG 1 cut(s) 468
XapI RAATTY 1 cut(s) 602
XspI CTAG 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.