Rh2DG004600

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
291114 .. 291311
198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG004600.1

Sequence Viewer

Length: 198 bp
ATGGAGGGATTCATAGTCGCTGATCACTTTCACCTCTATCCAAAGTATCTTGAATTGGTGATACCTTACATCAAAGAAGGCAAAATAGTGTCTGTGGAAGACGTGGCTGACGGCATTGACAATGCTCCCGCTGCTCTCGTAGGCCTCTTCGCCGGACGCAACGTTGGAAAGCAGCTTGTTTTAGTTTCCCGCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

65

Amino Acids

7.11

Weight (kDa)

5.14

Isoelectric Point (pI)

12.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 192
AciI CCGC 2 cut(s) 129, 190
AclI AACGTT 1 cut(s) 162
AgsI TTSAA 1 cut(s) 53
AjiI CACGTC 1 cut(s) 103
AluBI AGCT 1 cut(s) 175
AluI AGCT 1 cut(s) 175
AoxI GGCC 1 cut(s) 142
ApeKI GCWGC 2 cut(s) 131, 172
AsuHPI GGTGA 2 cut(s) 23, 70
BbsI GAAGAC 1 cut(s) 105
BbvI GCAGC 2 cut(s) 118, 184
BceAI ACGGC 1 cut(s) 127
BclI TGATCA 1 cut(s) 22
BisI GCNGC 2 cut(s) 132, 173
BlsI GCNGC 2 cut(s) 133, 174
BmgBI CACGTC 1 cut(s) 103
BpiI GAAGAC 1 cut(s) 105
BseXI GCAGC 2 cut(s) 118, 184
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 1 cut(s) 144
BsiSI CCGG 1 cut(s) 153
BsnI GGCC 1 cut(s) 144
Bsp143I GATC 1 cut(s) 22
BspACI CCGC 2 cut(s) 129, 190
BspANI GGCC 1 cut(s) 144
BspFNI CGCG 1 cut(s) 192
BssMI GATC 1 cut(s) 22
Bst6I CTCTTC 1 cut(s) 152
BstFNI CGCG 1 cut(s) 192
BstKTI GATC 1 cut(s) 25
BstMBI GATC 1 cut(s) 22
BstMWI GCNNNNNNNGC 1 cut(s) 131
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 2 cut(s) 118, 184
BstV2I GAAGAC 1 cut(s) 105
BsuRI GGCC 1 cut(s) 144
BtrI CACGTC 1 cut(s) 103
CseI GACGC 1 cut(s) 165
CviJI RGCY 3 cut(s) 107, 144, 175
CviKI_1 RGCY 3 cut(s) 107, 144, 175
DpnI GATC 1 cut(s) 24
DpnII GATC 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco147I AGGCCT 1 cut(s) 144
FaiI YATR 1 cut(s) 14
FauI CCCGC 1 cut(s) 136
FbaI TGATCA 1 cut(s) 22
Fnu4HI GCNGC 2 cut(s) 132, 173
Fsp4HI GCNGC 2 cut(s) 132, 173
GluI GCNGC 2 cut(s) 132, 173
HaeIII GGCC 1 cut(s) 144
HapII CCGG 1 cut(s) 153
HgaI GACGC 1 cut(s) 165
HinfI GANTC 1 cut(s) 9
HpaII CCGG 1 cut(s) 153
HphI GGTGA 2 cut(s) 23, 70
Hpy188III TCNNGA 1 cut(s) 50
HpyAV CCTTC 1 cut(s) 71
HpyCH4IV ACGT 2 cut(s) 102, 162
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
HpySE526I ACGT 2 cut(s) 102, 162
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 1 cut(s) 22
LmnI GCTCC 1 cut(s) 130
LpnPI CCDG 1 cut(s) 166
Lsp1109I GCAGC 2 cut(s) 118, 184
MaeII ACGT 2 cut(s) 102, 162
MalI GATC 1 cut(s) 24
MboI GATC 1 cut(s) 22
MboII GAAGA 2 cut(s) 110, 139
MluCI AATT 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 145
MnlI CCTC 2 cut(s) 44, 155
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 1 cut(s) 153
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 1 cut(s) 131
NdeII GATC 1 cut(s) 22
PceI AGGCCT 1 cut(s) 144
PfeI GAWTC 1 cut(s) 9
PkrI GCNGC 2 cut(s) 133, 174
Psp1406I AACGTT 1 cut(s) 162
SatI GCNGC 2 cut(s) 132, 173
Sau3AI GATC 1 cut(s) 22
SetI ASST 5 cut(s) 36, 67, 105, 165, 177
SgeI CNNG 6 cut(s) 62, 115, 140, 149, 165, 188
Sse9I AATT 1 cut(s) 53
SseBI AGGCCT 1 cut(s) 144
SsiI CCGC 2 cut(s) 129, 190
StuI AGGCCT 1 cut(s) 144
TaiI ACGT 2 cut(s) 105, 165
TasI AATT 1 cut(s) 53
TfiI GAWTC 1 cut(s) 9
TseI GCWGC 2 cut(s) 131, 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.