RLG00000015679

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
583119 .. 585592
2474 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015679

Sequence Viewer

Length: 1041 bp
ATGGCTAGTGGAGAAGAAGCAGTGAGGAACAAGCAGGTGATATTCGGAGACTATATCACCGGCTTCCCCAAAGAATCCGACCTCAAATTGACCACTGCCTCTACCAAACTCAAGCTTCCAGAAGGTTCGACTGGCCTCCTCGTCAAGAACCTCTACTTGTCCTGCGATCCTTACATGCGAAGCCGTATGACCAACCACGACAGGCCCACTTATGTCCAATCCTTCACACCCGGCTCGCCTGTAACTGGTTTGGGAGTGGCTAAAGTCCTGGAATCTGGGGATCCAAAGTTTAAGCCAGGGGACTTGGTTTGGGGTCACACTGGTTGGGAAGAATATAGTGTCATCACCACAGAGTCTCTGATTAAGATTCACCACACTGATGTGCCTCTCTCTTACTATACTGGACTTCTCGGTATGCCTGGAATGACTGCTTATGCTGGTTTTTATGAGATCTGCTCTCCTAAGAAAGGAGAGACAGTCTACATTTCAGCCGCATCTGGAGCGGTAGGTCAGCTTGTTGGCCAATTTGCAAAGTTAACAGGTTGTTATGTTGTTGGGAGTGCTGGAAGCAAGGAAAAGGTTGATCTGCTGAAGAACAAATTTGGATTTGACGAAGCTTTCAACTATAAAGACGAACCTGACCTAGATGCAGTTTTAAGAAGGTACTTTCCAGATGGTATTGACATTTACTTTGAAAATGTGGGGGGAAAGATGCTTGATGCAGTGCTACCAAACATGAGGCTGAAAGGGCGAATAGCTGTGTGTGGGATGATCTCACAGTACAACCTCGAGCGGCCTGAAGGCATACATAATTTGATGTCTCTGATTGTTAAGCAGGTCCGAATGGAAGGTTTCCTGGTCTTCAGTTACTATCATCTGTACGGAAAGTTTCTTGAAACAGTGTTGCCTTACATAAAAGAAGGGAAGATAACATATGTGGAAGATGTAGTTGAAGGCCTTGAGAATGCTCCAGCGGCTCTAATTGGGCTCTTTTCTGGCCGCAATGTGGGAAAGCAGGTGGTTGTAGTTTCCAGAGAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

347

Amino Acids

38.16

Weight (kDa)

6.35

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 11 - 123 6.4e-27 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 168 - 292 4.8e-23 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 202 - 341 7e-10 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 25, 1006
Acc36I ACCTGC 3 cut(s) 25, 826, 1006
AccBSI CCGCTC 2 cut(s) 503, 793
AccI GTMKAC 1 cut(s) 480
AciI CCGC 5 cut(s) 492, 503, 793, 974, 1000
AclWI GGATC 3 cut(s) 161, 275, 288
AcoI YGGCCR 2 cut(s) 520, 997
AcsI RAATTY 1 cut(s) 599
AcuI CTGAAG 3 cut(s) 611, 819, 847
AfaI GTAC 3 cut(s) 665, 782, 881
AfiI CCNNNNNNNGG 3 cut(s) 245, 467, 1006
AgsI TTSAA 4 cut(s) 622, 695, 896, 953
AjnI CCWGG 4 cut(s) 267, 295, 418, 855
AleI CACNNNNGTG 1 cut(s) 380
AluBI AGCT 4 cut(s) 115, 514, 617, 758
AluI AGCT 4 cut(s) 115, 514, 617, 758
Alw26I GTCTC 4 cut(s) 42, 360, 467, 825
AlwI GGATC 3 cut(s) 161, 275, 288
Ama87I CYCGRG 1 cut(s) 788
AoxI GGCC 6 cut(s) 133, 203, 520, 794, 955, 997
ApoI RAATTY 1 cut(s) 599
ArsI GACNNNNNNTTYG 2 cut(s) 674, 706
AspS9I GGNCC 2 cut(s) 204, 838
AsuC2I CCSGG 1 cut(s) 231
AsuHPI GGTGA 4 cut(s) 49, 49, 337, 362
AvaI CYCGRG 1 cut(s) 788
AvaII GGWCC 1 cut(s) 838
BalI TGGCCA 1 cut(s) 522
BamHI GGATCC 1 cut(s) 280
BanII GRGCYC 1 cut(s) 990
BbsI GAAGAC 1 cut(s) 853
BccI CCATC 1 cut(s) 668
BceAI ACGGC 1 cut(s) 168
BciT130I CCWGG 4 cut(s) 269, 297, 420, 857
BcnI CCSGG 1 cut(s) 231
BcoDI GTCTC 4 cut(s) 42, 360, 467, 825
BfaI CTAG 2 cut(s) 6, 644
BfuAI ACCTGC 3 cut(s) 25, 826, 1006
BglII AGATCT 1 cut(s) 450
BisI GCNGC 4 cut(s) 492, 794, 975, 1000
BlsI GCNGC 4 cut(s) 493, 795, 976, 1001
Bme1390I CCNGG 5 cut(s) 231, 269, 297, 420, 857
Bme18I GGWCC 1 cut(s) 838
BmeT110I CYCGRG 1 cut(s) 788
BmgT120I GGNCC 2 cut(s) 204, 838
BmiI GGNNCC 1 cut(s) 282
BmrFI CCNGG 5 cut(s) 231, 269, 297, 420, 857
BmsI GCATC 4 cut(s) 503, 637, 702, 709
BpiI GAAGAC 1 cut(s) 853
BplI GAGNNNNNCTC 2 cut(s) 440, 472
BpmI CTGGAG 2 cut(s) 519, 954
BpuEI CTTGAG 2 cut(s) 95, 980
BpuMI CCSGG 1 cut(s) 231
BsaJI CCNNGG 1 cut(s) 296
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 467, 1006
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 4 cut(s) 136, 250, 325, 406
Bse3DI GCAATG 1 cut(s) 1009
BseBI CCWGG 4 cut(s) 269, 297, 420, 857
BseDI CCNNGG 1 cut(s) 296
BseGI GGATG 1 cut(s) 774
BseLI CCNNNNNNNGG 3 cut(s) 245, 467, 1006
BseMI GCAATG 1 cut(s) 1009
BseNI ACTGG 4 cut(s) 136, 250, 325, 406
BseRI GAGGAG 1 cut(s) 128
BshFI GGCC 6 cut(s) 135, 205, 522, 796, 957, 999
BsiHKCI CYCGRG 1 cut(s) 788
BsiSI CCGG 2 cut(s) 60, 231
BslFI GGGAC 1 cut(s) 314
BslI CCNNNNNNNGG 3 cut(s) 245, 467, 1006
BsmAI GTCTC 4 cut(s) 42, 360, 467, 825
BsmFI GGGAC 1 cut(s) 314
BsmI GAATGC 1 cut(s) 970
BsnI GGCC 6 cut(s) 135, 205, 522, 796, 957, 999
BsoBI CYCGRG 1 cut(s) 788
Bsp1286I GDGCHC 1 cut(s) 990
Bsp143I GATC 5 cut(s) 166, 280, 450, 583, 771
BspACI CCGC 5 cut(s) 492, 503, 793, 974, 1000
BspANI GGCC 6 cut(s) 135, 205, 522, 796, 957, 999
BspLI GGNNCC 1 cut(s) 282
BspMI ACCTGC 3 cut(s) 25, 826, 1006
BspPI GGATC 3 cut(s) 161, 275, 288
BsrBI CCGCTC 2 cut(s) 503, 793
BsrDI GCAATG 1 cut(s) 1009
BsrFI RCCGGY 1 cut(s) 59
BsrI ACTGG 4 cut(s) 136, 250, 325, 406
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 1 cut(s) 296
BssMI GATC 5 cut(s) 166, 280, 450, 583, 771
Bst2UI CCWGG 4 cut(s) 269, 297, 420, 857
Bst4CI ACNGT 3 cut(s) 478, 780, 901
BstC8I GCNNGC 1 cut(s) 236
BstDEI CTNAG 1 cut(s) 462
BstENI CCTNNNNNAGG 1 cut(s) 465
BstF5I GGATG 1 cut(s) 774
BstKTI GATC 5 cut(s) 169, 283, 453, 586, 774
BstMAI GTCTC 4 cut(s) 42, 360, 467, 825
BstMBI GATC 5 cut(s) 166, 280, 450, 583, 771
BstMWI GCNNNNNNNGC 3 cut(s) 500, 748, 974
BstNI CCWGG 4 cut(s) 269, 297, 420, 857
BstNSI RCATGY 1 cut(s) 178
BstSCI CCNGG 5 cut(s) 229, 267, 295, 418, 855
BstV2I GAAGAC 1 cut(s) 853
BstX2I RGATCY 2 cut(s) 280, 450
BstYI RGATCY 2 cut(s) 280, 450
BsuRI GGCC 6 cut(s) 135, 205, 522, 796, 957, 999
BtsCI GGATG 1 cut(s) 774
BtsI GCAGTG 3 cut(s) 27, 93, 729
BtsIMutI CAGTG 6 cut(s) 27, 93, 318, 375, 729, 906
BveI ACCTGC 3 cut(s) 25, 826, 1006
Cac8I GCNNGC 1 cut(s) 236
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 2 cut(s) 204, 838
Csp6I GTAC 3 cut(s) 664, 781, 880
CviAII CATG 2 cut(s) 175, 736
CviQI GTAC 3 cut(s) 664, 781, 880
DdeI CTNAG 1 cut(s) 462
DpnI GATC 5 cut(s) 168, 282, 452, 585, 773
DpnII GATC 5 cut(s) 166, 280, 450, 583, 771
EaeI YGGCCR 2 cut(s) 520, 997
Eco147I AGGCCT 1 cut(s) 957
Eco24I GRGCYC 1 cut(s) 990
Eco47I GGWCC 1 cut(s) 838
Eco57I CTGAAG 3 cut(s) 611, 819, 847
Eco88I CYCGRG 1 cut(s) 788
EcoNI CCTNNNNNAGG 1 cut(s) 465
EcoRII CCWGG 4 cut(s) 267, 295, 418, 855
EcoT38I GRGCYC 1 cut(s) 990
FaeI CATG 2 cut(s) 178, 739
FaqI GGGAC 1 cut(s) 314
FatI CATG 2 cut(s) 174, 735
FauNDI CATATG 1 cut(s) 934
FblI GTMKAC 1 cut(s) 480
Fnu4HI GCNGC 4 cut(s) 492, 794, 975, 1000
FokI GGATG 1 cut(s) 781
FriOI GRGCYC 1 cut(s) 990
Fsp4HI GCNGC 4 cut(s) 492, 794, 975, 1000
FspBI CTAG 2 cut(s) 6, 644
GluI GCNGC 4 cut(s) 492, 794, 975, 1000
GsuI CTGGAG 2 cut(s) 519, 954
HaeIII GGCC 6 cut(s) 135, 205, 522, 796, 957, 999
HapII CCGG 2 cut(s) 60, 231
Hin1II CATG 2 cut(s) 178, 739
HincII GTYRAC 1 cut(s) 537
HindII GTYRAC 1 cut(s) 537
HindIII AAGCTT 2 cut(s) 113, 615
HinfI GANTC 4 cut(s) 74, 272, 353, 367
HpaI GTTAAC 1 cut(s) 537
HpaII CCGG 2 cut(s) 60, 231
HphI GGTGA 4 cut(s) 49, 49, 337, 362
Hpy166II GTNNAC 2 cut(s) 481, 537
Hpy188I TCNGA 5 cut(s) 47, 79, 360, 825, 842
Hpy188III TCNNGA 6 cut(s) 119, 145, 498, 671, 893, 1032
Hpy8I GTNNAC 2 cut(s) 481, 537
HpyAV CCTTC 7 cut(s) 116, 232, 654, 794, 842, 914, 947
HpyCH4III ACNGT 3 cut(s) 478, 780, 901
HpyCH4V TGCA 3 cut(s) 530, 650, 722
HpyF10VI GCNNNNNNNGC 3 cut(s) 500, 748, 974
HpyF3I CTNAG 1 cut(s) 462
Hsp92II CATG 2 cut(s) 178, 739
KspAI GTTAAC 1 cut(s) 537
Kzo9I GATC 5 cut(s) 166, 280, 450, 583, 771
LmnI GCTCC 2 cut(s) 500, 973
LweI GCATC 4 cut(s) 503, 637, 702, 709
MaeI CTAG 2 cut(s) 6, 644
MaeIII GTNAC 3 cut(s) 241, 314, 866
MalI GATC 5 cut(s) 168, 282, 452, 585, 773
MbiI CCGCTC 2 cut(s) 503, 793
MboI GATC 5 cut(s) 166, 280, 450, 583, 771
MboII GAAGA 6 cut(s) 26, 341, 604, 853, 937, 953
MflI RGATCY 2 cut(s) 280, 450
MhlI GDGCHC 1 cut(s) 990
MlsI TGGCCA 1 cut(s) 522
MluCI AATT 5 cut(s) 86, 524, 599, 811, 981
MluNI TGGCCA 1 cut(s) 522
MlyI GAGTC 1 cut(s) 362
MmeI TCCRAC 1 cut(s) 102
MnlI CCTC 9 cut(s) 18, 92, 109, 146, 149, 161, 396, 732, 797
Mox20I TGGCCA 1 cut(s) 522
MscI TGGCCA 1 cut(s) 522
MseI TTAA 5 cut(s) 291, 363, 536, 656, 831
MslI CAYNNNNRTG 2 cut(s) 378, 380
Msp20I TGGCCA 1 cut(s) 522
MspA1I CMGCKG 1 cut(s) 974
MspI CCGG 2 cut(s) 60, 231
MspR9I CCNGG 5 cut(s) 231, 269, 297, 420, 857
Mva1269I GAATGC 1 cut(s) 970
MvaI CCWGG 4 cut(s) 269, 297, 420, 857
MwoI GCNNNNNNNGC 3 cut(s) 500, 748, 974
NciI CCSGG 1 cut(s) 231
NdeI CATATG 1 cut(s) 934
NdeII GATC 5 cut(s) 166, 280, 450, 583, 771
NlaIII CATG 2 cut(s) 178, 739
NlaIV GGNNCC 1 cut(s) 282
NmuCI GTSAC 1 cut(s) 314
NspI RCATGY 1 cut(s) 178
OliI CACNNNNGTG 1 cut(s) 380
PaeR7I CTCGAG 1 cut(s) 788
PaqCI CACCTGC 2 cut(s) 25, 1006
PceI AGGCCT 1 cut(s) 957
PctI GAATGC 1 cut(s) 970
PfeI GAWTC 3 cut(s) 74, 272, 367
PfoI TCCNGGA 1 cut(s) 267
PkrI GCNGC 4 cut(s) 493, 795, 976, 1001
PleI GAGTC 1 cut(s) 361
PpsI GAGTC 1 cut(s) 361
Psp6I CCWGG 4 cut(s) 267, 295, 418, 855
PspGI CCWGG 4 cut(s) 267, 295, 418, 855
PspN4I GGNNCC 1 cut(s) 282
PspPI GGNCC 2 cut(s) 204, 838
PspXI VCTCGAGB 1 cut(s) 788
PsuI RGATCY 2 cut(s) 280, 450
RsaI GTAC 3 cut(s) 665, 782, 881
RsaNI GTAC 3 cut(s) 664, 781, 880
RseI CAYNNNNRTG 2 cut(s) 378, 380
SaqAI TTAA 5 cut(s) 291, 363, 536, 656, 831
SatI GCNGC 4 cut(s) 492, 794, 975, 1000
Sau3AI GATC 5 cut(s) 166, 280, 450, 583, 771
Sau96I GGNCC 2 cut(s) 204, 838
SchI GAGTC 1 cut(s) 362
ScrFI CCNGG 5 cut(s) 231, 269, 297, 420, 857
SduI GDGCHC 1 cut(s) 990
SfaNI GCATC 4 cut(s) 503, 637, 702, 709
Sfr274I CTCGAG 1 cut(s) 788
SinI GGWCC 1 cut(s) 838
SlaI CTCGAG 1 cut(s) 788
SmiMI CAYNNNNRTG 2 cut(s) 378, 380
SmlI CTYRAG 3 cut(s) 110, 788, 959
SmoI CTYRAG 3 cut(s) 110, 788, 959
Sse9I AATT 5 cut(s) 86, 524, 599, 811, 981
SseBI AGGCCT 1 cut(s) 957
SsiI CCGC 5 cut(s) 492, 503, 793, 974, 1000
SspMI CTAG 2 cut(s) 6, 644
StuI AGGCCT 1 cut(s) 957
StyD4I CCNGG 5 cut(s) 229, 267, 295, 418, 855
TaaI ACNGT 3 cut(s) 478, 780, 901
TaqI TCGA 2 cut(s) 128, 789
TasI AATT 5 cut(s) 86, 524, 599, 811, 981
TatI WGTACW 1 cut(s) 780
TauI GCSGC 4 cut(s) 494, 796, 977, 1002
TfiI GAWTC 3 cut(s) 74, 272, 367
Tru1I TTAA 5 cut(s) 291, 363, 536, 656, 831
Tru9I TTAA 5 cut(s) 291, 363, 536, 656, 831
TscAI CASTG 6 cut(s) 27, 100, 325, 382, 729, 906
TseFI GTSAC 1 cut(s) 314
Tsp45I GTSAC 1 cut(s) 314
TspGWI ACGGA 1 cut(s) 897
TspRI CASTG 6 cut(s) 27, 100, 325, 382, 729, 906
VpaK11BI GGWCC 1 cut(s) 838
XagI CCTNNNNNAGG 1 cut(s) 465
XapI RAATTY 1 cut(s) 599
XceI RCATGY 1 cut(s) 178
XhoI CTCGAG 1 cut(s) 788
XmiI GTMKAC 1 cut(s) 480
XspI CTAG 2 cut(s) 6, 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.