Rh2BG004400

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
366734 .. 370029
3296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG004400.1

Sequence Viewer

Length: 243 bp
ATGGAGGAAGTGAAGAACAAGCAGGTGATATTGAAGGAGTATGTGTCGGCCGGACTCCCCAAAGAATCTGACATGGCCGTCGTCACCACCACCACCAAACTGAAGATTCCAGAAGGCTCCGGCGGGGTTCTGGTGAAGAACCTCTACTTATCCTGCGATCCTTACATGAGAAGCCGCATGACCAAGCGCGACTCTGCTTCTTATTTTACTCTACATCTGCTGAAGAAGTTGTGCATATTCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

9.04

Weight (kDa)

9.36

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 7 - 66 8.4e-11 N-terminal domain of oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
AasI GACNNNNNNGTC 1 cut(s) 77
Acc36I ACCTGC 1 cut(s) 13
AccII CGCG 1 cut(s) 189
AciI CCGC 2 cut(s) 123, 175
AclWI GGATC 1 cut(s) 152
AcoI YGGCCR 2 cut(s) 48, 75
AcuI CTGAAG 2 cut(s) 122, 242
AgsI TTSAA 1 cut(s) 34
AlwI GGATC 1 cut(s) 152
AoxI GGCC 2 cut(s) 48, 75
AspLEI GCGC 1 cut(s) 189
AsuHPI GGTGA 3 cut(s) 37, 76, 145
BarI GAAGNNNNNNTAC 2 cut(s) 128, 160
BceAI ACGGC 1 cut(s) 62
BfuAI ACCTGC 1 cut(s) 13
BisI GCNGC 1 cut(s) 175
BlsI GCNGC 1 cut(s) 176
BmiI GGNNCC 1 cut(s) 118
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
BseX3I CGGCCG 1 cut(s) 48
Bsh1236I CGCG 1 cut(s) 189
Bsh1285I CGRYCG 1 cut(s) 51
BshFI GGCC 2 cut(s) 50, 77
BsiEI CGRYCG 1 cut(s) 51
BsiSI CCGG 2 cut(s) 51, 120
BsnI GGCC 2 cut(s) 50, 77
Bsp143I GATC 1 cut(s) 157
BspACI CCGC 2 cut(s) 123, 175
BspANI GGCC 2 cut(s) 50, 77
BspFNI CGCG 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 118
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 152
BssMI GATC 1 cut(s) 157
BstFNI CGCG 1 cut(s) 189
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 1 cut(s) 160
BstMBI GATC 1 cut(s) 157
BstMCI CGRYCG 1 cut(s) 51
BstUI CGCG 1 cut(s) 189
BstZI CGGCCG 1 cut(s) 48
BsuRI GGCC 2 cut(s) 50, 77
BveI ACCTGC 1 cut(s) 13
CfoI GCGC 1 cut(s) 189
CviAII CATG 3 cut(s) 73, 166, 178
CviJI RGCY 4 cut(s) 50, 77, 117, 174
CviKI_1 RGCY 4 cut(s) 50, 77, 117, 174
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
DrdI GACNNNNNNGTC 1 cut(s) 77
DseDI GACNNNNNNGTC 1 cut(s) 77
EaeI YGGCCR 2 cut(s) 48, 75
EagI CGGCCG 1 cut(s) 48
EclXI CGGCCG 1 cut(s) 48
Eco52I CGGCCG 1 cut(s) 48
Eco57I CTGAAG 2 cut(s) 122, 242
FaeI CATG 3 cut(s) 76, 169, 181
FaiI YATR 5 cut(s) 42, 74, 167, 179, 236
FatI CATG 3 cut(s) 72, 165, 177
FauI CCCGC 1 cut(s) 116
Fnu4HI GCNGC 1 cut(s) 175
Fsp4HI GCNGC 1 cut(s) 175
GlaI GCGC 1 cut(s) 188
GluI GCNGC 1 cut(s) 175
HaeIII GGCC 2 cut(s) 50, 77
HapII CCGG 2 cut(s) 51, 120
HhaI GCGC 1 cut(s) 189
Hin1II CATG 3 cut(s) 76, 169, 181
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HinfI GANTC 4 cut(s) 54, 65, 106, 191
HpaII CCGG 2 cut(s) 51, 120
HphI GGTGA 3 cut(s) 37, 76, 145
Hpy188I TCNGA 1 cut(s) 70
Hpy188III TCNNGA 1 cut(s) 110
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 2 cut(s) 28, 107
HpyCH4V TGCA 1 cut(s) 234
Hsp92II CATG 3 cut(s) 76, 169, 181
HspAI GCGC 1 cut(s) 187
Kzo9I GATC 1 cut(s) 157
LmnI GCTCC 1 cut(s) 122
LpnPI CCDG 6 cut(s) 8, 64, 116, 123, 133, 166
MaeIII GTNAC 1 cut(s) 82
MalI GATC 1 cut(s) 159
MboI GATC 1 cut(s) 157
MboII GAAGA 4 cut(s) 25, 115, 148, 235
MlyI GAGTC 2 cut(s) 48, 185
MnlI CCTC 1 cut(s) 152
MspI CCGG 2 cut(s) 51, 120
MvnI CGCG 1 cut(s) 189
NdeII GATC 1 cut(s) 157
NlaIII CATG 3 cut(s) 76, 169, 181
NlaIV GGNNCC 1 cut(s) 118
NmuCI GTSAC 1 cut(s) 82
PaqCI CACCTGC 1 cut(s) 13
PfeI GAWTC 2 cut(s) 65, 106
PkrI GCNGC 1 cut(s) 176
PleI GAGTC 2 cut(s) 48, 185
PpsI GAGTC 2 cut(s) 48, 185
PspN4I GGNNCC 1 cut(s) 118
SatI GCNGC 1 cut(s) 175
Sau3AI GATC 1 cut(s) 157
SchI GAGTC 2 cut(s) 48, 185
SetI ASST 2 cut(s) 27, 144
SsiI CCGC 2 cut(s) 123, 175
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 2 cut(s) 65, 106
TseFI GTSAC 1 cut(s) 82
Tsp45I GTSAC 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.