pycom02g00100

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
62578 .. 63025
448 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g00100.2

Sequence Viewer

Length: 342 bp
ATGGAAGTGACGAGCAACAAGCAGGTGATATTGAGAGACTATGTCACCGGCTTCCCCAAAGAATCCGACATGCAATTAGTCACCGCGGCCACCACCGAGCTGAAGCTTCCAGAAGGTTCCAATCGGGTTCTGGTGAAGAACCTCTACTTGTCCTGCGACCCTTATATGAGAGGCCGCATGACCAAAAGAGTATCCAAGATAACTCTAATGATCCCAATCTTGGAAAAAGAAAATAGACTTTTCTTATTTAGCTCTAGGCTTTGTTTTTCCTTGGATGATATACAATGCTTGGGGACTTGGATATTTATAGCAAACCAAATGAAAGCTACACCACACACTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.99

Weight (kDa)

9.12

Isoelectric Point (pI)

31.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65560
fragaria_vesca FvH4_1g00330 FvH4_1g00342 FvH4_1g00343 FvH4_1g00344 FvH4_1g00345 FvH4_1g00345 FvH4_1g00346 FvH4_1g26520
malus_domestica MD02G1001800.v1.1 MD02G1001900.v1.1 MD02G1002100.v1.1 MD02G1002300.v1.1 MD02G1002400.v1.1 MD02G1002500.v1.1 MD02G1002600.v1.1 MD15G1145700.v1.1
prunus_persica Prupe.7G268600_v2.0.a1 Prupe.7G268700_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268800_v2.0.a1 Prupe.7G268900_v2.0.a1
pyrus_communis pycom02g00050 pycom02g00060 pycom02g00100 pycom02g00120 pycom02g00130 pycom15g13090 pycom15g13100
rosa_chinensis RchiOBHm_Chr1g0325321 RchiOBHm_Chr1g0325341 RchiOBHm_Chr1g0325351 RchiOBHm_Chr1g0325361 RchiOBHm_Chr1g0364881 RchiOBHm_Chr1g0364891 RchiOBHm_Chr2g0084701 RchiOBHm_Chr2g0084721 RchiOBHm_Chr2g0084731 RchiOBHm_Chr2g0084741 RchiOBHm_Chr2g0084751 RchiOBHm_Chr2g0084761 RchiOBHm_Chr2g0084771 RchiOBHm_Chr2g0085311 RchiOBHm_Chr2g0085321 RchiOBHm_Chr2g0085341 RchiOBHm_Chr2g0085351 RchiOBHm_Chr2g0117721 RchiOBHm_Chr2g0159631 RchiOBHm_Chr3g0484011 RchiOBHm_Chr5g0021141 RchiOBHm_Chr5g0061081 RchiOBHm_Chr6g0275731 RchiOBHm_Chr7g0238011
rosa_laevigata RLG00000013438 RLG00000015632 RLG00000015634 RLG00000015635 RLG00000015636 RLG00000015637 RLG00000015677 RLG00000015679 RLG00000030145 RLG00000030146 RLG00000035427
rosa_multiflora Rmu_co8334849.1_g000001 Rmu_sc0001366.1_g000035 Rmu_sc0002352.1_g000003 Rmu_sc0002352.1_g000004 Rmu_sc0002352.1_g000006 Rmu_sc0002352.1_g000007 Rmu_sc0002352.1_g000009 Rmu_sc0002586.1_g000008 Rmu_sc0004966.1_g000016 Rmu_sc0007122.1_g000001 Rmu_sc0008804.1_g000002 Rmu_sc0008883.1_g000001 Rmu_sc0010860.1_g000002 Rmu_sc0012119.1_g000001 Rmu_sc0012119.1_g000003 Rmu_sc0012119.1_g000006 Rmu_sc0012119.1_g000007 Rmu_sc0012119.1_g000009 Rmu_sc0020031.1_g000004 Rmu_sc0020800.1_g000005 Rmu_sc0020800.1_g000007 Rmu_sc0020800.1_g000008 Rmu_sc0020800.1_g000009 Rmu_sc0025597.1_g000001 Rmu_sc0029132.1_g000002
rosa_roxburghii Rroxscaffold_2G00155450 Rroxscaffold_2G00155460 Rroxscaffold_2G00155470 Rroxscaffold_2G00155830 Rroxscaffold_2G00155840 Rroxscaffold_2G00155850 Rroxscaffold_2G00155860 Rroxscaffold_2G00155870 Rroxscaffold_2G00155910 Rroxscaffold_3G00273850 Rroxscaffold_4G00324820 Rroxscaffold_7G00192930 Rroxscaffold_7G00192960
rosa_rugosa Rorug01G0051300 Rorug01G0051400 Rorug01G0455700 Rorug01G0455800 Rorug01G0455900 Rorug01G0459500 Rorug01G0459500 Rorug01G0459600 Rorug01G0459700 Rorug01G0459700 Rorug02G0335000
rosa_samantha Rh1AG066500 Rh1BG054700 Rh1BG054800 Rh1BG176600 Rh2BG004400 Rh2BG004500 Rh2BG004600 Rh2BG004700 Rh2BG008600 Rh2BG008700 Rh2CG004500 Rh2CG004700 Rh2CG004800 Rh2CG004900 Rh2CG005000 Rh2CG005100 Rh2CG005200 Rh2CG009300 Rh2CG009400 Rh2DG004200 Rh2DG004300 Rh2DG004400 Rh2DG004500 Rh2DG004600 Rh2DG009800 Rh5BG411800 Rh5CG167200 Rh5CG436800 Rh5CG578800 Rh6DG203800
rosa_wichuraiana Rw1G005560 Rw2G000320 Rw2G000350 Rw2G000360 Rw2G000370 Rw2G000750 Rw2G000760 Rw4G022130 Rw5G015810 Rw5G037620 Rw6G018120 Rw7G038530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
Acc36I ACCTGC 1 cut(s) 13
AccII CGCG 1 cut(s) 86
AciI CCGC 3 cut(s) 84, 86, 175
AclWI GGATC 1 cut(s) 205
AcoI YGGCCR 1 cut(s) 87
AcuI CTGAAG 1 cut(s) 122
AfiI CCNNNNNNNGG 1 cut(s) 220
AluBI AGCT 4 cut(s) 100, 106, 252, 326
AluI AGCT 4 cut(s) 100, 106, 252, 326
Alw26I GTCTC 1 cut(s) 30
AlwI GGATC 1 cut(s) 205
AoxI GGCC 2 cut(s) 87, 172
AsuHPI GGTGA 4 cut(s) 37, 37, 73, 145
BarI GAAGNNNNNNTAC 2 cut(s) 128, 160
BciVI GTATCC 1 cut(s) 202
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 1 cut(s) 255
BfuAI ACCTGC 1 cut(s) 13
BfuI GTATCC 1 cut(s) 202
BisI GCNGC 2 cut(s) 87, 175
BlsI GCNGC 2 cut(s) 88, 176
BmiI GGNNCC 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 215
BsaJI CCNNGG 2 cut(s) 84, 270
Bsc4I CCNNNNNNNGG 1 cut(s) 220
Bse118I RCCGGY 1 cut(s) 47
Bse8I GATNNNNATC 1 cut(s) 215
BseDI CCNNGG 2 cut(s) 84, 270
BseGI GGATG 1 cut(s) 280
BseJI GATNNNNATC 1 cut(s) 215
BseLI CCNNNNNNNGG 1 cut(s) 220
Bsh1236I CGCG 1 cut(s) 86
BshFI GGCC 2 cut(s) 89, 174
BsiSI CCGG 1 cut(s) 48
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 1 cut(s) 220
BsmAI GTCTC 1 cut(s) 30
BsmFI GGGAC 1 cut(s) 307
BsnI GGCC 2 cut(s) 89, 174
Bsp143I GATC 1 cut(s) 210
BspACI CCGC 3 cut(s) 84, 86, 175
BspANI GGCC 2 cut(s) 89, 174
BspFNI CGCG 1 cut(s) 86
BspLI GGNNCC 1 cut(s) 118
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 205
BsrFI RCCGGY 1 cut(s) 47
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 2 cut(s) 84, 270
BssMI GATC 1 cut(s) 210
BssT1I CCWWGG 1 cut(s) 270
BstDSI CCRYGG 1 cut(s) 84
BstF5I GGATG 1 cut(s) 280
BstFNI CGCG 1 cut(s) 86
BstKTI GATC 1 cut(s) 213
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 1 cut(s) 210
BstNSI RCATGY 1 cut(s) 73
BstUI CGCG 1 cut(s) 86
BsuI GTATCC 1 cut(s) 202
BsuRI GGCC 2 cut(s) 89, 174
BtgI CCRYGG 1 cut(s) 84
BtsCI GGATG 1 cut(s) 280
BveI ACCTGC 1 cut(s) 13
Cfr10I RCCGGY 1 cut(s) 47
Cfr42I CCGCGG 1 cut(s) 87
CviAII CATG 2 cut(s) 70, 178
CviJI RGCY 8 cut(s) 51, 89, 100, 106, 174, 252, 259, 326
CviKI_1 RGCY 8 cut(s) 51, 89, 100, 106, 174, 252, 259, 326
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
EaeI YGGCCR 1 cut(s) 87
Eco130I CCWWGG 1 cut(s) 270
Eco57I CTGAAG 1 cut(s) 122
EcoT14I CCWWGG 1 cut(s) 270
ErhI CCWWGG 1 cut(s) 270
FaeI CATG 2 cut(s) 73, 181
FaiI YATR 7 cut(s) 42, 71, 165, 167, 179, 281, 308
FaqI GGGAC 1 cut(s) 307
FatI CATG 2 cut(s) 69, 177
Fnu4HI GCNGC 2 cut(s) 87, 175
FokI GGATG 1 cut(s) 287
Fsp4HI GCNGC 2 cut(s) 87, 175
FspBI CTAG 1 cut(s) 255
GluI GCNGC 2 cut(s) 87, 175
HaeIII GGCC 2 cut(s) 89, 174
HapII CCGG 1 cut(s) 48
Hin1II CATG 2 cut(s) 73, 181
HindIII AAGCTT 1 cut(s) 104
HinfI GANTC 1 cut(s) 62
HpaII CCGG 1 cut(s) 48
HphI GGTGA 4 cut(s) 37, 37, 73, 145
Hpy188I TCNGA 1 cut(s) 67
Hpy188III TCNNGA 1 cut(s) 110
HpyAV CCTTC 1 cut(s) 107
HpyCH4V TGCA 1 cut(s) 73
Hsp92II CATG 2 cut(s) 73, 181
KspI CCGCGG 1 cut(s) 87
Kzo9I GATC 1 cut(s) 210
LpnPI CCDG 5 cut(s) 8, 61, 116, 123, 166
MaeI CTAG 1 cut(s) 255
MaeIII GTNAC 3 cut(s) 7, 43, 79
MalI GATC 1 cut(s) 212
MboI GATC 1 cut(s) 210
MboII GAAGA 1 cut(s) 148
MluCI AATT 1 cut(s) 74
MmeI TCCRAC 1 cut(s) 90
MnlI CCTC 2 cut(s) 152, 164
MseI TTAA 1 cut(s) 340
MspA1I CMGCKG 1 cut(s) 86
MspI CCGG 1 cut(s) 48
MvnI CGCG 1 cut(s) 86
NdeII GATC 1 cut(s) 210
NlaIII CATG 2 cut(s) 73, 181
NlaIV GGNNCC 1 cut(s) 118
NmuCI GTSAC 3 cut(s) 7, 43, 79
NspI RCATGY 1 cut(s) 73
PaqCI CACCTGC 1 cut(s) 13
PfeI GAWTC 1 cut(s) 62
PflFI GACNNNGTC 1 cut(s) 41
PkrI GCNGC 2 cut(s) 88, 176
PspN4I GGNNCC 1 cut(s) 118
PsyI GACNNNGTC 1 cut(s) 41
SacII CCGCGG 1 cut(s) 87
SaqAI TTAA 1 cut(s) 340
SatI GCNGC 2 cut(s) 87, 175
Sau3AI GATC 1 cut(s) 210
SetI ASST 7 cut(s) 27, 102, 108, 118, 144, 254, 328
Sfr303I CCGCGG 1 cut(s) 87
SgrBI CCGCGG 1 cut(s) 87
Sse9I AATT 1 cut(s) 74
SsiI CCGC 3 cut(s) 84, 86, 175
SspMI CTAG 1 cut(s) 255
StyI CCWWGG 1 cut(s) 270
TasI AATT 1 cut(s) 74
TauI GCSGC 2 cut(s) 89, 177
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 1 cut(s) 340
Tru9I TTAA 1 cut(s) 340
TseFI GTSAC 3 cut(s) 7, 43, 79
Tsp45I GTSAC 3 cut(s) 7, 43, 79
TspDTI ATGAA 1 cut(s) 335
Tth111I GACNNNGTC 1 cut(s) 41
XceI RCATGY 1 cut(s) 73
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XspI CTAG 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.