MD02G1163900.v1.1

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000431
Physical Location & Seq
Reverse (-)
14009927 .. 14010573
647 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1163900.v1.1.491

Sequence Viewer

Length: 522 bp
ATGCCGGCATTTTTGGGAATGCCGGGAATTGCAGCTTACTTTGGATTTCACAAAATATGTTATCCGAAGGAACGCGATTGTTTCTATGTTTCTTCTGCAGCAGCAGGAGTTGGTCAACTTGTTGGACAATTTGCGAAAATGATCGGCTGCTATGTGGTTGGAAGTGCAAGCACTAAGGAGAAAGTTGATCTCTTAAAGCAAAAGATGGGATTTGATGAAGCGTTCAACTATAAGGAGAAAAATTTAGGTTCAGCATTAAGGAAGTACTTCCCCGAAGGCATTGACATTTACCTCGACAATGTTGGTGGTCGCATGCTTGATGAAGTTAATTTACAGATGAAAGCTCATGGCCGCATCGCACTCTGTGGTATGATTCACAATACAATCTTGAGGAACCAGAGGTTGGTCTATGTTGAAGATGTTGCTCAAGGGATGGAGAATGCCCCCGCTGCACTGGTCGGAATTTTGGTAAGCAGGTCGTTTGTATTGCTAATGAATAAGCTTCCTCTCTCACTGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

174

Amino Acids

19.11

Weight (kDa)

8.84

Isoelectric Point (pI)

38.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_zinc_N PF00107 36 - 136 1.8e-20 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 465
AccB7I CCANNNNNTGG 1 cut(s) 403
AccII CGCG 1 cut(s) 75
AciI CCGC 2 cut(s) 352, 447
AcoI YGGCCR 1 cut(s) 349
AcsI RAATTY 2 cut(s) 241, 462
AdeI CACNNNGTG 1 cut(s) 365
AfaI GTAC 1 cut(s) 266
AfiI CCNNNNNNNGG 1 cut(s) 403
AgsI TTSAA 2 cut(s) 226, 416
AjuI GAANNNNNNNTTGG 2 cut(s) 386, 418
AluBI AGCT 3 cut(s) 35, 344, 502
AluI AGCT 3 cut(s) 35, 344, 502
AoxI GGCC 1 cut(s) 349
ApeKI GCWGC 5 cut(s) 32, 98, 101, 147, 449
ApoI RAATTY 2 cut(s) 241, 462
Asp700I GAANNNNTTC 1 cut(s) 266
AsuC2I CCSGG 1 cut(s) 24
BarI GAAGNNNNNNTAC 2 cut(s) 315, 347
BbvI GCAGC 5 cut(s) 44, 110, 113, 134, 436
BccI CCATC 2 cut(s) 199, 427
BcnI CCSGG 1 cut(s) 24
BfmI CTRYAG 1 cut(s) 96
BfuAI ACCTGC 1 cut(s) 465
BisI GCNGC 6 cut(s) 33, 99, 102, 148, 352, 450
BlsI GCNGC 6 cut(s) 34, 100, 103, 149, 353, 451
BmcAI AGTACT 1 cut(s) 266
Bme1390I CCNGG 1 cut(s) 24
BmiI GGNNCC 1 cut(s) 395
BmrFI CCNGG 1 cut(s) 24
BmsI GCATC 1 cut(s) 363
BpuEI CTTGAG 2 cut(s) 409, 411
BpuMI CCSGG 1 cut(s) 24
Bsc4I CCNNNNNNNGG 1 cut(s) 403
Bse118I RCCGGY 1 cut(s) 4
Bse1I ACTGG 1 cut(s) 459
BseGI GGATG 1 cut(s) 438
BseLI CCNNNNNNNGG 1 cut(s) 403
BseNI ACTGG 1 cut(s) 459
BseXI GCAGC 5 cut(s) 44, 110, 113, 134, 436
BsgI GTGCAG 1 cut(s) 435
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 1 cut(s) 351
BsiSI CCGG 2 cut(s) 5, 23
BslI CCNNNNNNNGG 1 cut(s) 403
BsmI GAATGC 2 cut(s) 24, 445
BsnI GGCC 1 cut(s) 351
Bsp143I GATC 2 cut(s) 141, 187
BspACI CCGC 2 cut(s) 352, 447
BspANI GGCC 1 cut(s) 351
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 1 cut(s) 395
BspMAI CTGCAG 1 cut(s) 100
BspMI ACCTGC 1 cut(s) 465
BsrFI RCCGGY 1 cut(s) 4
BsrI ACTGG 1 cut(s) 459
BssAI RCCGGY 1 cut(s) 4
BssMI GATC 2 cut(s) 141, 187
Bst4CI ACNGT 1 cut(s) 516
BstC8I GCNNGC 3 cut(s) 6, 169, 314
BstDEI CTNAG 1 cut(s) 174
BstF5I GGATG 1 cut(s) 438
BstFNI CGCG 1 cut(s) 75
BstKTI GATC 2 cut(s) 144, 190
BstMBI GATC 2 cut(s) 141, 187
BstMWI GCNNNNNNNGC 1 cut(s) 449
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 22
BstSFI CTRYAG 1 cut(s) 96
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 5 cut(s) 44, 110, 113, 134, 436
BsuRI GGCC 1 cut(s) 351
BtgZI GCGATG 1 cut(s) 340
BtsCI GGATG 1 cut(s) 438
BtsIMutI CAGTG 2 cut(s) 452, 512
BveI ACCTGC 1 cut(s) 465
Cac8I GCNNGC 3 cut(s) 6, 169, 314
Cfr10I RCCGGY 1 cut(s) 4
Csp6I GTAC 1 cut(s) 265
CspCI CAANNNNNGTGG 2 cut(s) 286, 321
CviAII CATG 2 cut(s) 313, 347
CviJI RGCY 5 cut(s) 35, 147, 344, 351, 502
CviKI_1 RGCY 5 cut(s) 35, 147, 344, 351, 502
CviQI GTAC 1 cut(s) 265
DdeI CTNAG 1 cut(s) 174
DpnI GATC 2 cut(s) 143, 189
DpnII GATC 2 cut(s) 141, 187
DraIII CACNNNGTG 1 cut(s) 365
EaeI YGGCCR 1 cut(s) 349
FaeI CATG 2 cut(s) 316, 350
FaiI YATR 8 cut(s) 58, 87, 153, 231, 314, 348, 371, 411
FatI CATG 2 cut(s) 312, 346
FauI CCCGC 1 cut(s) 454
Fnu4HI GCNGC 6 cut(s) 33, 99, 102, 148, 352, 450
FokI GGATG 1 cut(s) 445
Fsp4HI GCNGC 6 cut(s) 33, 99, 102, 148, 352, 450
GluI GCNGC 6 cut(s) 33, 99, 102, 148, 352, 450
HaeIII GGCC 1 cut(s) 351
HapII CCGG 2 cut(s) 5, 23
Hin1II CATG 2 cut(s) 316, 350
HincII GTYRAC 1 cut(s) 116
HindII GTYRAC 1 cut(s) 116
HindIII AAGCTT 1 cut(s) 500
HinfI GANTC 1 cut(s) 373
HpaII CCGG 2 cut(s) 5, 23
Hpy166II GTNNAC 1 cut(s) 116
Hpy188I TCNGA 2 cut(s) 66, 461
Hpy188III TCNNGA 1 cut(s) 388
Hpy8I GTNNAC 1 cut(s) 116
HpyAV CCTTC 2 cut(s) 61, 269
HpyCH4III ACNGT 1 cut(s) 516
HpyCH4V TGCA 4 cut(s) 32, 98, 167, 452
HpyF10VI GCNNNNNNNGC 1 cut(s) 449
HpyF3I CTNAG 1 cut(s) 174
Hsp92II CATG 2 cut(s) 316, 350
KroI GCCGGC 1 cut(s) 4
KroNI GCCGGC 1 cut(s) 6
Kzo9I GATC 2 cut(s) 141, 187
LpnPI CCDG 6 cut(s) 18, 36, 90, 410, 440, 460
Lsp1109I GCAGC 5 cut(s) 44, 110, 113, 134, 436
LweI GCATC 1 cut(s) 363
MalI GATC 2 cut(s) 143, 189
MboI GATC 2 cut(s) 141, 187
MboII GAAGA 2 cut(s) 84, 428
MluCI AATT 5 cut(s) 27, 128, 241, 328, 462
MmeI TCCRAC 3 cut(s) 103, 139, 439
MnlI CCTC 4 cut(s) 302, 384, 393, 516
MroNI GCCGGC 1 cut(s) 4
MroXI GAANNNNTTC 1 cut(s) 266
MseI TTAA 3 cut(s) 194, 257, 327
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 2 cut(s) 5, 23
MspR9I CCNGG 1 cut(s) 24
Mva1269I GAATGC 2 cut(s) 24, 445
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 1 cut(s) 449
NaeI GCCGGC 1 cut(s) 6
NciI CCSGG 1 cut(s) 24
NdeII GATC 2 cut(s) 141, 187
NgoMIV GCCGGC 1 cut(s) 4
NlaIII CATG 2 cut(s) 316, 350
NlaIV GGNNCC 1 cut(s) 395
NspI RCATGY 1 cut(s) 316
PaeI GCATGC 1 cut(s) 316
PctI GAATGC 2 cut(s) 24, 445
PdiI GCCGGC 1 cut(s) 6
PdmI GAANNNNTTC 1 cut(s) 266
PfeI GAWTC 1 cut(s) 373
PflMI CCANNNNNTGG 1 cut(s) 403
PkrI GCNGC 6 cut(s) 34, 100, 103, 149, 353, 451
PspN4I GGNNCC 1 cut(s) 395
PstI CTGCAG 1 cut(s) 100
RsaI GTAC 1 cut(s) 266
RsaNI GTAC 1 cut(s) 265
SaqAI TTAA 3 cut(s) 194, 257, 327
SatI GCNGC 6 cut(s) 33, 99, 102, 148, 352, 450
Sau3AI GATC 2 cut(s) 141, 187
ScaI AGTACT 1 cut(s) 266
ScrFI CCNGG 1 cut(s) 24
SetI ASST 7 cut(s) 37, 250, 294, 346, 404, 479, 504
SfaNI GCATC 1 cut(s) 363
SfcI CTRYAG 1 cut(s) 96
SmlI CTYRAG 2 cut(s) 388, 426
SmoI CTYRAG 2 cut(s) 388, 426
SphI GCATGC 1 cut(s) 316
Sse9I AATT 5 cut(s) 27, 128, 241, 328, 462
SsiI CCGC 2 cut(s) 352, 447
StyD4I CCNGG 1 cut(s) 22
TaaI ACNGT 1 cut(s) 516
TaqI TCGA 1 cut(s) 294
TasI AATT 5 cut(s) 27, 128, 241, 328, 462
TatI WGTACW 1 cut(s) 264
TauI GCSGC 1 cut(s) 354
TfiI GAWTC 1 cut(s) 373
Tru1I TTAA 3 cut(s) 194, 257, 327
Tru9I TTAA 3 cut(s) 194, 257, 327
TscAI CASTG 2 cut(s) 459, 519
TseI GCWGC 5 cut(s) 32, 98, 101, 147, 449
TspDTI ATGAA 4 cut(s) 231, 336, 353, 509
TspRI CASTG 2 cut(s) 459, 519
Van91I CCANNNNNTGG 1 cut(s) 403
XapI RAATTY 2 cut(s) 241, 462
XceI RCATGY 1 cut(s) 316
XmnI GAANNNNTTC 1 cut(s) 266
ZrmI AGTACT 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.