Rh2CG269200

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000431
Physical Location & Seq
Forward (+)
29196348 .. 29196677
330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG269200.1

Sequence Viewer

Length: 330 bp
ATGCTGGATGCGGTCTTTCTCAACATGAGTGTCCATGGCCGAATTGCTGGTTGTGGAATGATTTCACAGTACAATCTTGATCAGCCAGAAGGGGTGACCAATTTGATGCACCTTGTGTACAAGCGTATACGCTTCCATGGATTTACCGTTCGTGATCACTATCATCTGCATCCCAAATTCTTAGACTTCATTCTGCCTTACATTCAACAAGGGAAGATCGCTTATATAGAAGACATCGTTGAAGGCCTTGAGAATGCTCCAGCAGCACTGTTTGGACTTTTTAAGGGTCACAACATTGGAAAACAAGTAGTTGCAGTTGATCATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

109

Amino Acids

12.39

Weight (kDa)

6.42

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 127
AciI CCGC 1 cut(s) 11
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 1 cut(s) 176
AdeI CACNNNGTG 1 cut(s) 115
AfaI GTAC 2 cut(s) 71, 119
AgsI TTSAA 2 cut(s) 206, 242
AloI GAACNNNNNNTCC 2 cut(s) 132, 164
AoxI GGCC 2 cut(s) 37, 244
ApeKI GCWGC 1 cut(s) 263
ApoI RAATTY 1 cut(s) 176
Asp700I GAANNNNTTC 1 cut(s) 61
AsuHPI GGTGA 1 cut(s) 106
BbsI GAAGAC 1 cut(s) 237
BbvI GCAGC 1 cut(s) 275
BclI TGATCA 3 cut(s) 79, 154, 319
BisI GCNGC 1 cut(s) 264
BlsI GCNGC 1 cut(s) 265
BmsI GCATC 2 cut(s) 96, 178
BpiI GAAGAC 1 cut(s) 237
BpmI CTGGAG 1 cut(s) 243
BpuEI CTTGAG 1 cut(s) 269
BsaBI GATNNNNATC 1 cut(s) 159
BsaJI CCNNGG 2 cut(s) 34, 136
Bse8I GATNNNNATC 1 cut(s) 159
BseDI CCNNGG 2 cut(s) 34, 136
BseGI GGATG 2 cut(s) 13, 169
BseJI GATNNNNATC 1 cut(s) 159
BseXI GCAGC 1 cut(s) 275
BshFI GGCC 2 cut(s) 39, 246
BsmI GAATGC 1 cut(s) 259
BsnI GGCC 2 cut(s) 39, 246
Bsp1407I TGTACA 1 cut(s) 117
Bsp143I GATC 4 cut(s) 79, 154, 216, 319
Bsp19I CCATGG 2 cut(s) 34, 136
BspACI CCGC 1 cut(s) 11
BspANI GGCC 2 cut(s) 39, 246
BspHI TCATGA 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 117
BssECI CCNNGG 2 cut(s) 34, 136
BssMI GATC 4 cut(s) 79, 154, 216, 319
BssNAI GTATAC 1 cut(s) 128
BssT1I CCWWGG 2 cut(s) 34, 136
Bst1107I GTATAC 1 cut(s) 128
Bst4CI ACNGT 3 cut(s) 69, 148, 270
BstAUI TGTACA 1 cut(s) 117
BstDEI CTNAG 1 cut(s) 181
BstDSI CCRYGG 2 cut(s) 34, 136
BstEII GGTNACC 1 cut(s) 94
BstF5I GGATG 2 cut(s) 13, 169
BstKTI GATC 4 cut(s) 82, 157, 219, 322
BstMBI GATC 4 cut(s) 79, 154, 216, 319
BstMWI GCNNNNNNNGC 1 cut(s) 263
BstPI GGTNACC 1 cut(s) 94
BstV1I GCAGC 1 cut(s) 275
BstV2I GAAGAC 1 cut(s) 237
BstZ17I GTATAC 1 cut(s) 128
BsuRI GGCC 2 cut(s) 39, 246
BtgI CCRYGG 2 cut(s) 34, 136
BtsCI GGATG 2 cut(s) 13, 169
BtsIMutI CAGTG 1 cut(s) 266
CciI TCATGA 1 cut(s) 322
Csp6I GTAC 2 cut(s) 70, 118
CviAII CATG 4 cut(s) 25, 35, 137, 323
CviJI RGCY 3 cut(s) 39, 85, 246
CviKI_1 RGCY 3 cut(s) 39, 85, 246
CviQI GTAC 2 cut(s) 70, 118
DdeI CTNAG 1 cut(s) 181
DpnI GATC 4 cut(s) 81, 156, 218, 321
DpnII GATC 4 cut(s) 79, 154, 216, 319
DraIII CACNNNGTG 1 cut(s) 115
EaeI YGGCCR 1 cut(s) 37
Eco130I CCWWGG 2 cut(s) 34, 136
Eco147I AGGCCT 1 cut(s) 246
Eco91I GGTNACC 1 cut(s) 94
EcoO65I GGTNACC 1 cut(s) 94
EcoT14I CCWWGG 2 cut(s) 34, 136
ErhI CCWWGG 2 cut(s) 34, 136
FaeI CATG 4 cut(s) 28, 38, 140, 326
FaiI YATR 7 cut(s) 26, 36, 128, 138, 225, 227, 324
FatI CATG 4 cut(s) 24, 34, 136, 322
FbaI TGATCA 3 cut(s) 79, 154, 319
FblI GTMKAC 1 cut(s) 127
Fnu4HI GCNGC 1 cut(s) 264
FokI GGATG 2 cut(s) 20, 156
Fsp4HI GCNGC 1 cut(s) 264
GluI GCNGC 1 cut(s) 264
GsuI CTGGAG 1 cut(s) 243
HaeIII GGCC 2 cut(s) 39, 246
Hin1II CATG 4 cut(s) 28, 38, 140, 326
HphI GGTGA 1 cut(s) 106
Hpy166II GTNNAC 2 cut(s) 118, 128
Hpy188III TCNNGA 3 cut(s) 77, 152, 323
Hpy8I GTNNAC 2 cut(s) 118, 128
HpyAV CCTTC 2 cut(s) 83, 236
HpyCH4III ACNGT 3 cut(s) 69, 148, 270
HpyCH4V TGCA 3 cut(s) 109, 169, 314
HpyF10VI GCNNNNNNNGC 1 cut(s) 263
HpyF3I CTNAG 1 cut(s) 181
Hsp92II CATG 4 cut(s) 28, 38, 140, 326
Ksp22I TGATCA 3 cut(s) 79, 154, 319
Kzo9I GATC 4 cut(s) 79, 154, 216, 319
LmnI GCTCC 1 cut(s) 262
LpnPI CCDG 3 cut(s) 33, 99, 273
Lsp1109I GCAGC 1 cut(s) 275
LweI GCATC 2 cut(s) 96, 178
MaeIII GTNAC 2 cut(s) 94, 287
MalI GATC 4 cut(s) 81, 156, 218, 321
MboI GATC 4 cut(s) 79, 154, 216, 319
MboII GAAGA 2 cut(s) 226, 242
MluCI AATT 3 cut(s) 42, 100, 176
MroXI GAANNNNTTC 1 cut(s) 61
MseI TTAA 1 cut(s) 282
Mva1269I GAATGC 1 cut(s) 259
MwoI GCNNNNNNNGC 1 cut(s) 263
NcoI CCATGG 2 cut(s) 34, 136
NdeII GATC 4 cut(s) 79, 154, 216, 319
NlaIII CATG 4 cut(s) 28, 38, 140, 326
NmuCI GTSAC 2 cut(s) 94, 287
PagI TCATGA 1 cut(s) 322
PceI AGGCCT 1 cut(s) 246
PctI GAATGC 1 cut(s) 259
PdmI GAANNNNTTC 1 cut(s) 61
PkrI GCNGC 1 cut(s) 265
PspEI GGTNACC 1 cut(s) 94
RsaI GTAC 2 cut(s) 71, 119
RsaNI GTAC 2 cut(s) 70, 118
SaqAI TTAA 1 cut(s) 282
SatI GCNGC 1 cut(s) 264
Sau3AI GATC 4 cut(s) 79, 154, 216, 319
SetI ASST 1 cut(s) 114
SfaNI GCATC 2 cut(s) 96, 178
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
Sse9I AATT 3 cut(s) 42, 100, 176
SseBI AGGCCT 1 cut(s) 246
SsiI CCGC 1 cut(s) 11
StuI AGGCCT 1 cut(s) 246
StyI CCWWGG 2 cut(s) 34, 136
TaaI ACNGT 3 cut(s) 69, 148, 270
TasI AATT 3 cut(s) 42, 100, 176
TatI WGTACW 2 cut(s) 69, 117
Tru1I TTAA 1 cut(s) 282
Tru9I TTAA 1 cut(s) 282
TscAI CASTG 1 cut(s) 273
TseFI GTSAC 2 cut(s) 94, 287
TseI GCWGC 1 cut(s) 263
Tsp45I GTSAC 2 cut(s) 94, 287
TspDTI ATGAA 1 cut(s) 178
TspRI CASTG 1 cut(s) 273
XapI RAATTY 1 cut(s) 176
XmiI GTMKAC 1 cut(s) 127
XmnI GAANNNNTTC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.