AT5G37980

NADP-dependent alkenal double bond reductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
15131289 .. 15133085
1797 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37980.1

Sequence Viewer

Length: 1062 bp
ATGGCAAACATCAGCGTAGTGACGACAGCGACTAACAACCAGGTGATTCTCCGTAACTACGTGAGTGGATTCCCTAAAGAATCCGACCTCTACATCGCCGCAACCACCGTTGACTTACGTGTACCTCCCGGATCCATGGCGGTTCTAGTCAAGAATCTCTACTTATCTTGCGATCCTTTCAGCCGCATTCGCATGGAAAAACCCGACCCTTCGTCACCTGCTTCCGTCGCTCGCGCTTACTCTATCGGCAAGCCAATCTCTGGATTTGGAGTGGCTAAAGCAATAGATTCATGTCATCCAAATTACAAAACAGGAGATTTACTTTGGGGAAGAGTTGGATGGGAAGAGTATAGTGTTATTACTCCAACTCCTTCTTCACATTTCAAGATTCATCACACTGATGTTCCATTATCTTTCTACACTGGACTTCTTGGTATTCCGGGTCTCACTGCGTATGTTGGGTTTTACGAGATATGTTCTCCGAAGAAAGGAGAGACTGTATTTGTATCAGCTGCTTCTGGTGCAGTAGGTCAACTTGTAGGACAGTTTGCGAAGATGGCGGGATGCTATGTCGTTGGAAGTGCCAGTAGTAAAGAGAAGGTTGATCTTCTCAAGACTAAGTTCGGGTATGACGAAGCTTTCAATTACAAGGAAGAGCATGATCTTAGTGCTGCCCTAAAGAGGTGTTTCCCAGAAGGAATAGACATATACTTTGAGAATGTGGGAGGTAAAATGTTAGACGCAGTGCTCGAAAACATGAGAACACATGGCCGAATCGCTGCGTGTGGAATGATCTCACAATACAATCTAAAGGAGCCAGAAGGTGTACATAACTTAGCCAGCATTGTTTACAAACGGATTCGGGTTCAAGGTTTTGCAGCTGTAGAATTCTTTGATAAATACTCCAAGTTTTTGGACTTTATACTTCCATATGTAAGAGAAGGAAAGATAACATATGTCGAGGATATAGCTCAAGGACTTGAGAATGGACCTTCTGCTTTGATTGGACTCTTCCACGGTAAGAACGTCGGGAAACAACTTGTTGCGGTTGCTCGTGAGTGA

Protein Analysis

353

Amino Acids

38.58

Weight (kDa)

8.08

Isoelectric Point (pI)

32.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 14 - 122 3.6e-18 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 175 - 308 3.3e-25 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 209 - 346 7.1e-06 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 226
Acc36I ACCTGC 1 cut(s) 226
AccB7I CCANNNNNTGG 1 cut(s) 260
AccII CGCG 1 cut(s) 234
AciI CCGC 5 cut(s) 99, 140, 184, 560, 1046
AclWI GGATC 3 cut(s) 126, 139, 167
AcoI YGGCCR 1 cut(s) 769
AcsI RAATTY 1 cut(s) 887
AfaI GTAC 2 cut(s) 123, 828
AfiI CCNNNNNNNGG 3 cut(s) 260, 488, 681
AflIII ACRYGT 1 cut(s) 118
AgsI TTSAA 3 cut(s) 385, 643, 869
AhdI GACNNNNNGTC 1 cut(s) 211
AjnI CCWGG 1 cut(s) 39
AjuI GAANNNNNNNTTGG 2 cut(s) 358, 390
AluBI AGCT 4 cut(s) 512, 638, 881, 971
AluI AGCT 4 cut(s) 512, 638, 881, 971
Alw21I GWGCWC 1 cut(s) 750
Alw26I GTCTC 2 cut(s) 449, 488
AlwI GGATC 3 cut(s) 126, 139, 167
AoxI GGCC 1 cut(s) 769
ApeKI GCWGC 4 cut(s) 512, 671, 779, 878
ApoI RAATTY 1 cut(s) 887
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
AspLEI GCGC 1 cut(s) 236
AspS9I GGNCC 1 cut(s) 989
AsuC2I CCSGG 2 cut(s) 129, 441
AsuHPI GGTGA 2 cut(s) 55, 207
AvaII GGWCC 1 cut(s) 989
BamHI GGATCC 1 cut(s) 131
BauI CACGAG 1 cut(s) 1053
Bbv12I GWGCWC 1 cut(s) 750
BbvI GCAGC 4 cut(s) 499, 658, 766, 890
BccI CCATC 2 cut(s) 333, 550
BciT130I CCWGG 1 cut(s) 41
BcnI CCSGG 2 cut(s) 129, 441
BcoDI GTCTC 2 cut(s) 449, 488
BfaI CTAG 1 cut(s) 146
BfmI CTRYAG 1 cut(s) 882
BfuAI ACCTGC 1 cut(s) 226
BisI GCNGC 6 cut(s) 99, 184, 513, 672, 780, 879
BlsI GCNGC 6 cut(s) 100, 185, 514, 673, 781, 880
Bme1390I CCNGG 3 cut(s) 41, 129, 441
Bme18I GGWCC 1 cut(s) 989
BmeRI GACNNNNNGTC 1 cut(s) 211
BmgT120I GGNCC 1 cut(s) 989
BmiI GGNNCC 2 cut(s) 133, 816
BmrFI CCNGG 3 cut(s) 41, 129, 441
BmsI GCATC 1 cut(s) 554
BpuEI CTTGAG 3 cut(s) 596, 957, 1001
BpuMI CCSGG 2 cut(s) 129, 441
BsaAI YACGTR 2 cut(s) 61, 119
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 2 cut(s) 135, 1015
BsaXI ACNNNNNCTCC 4 cut(s) 352, 382, 483, 513
Bsc4I CCNNNNNNNGG 3 cut(s) 260, 488, 681
Bse1I ACTGG 2 cut(s) 427, 585
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 2 cut(s) 135, 1015
BseGI GGATG 3 cut(s) 295, 344, 569
BseLI CCNNNNNNNGG 3 cut(s) 260, 488, 681
BseNI ACTGG 2 cut(s) 427, 585
BseXI GCAGC 4 cut(s) 499, 658, 766, 890
BsgI GTGCAG 1 cut(s) 543
Bsh1236I CGCG 1 cut(s) 234
BshFI GGCC 1 cut(s) 771
BsiHKAI GWGCWC 1 cut(s) 750
BsiSI CCGG 2 cut(s) 129, 440
BslI CCNNNNNNNGG 3 cut(s) 260, 488, 681
BsmAI GTCTC 2 cut(s) 449, 488
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 1 cut(s) 771
Bso31I GGTCTC 1 cut(s) 449
Bsp1286I GDGCHC 1 cut(s) 750
Bsp1407I TGTACA 1 cut(s) 826
Bsp143I GATC 5 cut(s) 131, 172, 604, 661, 792
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 5 cut(s) 99, 140, 184, 560, 1046
BspANI GGCC 1 cut(s) 771
BspFNI CGCG 1 cut(s) 234
BspLI GGNNCC 2 cut(s) 133, 816
BspMI ACCTGC 1 cut(s) 226
BspPI GGATC 3 cut(s) 126, 139, 167
BspQI GCTCTTC 1 cut(s) 648
BspTNI GGTCTC 1 cut(s) 449
BsrGI TGTACA 1 cut(s) 826
BsrI ACTGG 2 cut(s) 427, 585
BssECI CCNNGG 2 cut(s) 135, 1015
BssMI GATC 5 cut(s) 131, 172, 604, 661, 792
BssSI CACGAG 1 cut(s) 1053
BssT1I CCWWGG 1 cut(s) 135
Bst2BI CACGAG 1 cut(s) 1053
Bst2UI CCWGG 1 cut(s) 41
Bst4CI ACNGT 4 cut(s) 109, 499, 546, 1019
Bst6I CTCTTC 4 cut(s) 325, 339, 648, 1016
BstAUI TGTACA 1 cut(s) 826
BstBAI YACGTR 2 cut(s) 61, 119
BstC8I GCNNGC 3 cut(s) 232, 251, 841
BstDEI CTNAG 3 cut(s) 618, 665, 835
BstDSI CCRYGG 2 cut(s) 135, 1015
BstF5I GGATG 3 cut(s) 295, 344, 569
BstFNI CGCG 1 cut(s) 234
BstHHI GCGC 1 cut(s) 236
BstKTI GATC 5 cut(s) 134, 175, 607, 664, 795
BstMAI GTCTC 2 cut(s) 449, 488
BstMBI GATC 5 cut(s) 131, 172, 604, 661, 792
BstMWI GCNNNNNNNGC 4 cut(s) 189, 227, 521, 557
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 3 cut(s) 39, 127, 439
BstSFI CTRYAG 1 cut(s) 882
BstUI CGCG 1 cut(s) 234
BstV1I GCAGC 4 cut(s) 499, 658, 766, 890
BstX2I RGATCY 1 cut(s) 131
BstXI CCANNNNNNTGG 1 cut(s) 913
BstYI RGATCY 1 cut(s) 131
BsuRI GGCC 1 cut(s) 771
BtgI CCRYGG 2 cut(s) 135, 1015
BtgZI GCGATG 1 cut(s) 79
BtsCI GGATG 3 cut(s) 295, 344, 569
BtsI GCAGTG 2 cut(s) 447, 750
BtsIMutI CAGTG 4 cut(s) 396, 420, 447, 750
BveI ACCTGC 1 cut(s) 226
Cac8I GCNNGC 3 cut(s) 232, 251, 841
CfoI GCGC 1 cut(s) 236
Cfr13I GGNCC 1 cut(s) 989
CseI GACGC 1 cut(s) 749
CsiI ACCWGGT 1 cut(s) 39
Csp6I GTAC 2 cut(s) 122, 827
CviAII CATG 6 cut(s) 136, 193, 291, 659, 757, 767
CviQI GTAC 2 cut(s) 122, 827
DdeI CTNAG 3 cut(s) 618, 665, 835
DpnI GATC 5 cut(s) 133, 174, 606, 663, 794
DpnII GATC 5 cut(s) 131, 172, 604, 661, 792
DriI GACNNNNNGTC 1 cut(s) 211
EaeI YGGCCR 1 cut(s) 769
Eam1104I CTCTTC 4 cut(s) 325, 339, 648, 1016
Eam1105I GACNNNNNGTC 1 cut(s) 211
EarI CTCTTC 4 cut(s) 325, 339, 648, 1016
Eco130I CCWWGG 1 cut(s) 135
Eco31I GGTCTC 1 cut(s) 449
Eco47I GGWCC 1 cut(s) 989
EcoRI GAATTC 1 cut(s) 887
EcoRII CCWGG 1 cut(s) 39
EcoT14I CCWWGG 1 cut(s) 135
ErhI CCWWGG 1 cut(s) 135
FaeI CATG 6 cut(s) 139, 196, 294, 662, 760, 770
FatI CATG 6 cut(s) 135, 192, 290, 658, 756, 766
FauI CCCGC 1 cut(s) 553
FauNDI CATATG 2 cut(s) 931, 955
Fnu4HI GCNGC 6 cut(s) 99, 184, 513, 672, 780, 879
FokI GGATG 3 cut(s) 282, 351, 576
Fsp4HI GCNGC 6 cut(s) 99, 184, 513, 672, 780, 879
FspBI CTAG 1 cut(s) 146
GlaI GCGC 1 cut(s) 235
GluI GCNGC 6 cut(s) 99, 184, 513, 672, 780, 879
HaeIII GGCC 1 cut(s) 771
HapII CCGG 2 cut(s) 129, 440
HgaI GACGC 1 cut(s) 749
HhaI GCGC 1 cut(s) 236
Hin1II CATG 6 cut(s) 139, 196, 294, 662, 760, 770
Hin6I GCGC 1 cut(s) 234
HinP1I GCGC 1 cut(s) 234
HincII GTYRAC 2 cut(s) 112, 533
HindII GTYRAC 2 cut(s) 112, 533
HindIII AAGCTT 1 cut(s) 636
HinfI GANTC 9 cut(s) 46, 69, 80, 154, 287, 388, 774, 859, 1008
HpaII CCGG 2 cut(s) 129, 440
HphI GGTGA 2 cut(s) 55, 207
Hpy166II GTNNAC 5 cut(s) 112, 122, 533, 827, 850
Hpy188I TCNGA 2 cut(s) 85, 483
Hpy188III TCNNGA 6 cut(s) 151, 261, 385, 613, 1030, 1055
Hpy8I GTNNAC 5 cut(s) 112, 122, 533, 827, 850
Hpy99I CGWCG 2 cut(s) 230, 1031
HpyAV CCTTC 7 cut(s) 219, 381, 592, 689, 815, 935, 1002
HpyCH4III ACNGT 4 cut(s) 109, 499, 546, 1019
HpyCH4IV ACGT 3 cut(s) 60, 118, 1026
HpyCH4V TGCA 2 cut(s) 524, 878
HpyF10VI GCNNNNNNNGC 4 cut(s) 189, 227, 521, 557
HpyF3I CTNAG 3 cut(s) 618, 665, 835
HpySE526I ACGT 3 cut(s) 60, 118, 1026
Hsp92II CATG 6 cut(s) 139, 196, 294, 662, 760, 770
HspAI GCGC 1 cut(s) 234
Kzo9I GATC 5 cut(s) 131, 172, 604, 661, 792
LguI GCTCTTC 1 cut(s) 648
LmnI GCTCC 1 cut(s) 814
Lsp1109I GCAGC 4 cut(s) 499, 658, 766, 890
LweI GCATC 1 cut(s) 554
MabI ACCWGGT 1 cut(s) 39
MaeI CTAG 1 cut(s) 146
MaeII ACGT 3 cut(s) 60, 118, 1026
MaeIII GTNAC 3 cut(s) 19, 53, 213
MalI GATC 5 cut(s) 133, 174, 606, 663, 794
MboI GATC 5 cut(s) 131, 172, 604, 661, 792
MboII GAAGA 8 cut(s) 342, 356, 366, 496, 565, 599, 665, 1003
MflI RGATCY 1 cut(s) 131
MhlI GDGCHC 1 cut(s) 750
MluCI AATT 3 cut(s) 301, 643, 887
MlyI GAGTC 1 cut(s) 1002
MmeI TCCRAC 4 cut(s) 108, 316, 389, 556
MnlI CCTC 5 cut(s) 98, 135, 675, 719, 955
MslI CAYNNNNRTG 2 cut(s) 191, 399
MspA1I CMGCKG 2 cut(s) 512, 881
MspI CCGG 2 cut(s) 129, 440
MspR9I CCNGG 3 cut(s) 41, 129, 441
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 1 cut(s) 41
MvnI CGCG 1 cut(s) 234
MwoI GCNNNNNNNGC 4 cut(s) 189, 227, 521, 557
NciI CCSGG 2 cut(s) 129, 441
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 2 cut(s) 931, 955
NdeII GATC 5 cut(s) 131, 172, 604, 661, 792
NlaIII CATG 6 cut(s) 139, 196, 294, 662, 760, 770
NlaIV GGNNCC 2 cut(s) 133, 816
NmuCI GTSAC 2 cut(s) 19, 213
PaqCI CACCTGC 1 cut(s) 226
PciSI GCTCTTC 1 cut(s) 648
PcsI WCGNNNNNNNCGW 3 cut(s) 630, 747, 1023
PctI GAATGC 1 cut(s) 186
PfeI GAWTC 8 cut(s) 46, 69, 80, 154, 287, 388, 774, 859
PflMI CCANNNNNTGG 1 cut(s) 260
PfoI TCCNGGA 1 cut(s) 127
PkrI GCNGC 6 cut(s) 100, 185, 514, 673, 781, 880
PleI GAGTC 1 cut(s) 1002
PpsI GAGTC 1 cut(s) 1002
Ppu21I YACGTR 2 cut(s) 61, 119
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
PspN4I GGNNCC 2 cut(s) 133, 816
PspPI GGNCC 1 cut(s) 989
PsuI RGATCY 1 cut(s) 131
PvuII CAGCTG 2 cut(s) 512, 881
RsaI GTAC 2 cut(s) 123, 828
RsaNI GTAC 2 cut(s) 122, 827
RseI CAYNNNNRTG 2 cut(s) 191, 399
SapI GCTCTTC 1 cut(s) 648
SatI GCNGC 6 cut(s) 99, 184, 513, 672, 780, 879
Sau3AI GATC 5 cut(s) 131, 172, 604, 661, 792
Sau96I GGNCC 1 cut(s) 989
SchI GAGTC 1 cut(s) 1002
ScrFI CCNGG 3 cut(s) 41, 129, 441
SduI GDGCHC 1 cut(s) 750
SexAI ACCWGGT 1 cut(s) 39
SfaNI GCATC 1 cut(s) 554
SfcI CTRYAG 1 cut(s) 882
SinI GGWCC 1 cut(s) 989
SmiMI CAYNNNNRTG 2 cut(s) 191, 399
SmlI CTYRAG 3 cut(s) 611, 972, 980
SmoI CTYRAG 3 cut(s) 611, 972, 980
Sse9I AATT 3 cut(s) 301, 643, 887
SsiI CCGC 5 cut(s) 99, 140, 184, 560, 1046
SspMI CTAG 1 cut(s) 146
StyD4I CCNGG 3 cut(s) 39, 127, 439
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 4 cut(s) 109, 499, 546, 1019
TaiI ACGT 3 cut(s) 63, 121, 1029
TaqI TCGA 2 cut(s) 750, 960
TasI AATT 3 cut(s) 301, 643, 887
TatI WGTACW 1 cut(s) 826
TauI GCSGC 2 cut(s) 101, 186
TfiI GAWTC 8 cut(s) 46, 69, 80, 154, 287, 388, 774, 859
TscAI CASTG 4 cut(s) 403, 427, 454, 750
TseFI GTSAC 2 cut(s) 19, 213
TseI GCWGC 4 cut(s) 512, 671, 779, 878
Tsp45I GTSAC 2 cut(s) 19, 213
TspDTI ATGAA 2 cut(s) 279, 380
TspGWI ACGGA 3 cut(s) 41, 214, 871
TspRI CASTG 4 cut(s) 403, 427, 454, 750
Van91I CCANNNNNTGG 1 cut(s) 260
VpaK11BI GGWCC 1 cut(s) 989
XapI RAATTY 1 cut(s) 887
XspI CTAG 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.