Rh2DG219300

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000431
Physical Location & Seq
Reverse (-)
21101604 .. 21101936
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG219300.1

Sequence Viewer

Length: 333 bp
ATGCTGGATGCAGTCCTTCTCAACATGAGACCTCATGGCCATATTGCCGTGTGTGGAATGATCTCACACTACAATCTCAATCAGCCACAAGGCTTTAGCAATCTCGTCTCTCTCATCCACAATCGGATTCGTATGGAAGGCTTCGTTGTTTTCGATTACTTCCATCTCTATCCCAAGTTCTTGGACATGGTGTTGCCTTACATCAGAGAAGGAAAAATAGTGTATCTGGAAGATATAGTTGAAGGCCTCGAGAGTGGTCCGGCTGCTCTTGTAGGGCTCTTTAGTGGTCGTAATGTCGGAAAACAAGTAGTTTTGGTTGCTCCAGCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

110

Amino Acids

12.31

Weight (kDa)

6.17

Isoelectric Point (pI)

33.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 37
AgsI TTSAA 1 cut(s) 242
AluBI AGCT 1 cut(s) 326
AluI AGCT 1 cut(s) 326
Alw26I GTCTC 2 cut(s) 22, 112
Ama87I CYCGRG 1 cut(s) 248
AoxI GGCC 2 cut(s) 37, 244
ApeKI GCWGC 1 cut(s) 263
AspS9I GGNCC 1 cut(s) 257
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 1 cut(s) 257
BalI TGGCCA 1 cut(s) 39
BanII GRGCYC 1 cut(s) 279
BbvI GCAGC 1 cut(s) 250
BccI CCATC 1 cut(s) 171
BceAI ACGGC 1 cut(s) 32
BcoDI GTCTC 2 cut(s) 22, 112
BisI GCNGC 1 cut(s) 264
BlsI GCNGC 1 cut(s) 265
Bme18I GGWCC 1 cut(s) 257
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 1 cut(s) 257
BpmI CTGGAG 1 cut(s) 306
BsaI GGTCTC 1 cut(s) 22
BseGI GGATG 2 cut(s) 13, 114
BseXI GCAGC 1 cut(s) 250
BshFI GGCC 2 cut(s) 39, 246
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 1 cut(s) 260
BsmAI GTCTC 2 cut(s) 22, 112
BsmBI CGTCTC 1 cut(s) 112
BsnI GGCC 2 cut(s) 39, 246
Bso31I GGTCTC 1 cut(s) 22
BsoBI CYCGRG 1 cut(s) 248
Bsp1286I GDGCHC 1 cut(s) 279
Bsp143I GATC 1 cut(s) 60
BspANI GGCC 2 cut(s) 39, 246
BspTNI GGTCTC 1 cut(s) 22
BssMI GATC 1 cut(s) 60
BstF5I GGATG 2 cut(s) 13, 114
BstKTI GATC 1 cut(s) 63
BstMAI GTCTC 2 cut(s) 22, 112
BstMBI GATC 1 cut(s) 60
BstV1I GCAGC 1 cut(s) 250
BstXI CCANNNNNNTGG 1 cut(s) 181
BsuRI GGCC 2 cut(s) 39, 246
BtsCI GGATG 2 cut(s) 13, 114
Cfr13I GGNCC 1 cut(s) 257
CviAII CATG 3 cut(s) 25, 35, 187
CviJI RGCY 8 cut(s) 39, 85, 93, 141, 246, 263, 277, 326
CviKI_1 RGCY 8 cut(s) 39, 85, 93, 141, 246, 263, 277, 326
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
EaeI YGGCCR 1 cut(s) 37
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 1 cut(s) 279
Eco31I GGTCTC 1 cut(s) 22
Eco47I GGWCC 1 cut(s) 257
Eco88I CYCGRG 1 cut(s) 248
EcoT38I GRGCYC 1 cut(s) 279
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 3 cut(s) 28, 38, 190
FaiI YATR 6 cut(s) 26, 36, 42, 134, 188, 236
FatI CATG 3 cut(s) 24, 34, 186
Fnu4HI GCNGC 1 cut(s) 264
FokI GGATG 2 cut(s) 20, 101
FriOI GRGCYC 1 cut(s) 279
Fsp4HI GCNGC 1 cut(s) 264
GluI GCNGC 1 cut(s) 264
GsuI CTGGAG 1 cut(s) 306
HaeIII GGCC 2 cut(s) 39, 246
HapII CCGG 1 cut(s) 260
Hin1II CATG 3 cut(s) 28, 38, 190
HinfI GANTC 1 cut(s) 127
HpaII CCGG 1 cut(s) 260
Hpy188I TCNGA 3 cut(s) 126, 206, 299
Hpy188III TCNNGA 2 cut(s) 227, 250
HpyAV CCTTC 4 cut(s) 26, 131, 203, 236
HpyCH4V TGCA 1 cut(s) 11
Hsp92II CATG 3 cut(s) 28, 38, 190
Kzo9I GATC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 325
LpnPI CCDG 2 cut(s) 212, 273
Lsp1109I GCAGC 1 cut(s) 250
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MboII GAAGA 1 cut(s) 242
MhlI GDGCHC 1 cut(s) 279
MlsI TGGCCA 1 cut(s) 39
MluNI TGGCCA 1 cut(s) 39
MmeI TCCRAC 1 cut(s) 277
MnlI CCTC 2 cut(s) 42, 257
Mox20I TGGCCA 1 cut(s) 39
MscI TGGCCA 1 cut(s) 39
Msp20I TGGCCA 1 cut(s) 39
MspA1I CMGCKG 1 cut(s) 326
MspI CCGG 1 cut(s) 260
NdeII GATC 1 cut(s) 60
NlaIII CATG 3 cut(s) 28, 38, 190
PaeR7I CTCGAG 1 cut(s) 248
PceI AGGCCT 1 cut(s) 246
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PfeI GAWTC 1 cut(s) 127
PkrI GCNGC 1 cut(s) 265
PspPI GGNCC 1 cut(s) 257
PvuII CAGCTG 1 cut(s) 326
SatI GCNGC 1 cut(s) 264
Sau3AI GATC 1 cut(s) 60
Sau96I GGNCC 1 cut(s) 257
SduI GDGCHC 1 cut(s) 279
SetI ASST 2 cut(s) 34, 328
Sfr274I CTCGAG 1 cut(s) 248
SinI GGWCC 1 cut(s) 257
SlaI CTCGAG 1 cut(s) 248
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
SseBI AGGCCT 1 cut(s) 246
StuI AGGCCT 1 cut(s) 246
TaqI TCGA 2 cut(s) 153, 249
TfiI GAWTC 1 cut(s) 127
TseI GCWGC 1 cut(s) 263
VpaK11BI GGWCC 1 cut(s) 257
XhoI CTCGAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.