AT3G59845

NADP-dependent alkenal double bond reductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
22106243 .. 22107939
1697 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G59845.2

Sequence Viewer

Length: 1041 bp
ATGGAGACCACCGTGAAAAACAAGCAAGTGATACTGAGAAATTATGTGAAGGGTATCCCTAAAGAATCTGACCTAATGATTATCACAGCTTCAGACCCCGTGGAACTCAAGGTTAAGCCCGGATCAGCGGCGGTTATGGTGAGGAATCTTTACTTGTCTTGTGACCCTTACATGGGGATTCTCATGAGAGAACCAACTCCTTCCACTCTAGCACTTTTGGATGCCTTCATCCCCGGAAAGCCTATAGCTGGAATTGGAGTGTCTCAAGTAATAGATTCTGATGATCCATCTTTTACGAAAGGCGATATGATTTGGGGAATTGTGAACTGGGAGGAGTTTAGTACTATCAACCCGGCTGCTATATTCAAAATCGACGTCAATATCAATGTTCCTCTCAGCTACTATACTGGAATCCTCGGTATGATAGGTTTAACTGCTTACGCCGGGTTTTTCGAGATATGTTCACCTAAGAAAGGAGACACAGTGTTCGTGTCTGCTGCTTCTGGCGCGGTTGGACAGCTCGTGGGTCAGTTTGCAAAGTTGATGGGCTGCTATGTTGTTGGAAGTGCCGGAAGTAAACAAAAGGTCGATCTCCTGCTGAACAAATTCGGTTACGATGATGCATTCAATTATAAGGAAGAGCCTGACCTTGACTCCGCCTTGAAGAGGTGTGTACCAAAAGGTATTGACATATACTTTGAGAACGTGGGAGGCAAAATGCTTGACGCGGTTCTACTTAACATGAAAACGTATGGACGAATCGCTGTATGTGGGATGATATCTCAGTACCATCTTGAAACCAGAGACAGGTTACAAAATCTACCTGACATCATATTCAAGAAGATAAGGATGCAAGGGTTTGCTTCTTATGACTTTATAGATAGATTCCCAAAGTTCTTGGAGTTTGTTCTTCCCTACATAAAAGAAGAGAAATTAGCGTACGTGGAAGACATTGTTGAAGGACTCGAGAATGGTCCTGCTGCTCTTGTAGGACTTCTTCATGGAAAAAACGTTGGTAAGCAAGTTCTCAAGGTTGCTTGA

Protein Analysis

346

Amino Acids

38.06

Weight (kDa)

5.87

Isoelectric Point (pI)

24.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_zinc_N PF00107 68 - 201 4.7e-25 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 102 - 241 5.8e-06 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 633
AatII GACGTC 1 cut(s) 378
AccII CGCG 2 cut(s) 509, 728
AciI CCGC 5 cut(s) 128, 131, 509, 657, 728
AclI AACGTT 1 cut(s) 1011
AclWI GGATC 2 cut(s) 130, 278
AcsI RAATTY 1 cut(s) 605
AcuI CTGAAG 1 cut(s) 75
AcyI GRCGYC 1 cut(s) 375
AfaI GTAC 4 cut(s) 343, 675, 788, 941
AfiI CCNNNNNNNGG 6 cut(s) 172, 173, 248, 473, 666, 807
AgsI TTSAA 6 cut(s) 367, 628, 664, 797, 838, 959
AluBI AGCT 4 cut(s) 89, 248, 399, 520
AluI AGCT 4 cut(s) 89, 248, 399, 520
Alw26I GTCTC 3 cut(s) 267, 471, 798
AlwI GGATC 2 cut(s) 130, 278
Ama87I CYCGRG 1 cut(s) 965
ApeKI GCWGC 4 cut(s) 356, 497, 549, 980
ApoI RAATTY 1 cut(s) 605
ArsI GACNNNNNNTTYG 6 cut(s) 360, 392, 470, 502, 680, 712
Asp700I GAANNNNTTC 1 cut(s) 605
AspLEI GCGC 1 cut(s) 509
AspS9I GGNCC 1 cut(s) 974
AsuC2I CCSGG 4 cut(s) 120, 234, 353, 445
AsuHPI GGTGA 2 cut(s) 151, 456
AvaI CYCGRG 1 cut(s) 965
AvaII GGWCC 1 cut(s) 974
BarI GAAGNNNNNNTAC 2 cut(s) 981, 1013
BauI CACGAG 1 cut(s) 521
BbsI GAAGAC 1 cut(s) 954
BbvI GCAGC 4 cut(s) 343, 484, 536, 967
BccI CCATC 3 cut(s) 295, 538, 798
BciVI GTATCC 1 cut(s) 65
BcnI CCSGG 4 cut(s) 120, 234, 353, 445
BcoDI GTCTC 3 cut(s) 267, 471, 798
BfaI CTAG 1 cut(s) 209
BfmI CTRYAG 1 cut(s) 243
BfuI GTATCC 1 cut(s) 65
BisI GCNGC 5 cut(s) 129, 357, 498, 550, 981
BlsI GCNGC 5 cut(s) 130, 358, 499, 551, 982
BmcAI AGTACT 1 cut(s) 343
Bme1390I CCNGG 4 cut(s) 120, 234, 353, 445
Bme18I GGWCC 1 cut(s) 974
BmeT110I CYCGRG 1 cut(s) 965
BmgT120I GGNCC 1 cut(s) 974
BmrFI CCNGG 4 cut(s) 120, 234, 353, 445
BmrI ACTGGG 1 cut(s) 337
BmsI GCATC 3 cut(s) 211, 610, 840
BmuI ACTGGG 1 cut(s) 337
BpiI GAAGAC 1 cut(s) 954
BpuEI CTTGAG 3 cut(s) 92, 249, 1013
BpuMI CCSGG 4 cut(s) 120, 234, 353, 445
BsaAI YACGTR 1 cut(s) 943
BsaHI GRCGYC 1 cut(s) 375
BsaJI CCNNGG 3 cut(s) 99, 232, 415
BsaXI ACNNNNNCTCC 4 cut(s) 468, 498, 638, 668
Bsc4I CCNNNNNNNGG 6 cut(s) 172, 173, 248, 473, 666, 807
Bse1I ACTGG 2 cut(s) 332, 412
BseDI CCNNGG 3 cut(s) 99, 232, 415
BseGI GGATG 4 cut(s) 226, 228, 780, 855
BseLI CCNNNNNNNGG 6 cut(s) 172, 173, 248, 473, 666, 807
BseMII CTCAG 3 cut(s) 26, 409, 797
BseNI ACTGG 2 cut(s) 332, 412
BseRI GAGGAG 1 cut(s) 347
BseXI GCAGC 4 cut(s) 343, 484, 536, 967
Bsh1236I CGCG 2 cut(s) 509, 728
BsiHKCI CYCGRG 1 cut(s) 965
BsiSI CCGG 5 cut(s) 120, 234, 353, 444, 570
BsiWI CGTACG 1 cut(s) 939
BslI CCNNNNNNNGG 6 cut(s) 172, 173, 248, 473, 666, 807
BsmAI GTCTC 3 cut(s) 267, 471, 798
BsmI GAATGC 1 cut(s) 623
BsoBI CYCGRG 1 cut(s) 965
Bsp143I GATC 3 cut(s) 122, 283, 589
BspACI CCGC 5 cut(s) 128, 131, 509, 657, 728
BspCNI CTCAG 3 cut(s) 27, 408, 796
BspFNI CGCG 2 cut(s) 509, 728
BspHI TCATGA 1 cut(s) 183
BspPI GGATC 2 cut(s) 130, 278
BspQI GCTCTTC 1 cut(s) 633
BsrI ACTGG 2 cut(s) 332, 412
BssECI CCNNGG 3 cut(s) 99, 232, 415
BssMI GATC 3 cut(s) 122, 283, 589
BssNI GRCGYC 1 cut(s) 375
BssSI CACGAG 1 cut(s) 521
Bst2BI CACGAG 1 cut(s) 521
Bst4CI ACNGT 2 cut(s) 13, 484
Bst6I CTCTTC 3 cut(s) 633, 659, 921
BstACI GRCGYC 1 cut(s) 375
BstBAI YACGTR 1 cut(s) 943
BstDEI CTNAG 4 cut(s) 35, 395, 468, 783
BstDSI CCRYGG 1 cut(s) 99
BstENI CCTNNNNNAGG 2 cut(s) 471, 664
BstF5I GGATG 4 cut(s) 226, 228, 780, 855
BstFNI CGCG 2 cut(s) 509, 728
BstHHI GCGC 1 cut(s) 509
BstKTI GATC 3 cut(s) 125, 286, 592
BstMAI GTCTC 3 cut(s) 267, 471, 798
BstMBI GATC 3 cut(s) 122, 283, 589
BstMWI GCNNNNNNNGC 1 cut(s) 506
BstSCI CCNGG 4 cut(s) 118, 232, 351, 443
BstSFI CTRYAG 1 cut(s) 243
BstUI CGCG 2 cut(s) 509, 728
BstV1I GCAGC 4 cut(s) 343, 484, 536, 967
BstV2I GAAGAC 1 cut(s) 954
BsuI GTATCC 1 cut(s) 65
BtgI CCRYGG 1 cut(s) 99
BtsCI GGATG 4 cut(s) 226, 228, 780, 855
BtsIMutI CAGTG 1 cut(s) 489
CciI TCATGA 1 cut(s) 183
CfoI GCGC 1 cut(s) 509
Cfr13I GGNCC 1 cut(s) 974
CseI GACGC 1 cut(s) 734
Csp6I GTAC 4 cut(s) 342, 674, 787, 940
CviAII CATG 4 cut(s) 172, 184, 742, 1001
CviJI RGCY 9 cut(s) 89, 118, 241, 248, 356, 399, 520, 549, 643
CviKI_1 RGCY 9 cut(s) 89, 118, 241, 248, 356, 399, 520, 549, 643
CviQI GTAC 4 cut(s) 342, 674, 787, 940
DdeI CTNAG 4 cut(s) 35, 395, 468, 783
DpnI GATC 3 cut(s) 124, 285, 591
DpnII GATC 3 cut(s) 122, 283, 589
Eam1104I CTCTTC 3 cut(s) 633, 659, 921
EarI CTCTTC 3 cut(s) 633, 659, 921
EciI GGCGGA 1 cut(s) 646
Eco32I GATATC 1 cut(s) 780
Eco47I GGWCC 1 cut(s) 974
Eco57I CTGAAG 1 cut(s) 75
Eco88I CYCGRG 1 cut(s) 965
EcoNI CCTNNNNNAGG 2 cut(s) 471, 664
EcoRV GATATC 1 cut(s) 780
EcoT22I ATGCAT 1 cut(s) 625
FaeI CATG 4 cut(s) 175, 187, 745, 1004
FatI CATG 4 cut(s) 171, 183, 741, 1000
Fnu4HI GCNGC 5 cut(s) 129, 357, 498, 550, 981
FokI GGATG 4 cut(s) 215, 233, 787, 862
Fsp4HI GCNGC 5 cut(s) 129, 357, 498, 550, 981
FspBI CTAG 1 cut(s) 209
GlaI GCGC 1 cut(s) 508
GluI GCNGC 5 cut(s) 129, 357, 498, 550, 981
HapII CCGG 5 cut(s) 120, 234, 353, 444, 570
HgaI GACGC 1 cut(s) 734
HhaI GCGC 1 cut(s) 509
Hin1I GRCGYC 1 cut(s) 375
Hin1II CATG 4 cut(s) 175, 187, 745, 1004
Hin6I GCGC 1 cut(s) 507
HinP1I GCGC 1 cut(s) 507
HinfI GANTC 9 cut(s) 65, 145, 178, 275, 411, 653, 759, 885, 963
HpaII CCGG 5 cut(s) 120, 234, 353, 444, 570
HphI GGTGA 2 cut(s) 151, 456
Hpy166II GTNNAC 4 cut(s) 325, 464, 578, 674
Hpy188I TCNGA 3 cut(s) 70, 94, 280
Hpy188III TCNNGA 5 cut(s) 184, 454, 794, 838, 967
Hpy8I GTNNAC 4 cut(s) 325, 464, 578, 674
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 4 cut(s) 43, 210, 235, 953
HpyCH4III ACNGT 2 cut(s) 13, 484
HpyCH4IV ACGT 5 cut(s) 375, 705, 749, 942, 1011
HpyCH4V TGCA 3 cut(s) 536, 623, 853
HpyF10VI GCNNNNNNNGC 1 cut(s) 506
HpyF3I CTNAG 4 cut(s) 35, 395, 468, 783
HpySE526I ACGT 5 cut(s) 375, 705, 749, 942, 1011
Hsp92I GRCGYC 1 cut(s) 375
Hsp92II CATG 4 cut(s) 175, 187, 745, 1004
HspAI GCGC 1 cut(s) 507
Kzo9I GATC 3 cut(s) 122, 283, 589
LguI GCTCTTC 1 cut(s) 633
Lsp1109I GCAGC 4 cut(s) 343, 484, 536, 967
LweI GCATC 3 cut(s) 211, 610, 840
MaeI CTAG 1 cut(s) 209
MaeII ACGT 5 cut(s) 375, 705, 749, 942, 1011
MaeIII GTNAC 3 cut(s) 161, 611, 810
MalI GATC 3 cut(s) 124, 285, 591
MboI GATC 3 cut(s) 122, 283, 589
MboII GAAGA 7 cut(s) 650, 676, 853, 902, 938, 959, 989
MluCI AATT 6 cut(s) 40, 252, 318, 605, 628, 932
MlyI GAGTC 2 cut(s) 647, 957
MmeI TCCRAC 2 cut(s) 493, 541
MnlI CCTC 6 cut(s) 135, 325, 402, 425, 660, 704
Mph1103I ATGCAT 1 cut(s) 625
MroXI GAANNNNTTC 1 cut(s) 605
MseI TTAA 3 cut(s) 114, 431, 738
MspA1I CMGCKG 1 cut(s) 128
MspI CCGG 5 cut(s) 120, 234, 353, 444, 570
MspR9I CCNGG 4 cut(s) 120, 234, 353, 445
Mva1269I GAATGC 1 cut(s) 623
MvnI CGCG 2 cut(s) 509, 728
MwoI GCNNNNNNNGC 1 cut(s) 506
NciI CCSGG 4 cut(s) 120, 234, 353, 445
NdeII GATC 3 cut(s) 122, 283, 589
NlaIII CATG 4 cut(s) 175, 187, 745, 1004
NmuCI GTSAC 1 cut(s) 161
NsiI ATGCAT 1 cut(s) 625
PaeR7I CTCGAG 1 cut(s) 965
PagI TCATGA 1 cut(s) 183
PciSI GCTCTTC 1 cut(s) 633
PctI GAATGC 1 cut(s) 623
PdmI GAANNNNTTC 1 cut(s) 605
PfeI GAWTC 7 cut(s) 65, 145, 178, 275, 411, 759, 885
Pfl23II CGTACG 1 cut(s) 939
PkrI GCNGC 5 cut(s) 130, 358, 499, 551, 982
PleI GAGTC 2 cut(s) 647, 957
PpsI GAGTC 2 cut(s) 647, 957
Ppu21I YACGTR 1 cut(s) 943
PsiI TTATAA 1 cut(s) 633
Psp1406I AACGTT 1 cut(s) 1011
PspLI CGTACG 1 cut(s) 939
PspPI GGNCC 1 cut(s) 974
RsaI GTAC 4 cut(s) 343, 675, 788, 941
RsaNI GTAC 4 cut(s) 342, 674, 787, 940
SapI GCTCTTC 1 cut(s) 633
SaqAI TTAA 3 cut(s) 114, 431, 738
SatI GCNGC 5 cut(s) 129, 357, 498, 550, 981
Sau3AI GATC 3 cut(s) 122, 283, 589
Sau96I GGNCC 1 cut(s) 974
ScaI AGTACT 1 cut(s) 343
SchI GAGTC 2 cut(s) 647, 957
ScrFI CCNGG 4 cut(s) 120, 234, 353, 445
SfaNI GCATC 3 cut(s) 211, 610, 840
SfcI CTRYAG 1 cut(s) 243
Sfr274I CTCGAG 1 cut(s) 965
SinI GGWCC 1 cut(s) 974
SlaI CTCGAG 1 cut(s) 965
SmlI CTYRAG 4 cut(s) 107, 264, 965, 1028
SmoI CTYRAG 4 cut(s) 107, 264, 965, 1028
Sse9I AATT 6 cut(s) 40, 252, 318, 605, 628, 932
SsiI CCGC 5 cut(s) 128, 131, 509, 657, 728
SspMI CTAG 1 cut(s) 209
StyD4I CCNGG 4 cut(s) 118, 232, 351, 443
TaaI ACNGT 2 cut(s) 13, 484
TaiI ACGT 5 cut(s) 378, 708, 752, 945, 1014
TaqI TCGA 4 cut(s) 372, 453, 588, 966
TasI AATT 6 cut(s) 40, 252, 318, 605, 628, 932
TatI WGTACW 1 cut(s) 341
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 7 cut(s) 65, 145, 178, 275, 411, 759, 885
Tru1I TTAA 3 cut(s) 114, 431, 738
Tru9I TTAA 3 cut(s) 114, 431, 738
TscAI CASTG 1 cut(s) 489
TseFI GTSAC 1 cut(s) 161
TseI GCWGC 4 cut(s) 356, 497, 549, 980
Tsp45I GTSAC 1 cut(s) 161
TspDTI ATGAA 3 cut(s) 217, 758, 989
TspRI CASTG 1 cut(s) 489
VpaK11BI GGWCC 1 cut(s) 974
XagI CCTNNNNNAGG 2 cut(s) 471, 664
XapI RAATTY 1 cut(s) 605
XhoI CTCGAG 1 cut(s) 965
XmnI GAANNNNTTC 1 cut(s) 605
XspI CTAG 1 cut(s) 209
ZraI GACGTC 1 cut(s) 376
ZrmI AGTACT 1 cut(s) 343
Zsp2I ATGCAT 1 cut(s) 625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.