Rw2G021390

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000431
Physical Location & Seq
Reverse (-)
29643458 .. 29652059
8602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G021390.1

Sequence Viewer

Length: 1011 bp
ATGACGTTAGTGAGAAACAAACAGGTGATATTGAGGAACTATGTCACCACTTTTCCGAAAGATTCGGACTTGTATGTGACCAGCACTACTGCTAGTGTCAAGTTCAAGCTTCCTGCTCACACTATCATTACCACTTCAAAGGAACCAGCCGTCATAGTGAAGAACCTCTACTTGTCTTGCGATCCCTACCAGCGGCTCTTTATGGAAGAAATCCCAGGAGTCGACGAATCTACGTATAGTCAGCGAGTCTACTATACACCCGGCTCGCCAATATATGGGTATGGAGTGGCTGAAATGTTGGATTCACACCACCCAGATTTTAAGGCAGGTGACTTAGTTTGGGGGACTACTAATTGGGAGCAATACAGCCTTATCACTACACCCAAAAGCCTCATCAAAATCCAGCACACTGATACTGATGTACCGCTTTCCTACTATGCTGGAATTCTTGGTACAACTGGTTTGACCGCTTACGTTGGTTTCTATGAATTCTGTTCTCCGAAGAAAGGAGAAAATGTGTTTGTTTCAGCAGCAGCTGGTGCTGTTGGTCAGCTTGTTGGCCAAATTGCTAAACTAATGGGTTGTTGTTTAAGTATAATCAAGTTCGGATTTGATGACGCTTTTAACTATAAGGAAGAGAGTGACTTGGATGTGGCTTTGAAAAGGTATTTTCCTGAAGGCATTGATATATACTTTGACAATGTTGGCGGCAAAATGCTGGATGCGGTCTTTCTCAACATGAGTGTCCATGGCCGAATTGCTGGTTGTGGAATGATTTCACAGTACAATCTTGATCAGCCAGAAGGGGTGACCAATTTGATGCACCTTGTGTACAAGCGTATACGCTTCCATGGATTTACCGTTCGTGATCACTATCATTTGCATCCCAAATTCTTAGACTTCATTCTGCCTTACATTCAACAAGGGAAGATCAATGCTCCAGCAGCACTGTTTGGACTTTTTAAGGGTCACAACATTGGAAAACAAGTAGTTGCAATTGATCATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

336

Amino Acids

37.63

Weight (kDa)

6.45

Isoelectric Point (pI)

31.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 32 - 132 5e-16 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 181 - 301 1.7e-11 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 317
Acc36I ACCTGC 1 cut(s) 317
AccB7I CCANNNNNTGG 1 cut(s) 275
AccI GTMKAC 3 cut(s) 222, 249, 841
AciI CCGC 5 cut(s) 193, 425, 468, 708, 725
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 2 cut(s) 559, 751
AcsI RAATTY 3 cut(s) 444, 488, 890
AcuI CTGAAG 1 cut(s) 696
AdeI CACNNNGTG 1 cut(s) 829
AfaI GTAC 4 cut(s) 423, 454, 785, 833
AfiI CCNNNNNNNGG 3 cut(s) 192, 275, 506
AgsI TTSAA 4 cut(s) 106, 138, 661, 920
AjnI CCWGG 1 cut(s) 214
AloI GAACNNNNNNTCC 2 cut(s) 846, 878
AluBI AGCT 3 cut(s) 109, 536, 553
AluI AGCT 3 cut(s) 109, 536, 553
AlwI GGATC 1 cut(s) 176
AlwNI CAGNNNCTG 1 cut(s) 536
AoxI GGCC 2 cut(s) 559, 751
ApeKI GCWGC 3 cut(s) 530, 533, 944
ApoI RAATTY 3 cut(s) 444, 488, 890
Asp700I GAANNNNTTC 1 cut(s) 775
AsuC2I CCSGG 1 cut(s) 261
AsuHPI GGTGA 4 cut(s) 37, 37, 341, 820
BaeI ACNNNNGTAYC 4 cut(s) 405, 405, 438, 438
BalI TGGCCA 1 cut(s) 561
BarI GAAGNNNNNNTAC 2 cut(s) 152, 184
BbvI GCAGC 3 cut(s) 542, 545, 956
BceAI ACGGC 1 cut(s) 134
BciT130I CCWGG 1 cut(s) 216
BclI TGATCA 3 cut(s) 793, 868, 1000
BcnI CCSGG 1 cut(s) 261
BfaI CTAG 1 cut(s) 93
BfuAI ACCTGC 1 cut(s) 317
BisI GCNGC 5 cut(s) 194, 531, 534, 709, 945
BlsI GCNGC 5 cut(s) 195, 532, 535, 710, 946
Bme1390I CCNGG 2 cut(s) 216, 261
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 2 cut(s) 216, 261
BmsI GCATC 3 cut(s) 712, 810, 892
BpmI CTGGAG 1 cut(s) 924
BpuMI CCSGG 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 234
BsaBI GATNNNNATC 1 cut(s) 873
BsaJI CCNNGG 3 cut(s) 214, 748, 850
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 3 cut(s) 192, 275, 506
Bse1I ACTGG 1 cut(s) 463
Bse8I GATNNNNATC 1 cut(s) 873
BseBI CCWGG 1 cut(s) 216
BseDI CCNNGG 3 cut(s) 214, 748, 850
BseGI GGATG 3 cut(s) 655, 727, 883
BseJI GATNNNNATC 1 cut(s) 873
BseLI CCNNNNNNNGG 3 cut(s) 192, 275, 506
BseNI ACTGG 1 cut(s) 463
BseXI GCAGC 3 cut(s) 542, 545, 956
BshFI GGCC 2 cut(s) 561, 753
BsiSI CCGG 1 cut(s) 261
BslFI GGGAC 1 cut(s) 358
BslI CCNNNNNNNGG 3 cut(s) 192, 275, 506
BsmFI GGGAC 1 cut(s) 358
BsnI GGCC 2 cut(s) 561, 753
Bsp1407I TGTACA 1 cut(s) 831
Bsp143I GATC 5 cut(s) 181, 793, 868, 930, 1000
Bsp19I CCATGG 2 cut(s) 748, 850
BspACI CCGC 5 cut(s) 193, 425, 468, 708, 725
BspANI GGCC 2 cut(s) 561, 753
BspHI TCATGA 1 cut(s) 1003
BspLI GGNNCC 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 317
BspPI GGATC 1 cut(s) 176
BsrGI TGTACA 1 cut(s) 831
BsrI ACTGG 1 cut(s) 463
BssECI CCNNGG 3 cut(s) 214, 748, 850
BssMI GATC 5 cut(s) 181, 793, 868, 930, 1000
BssNAI GTATAC 1 cut(s) 842
BssT1I CCWWGG 2 cut(s) 748, 850
Bst1107I GTATAC 1 cut(s) 842
Bst2UI CCWGG 1 cut(s) 216
Bst4CI ACNGT 3 cut(s) 783, 862, 951
Bst6I CTCTTC 1 cut(s) 630
BstAPI GCANNNNNTGC 1 cut(s) 539
BstAUI TGTACA 1 cut(s) 831
BstBAI YACGTR 1 cut(s) 234
BstC8I GCNNGC 1 cut(s) 266
BstDEI CTNAG 2 cut(s) 334, 895
BstDSI CCRYGG 2 cut(s) 748, 850
BstEII GGTNACC 1 cut(s) 808
BstF5I GGATG 3 cut(s) 655, 727, 883
BstKTI GATC 5 cut(s) 184, 796, 871, 933, 1003
BstMBI GATC 5 cut(s) 181, 793, 868, 930, 1000
BstMWI GCNNNNNNNGC 2 cut(s) 539, 944
BstNI CCWGG 1 cut(s) 216
BstPI GGTNACC 1 cut(s) 808
BstSCI CCNGG 2 cut(s) 214, 259
BstSNI TACGTA 1 cut(s) 234
BstV1I GCAGC 3 cut(s) 542, 545, 956
BstZ17I GTATAC 1 cut(s) 842
BsuRI GGCC 2 cut(s) 561, 753
BtgI CCRYGG 2 cut(s) 748, 850
BtsCI GGATG 3 cut(s) 655, 727, 883
BtsIMutI CAGTG 2 cut(s) 408, 947
BveI ACCTGC 1 cut(s) 317
Cac8I GCNNGC 1 cut(s) 266
CaiI CAGNNNCTG 1 cut(s) 536
CciI TCATGA 1 cut(s) 1003
CseI GACGC 1 cut(s) 626
Csp6I GTAC 4 cut(s) 422, 453, 784, 832
CviAII CATG 4 cut(s) 739, 749, 851, 1004
CviQI GTAC 4 cut(s) 422, 453, 784, 832
DdeI CTNAG 2 cut(s) 334, 895
DpnI GATC 5 cut(s) 183, 795, 870, 932, 1002
DpnII GATC 5 cut(s) 181, 793, 868, 930, 1000
DraIII CACNNNGTG 1 cut(s) 829
EaeI YGGCCR 2 cut(s) 559, 751
Eam1104I CTCTTC 1 cut(s) 630
EarI CTCTTC 1 cut(s) 630
Eco105I TACGTA 1 cut(s) 234
Eco130I CCWWGG 2 cut(s) 748, 850
Eco57I CTGAAG 1 cut(s) 696
Eco91I GGTNACC 1 cut(s) 808
EcoO65I GGTNACC 1 cut(s) 808
EcoRI GAATTC 2 cut(s) 444, 488
EcoRII CCWGG 1 cut(s) 214
EcoT14I CCWWGG 2 cut(s) 748, 850
ErhI CCWWGG 2 cut(s) 748, 850
FaeI CATG 4 cut(s) 742, 752, 854, 1007
FaqI GGGAC 1 cut(s) 358
FatI CATG 4 cut(s) 738, 748, 850, 1003
FbaI TGATCA 3 cut(s) 793, 868, 1000
FblI GTMKAC 3 cut(s) 222, 249, 841
Fnu4HI GCNGC 5 cut(s) 194, 531, 534, 709, 945
FokI GGATG 3 cut(s) 662, 734, 870
Fsp4HI GCNGC 5 cut(s) 194, 531, 534, 709, 945
FspBI CTAG 1 cut(s) 93
GluI GCNGC 5 cut(s) 194, 531, 534, 709, 945
GsuI CTGGAG 1 cut(s) 924
HaeIII GGCC 2 cut(s) 561, 753
HapII CCGG 1 cut(s) 261
HgaI GACGC 1 cut(s) 626
Hin1II CATG 4 cut(s) 742, 752, 854, 1007
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 5 cut(s) 62, 219, 227, 246, 302
HpaII CCGG 1 cut(s) 261
HphI GGTGA 4 cut(s) 37, 37, 341, 820
Hpy166II GTNNAC 4 cut(s) 223, 250, 832, 842
Hpy188I TCNGA 4 cut(s) 57, 67, 501, 608
Hpy188III TCNNGA 4 cut(s) 674, 791, 866, 1004
Hpy8I GTNNAC 4 cut(s) 223, 250, 832, 842
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 2 cut(s) 671, 797
HpyCH4III ACNGT 3 cut(s) 783, 862, 951
HpyCH4IV ACGT 3 cut(s) 5, 233, 474
HpyCH4V TGCA 3 cut(s) 823, 883, 995
HpyF10VI GCNNNNNNNGC 2 cut(s) 539, 944
HpyF3I CTNAG 2 cut(s) 334, 895
HpySE526I ACGT 3 cut(s) 5, 233, 474
Hsp92II CATG 4 cut(s) 742, 752, 854, 1007
Ksp22I TGATCA 3 cut(s) 793, 868, 1000
Kzo9I GATC 5 cut(s) 181, 793, 868, 930, 1000
LmnI GCTCC 2 cut(s) 358, 943
Lsp1109I GCAGC 3 cut(s) 542, 545, 956
LweI GCATC 3 cut(s) 712, 810, 892
MaeI CTAG 1 cut(s) 93
MaeII ACGT 3 cut(s) 5, 233, 474
MaeIII GTNAC 6 cut(s) 43, 76, 329, 641, 808, 968
MalI GATC 5 cut(s) 183, 795, 870, 932, 1002
MboI GATC 5 cut(s) 181, 793, 868, 930, 1000
MboII GAAGA 5 cut(s) 172, 218, 514, 647, 940
MfeI CAATTG 1 cut(s) 996
MlsI TGGCCA 1 cut(s) 561
MluCI AATT 8 cut(s) 352, 444, 488, 564, 756, 814, 890, 996
MluNI TGGCCA 1 cut(s) 561
MlyI GAGTC 2 cut(s) 228, 255
MmeI TCCRAC 1 cut(s) 279
MnlI CCTC 3 cut(s) 27, 176, 401
Mox20I TGGCCA 1 cut(s) 561
MroXI GAANNNNTTC 1 cut(s) 775
MscI TGGCCA 1 cut(s) 561
MseI TTAA 4 cut(s) 321, 590, 624, 963
Msp20I TGGCCA 1 cut(s) 561
MspA1I CMGCKG 2 cut(s) 193, 536
MspI CCGG 1 cut(s) 261
MspR9I CCNGG 2 cut(s) 216, 261
MunI CAATTG 1 cut(s) 996
MvaI CCWGG 1 cut(s) 216
MwoI GCNNNNNNNGC 2 cut(s) 539, 944
NciI CCSGG 1 cut(s) 261
NcoI CCATGG 2 cut(s) 748, 850
NdeII GATC 5 cut(s) 181, 793, 868, 930, 1000
NlaIII CATG 4 cut(s) 742, 752, 854, 1007
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 6 cut(s) 43, 76, 329, 641, 808, 968
PagI TCATGA 1 cut(s) 1003
PaqCI CACCTGC 1 cut(s) 317
PdmI GAANNNNTTC 1 cut(s) 775
PfeI GAWTC 3 cut(s) 62, 227, 302
PflMI CCANNNNNTGG 1 cut(s) 275
PkrI GCNGC 5 cut(s) 195, 532, 535, 710, 946
PleI GAGTC 2 cut(s) 227, 254
PpsI GAGTC 2 cut(s) 227, 254
Ppu21I YACGTR 1 cut(s) 234
Psp6I CCWGG 1 cut(s) 214
PspEI GGTNACC 1 cut(s) 808
PspGI CCWGG 1 cut(s) 214
PspN4I GGNNCC 1 cut(s) 144
PstNI CAGNNNCTG 1 cut(s) 536
PvuII CAGCTG 1 cut(s) 536
RsaI GTAC 4 cut(s) 423, 454, 785, 833
RsaNI GTAC 4 cut(s) 422, 453, 784, 832
SalI GTCGAC 1 cut(s) 221
SaqAI TTAA 4 cut(s) 321, 590, 624, 963
SatI GCNGC 5 cut(s) 194, 531, 534, 709, 945
Sau3AI GATC 5 cut(s) 181, 793, 868, 930, 1000
SchI GAGTC 2 cut(s) 228, 255
ScrFI CCNGG 2 cut(s) 216, 261
SfaNI GCATC 3 cut(s) 712, 810, 892
SnaBI TACGTA 1 cut(s) 234
Sse9I AATT 8 cut(s) 352, 444, 488, 564, 756, 814, 890, 996
SsiI CCGC 5 cut(s) 193, 425, 468, 708, 725
SspMI CTAG 1 cut(s) 93
StyD4I CCNGG 2 cut(s) 214, 259
StyI CCWWGG 2 cut(s) 748, 850
TaaI ACNGT 3 cut(s) 783, 862, 951
TaiI ACGT 3 cut(s) 8, 236, 477
TaqI TCGA 1 cut(s) 222
TasI AATT 8 cut(s) 352, 444, 488, 564, 756, 814, 890, 996
TatI WGTACW 2 cut(s) 783, 831
TauI GCSGC 2 cut(s) 196, 711
TfiI GAWTC 3 cut(s) 62, 227, 302
Tru1I TTAA 4 cut(s) 321, 590, 624, 963
Tru9I TTAA 4 cut(s) 321, 590, 624, 963
TscAI CASTG 2 cut(s) 415, 954
TseFI GTSAC 6 cut(s) 43, 76, 329, 641, 808, 968
TseI GCWGC 3 cut(s) 530, 533, 944
Tsp45I GTSAC 6 cut(s) 43, 76, 329, 641, 808, 968
TspDTI ATGAA 2 cut(s) 501, 892
TspRI CASTG 2 cut(s) 415, 954
Van91I CCANNNNNTGG 1 cut(s) 275
XapI RAATTY 3 cut(s) 444, 488, 890
XmiI GTMKAC 3 cut(s) 222, 249, 841
XmnI GAANNNNTTC 1 cut(s) 775
XspI CTAG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.