Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000431

Physical Location & Seq

Genomic Coordinates Forward (+)

21978659 .. 21980805

Gene Structure 2147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G211500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGGCGAGTAGCGTGGAGGAAGTTAGGAACAAGCAGGTGATATTGAAGGACTATGTGTCTGGCAATCCCAAAGAGTCAGATATGTACGTGACAACCAGTTCCATAAAGCTCAAGGTTCCTCAAGGCTCAAAAGCAGTGGTGCTCAAGAACCTCTACTTGTCATGTGACCCTTATTTGAGGATCCGAATGGATAGAATTCAAGGCTCCAATGTCTTCACTTCCTTCACTCCTGGTTCTCCACTAAGCGGGTTCGGAGTGGCTAAAGTTTTGGATTCTGGGCACCCAGAATTTAAGGAAGGTGACTTGGTTTGGGGAACAACAGGATGGGAAGAGTATAGTCTCATCACAGAACCAGAACAGTTCTTTAAAATCCACCACACTGATGTGCCCCTGTCCTACTACACTGGCCTTCTTGGTATGCCGGGTATGACTGCCTTTGCCGGCTTTCATGAAGTCTGTTCGCCTAAGAAAGGAGATCGCGTGTTCATTTCTGCAGCAGCTGGTGGAGTTGGCCAGCTTGTTGGGCAATTTGCAAAGTTGATGGGGTGTTATGTTGTTGGAAGTGTTGGAAGTAAAGAGAAGGTCGATCTACTAAAGAACAAGCTAGGGTTTGATGAGGCTTTTAATTATAAAGAAGAGCAAGACCTTGATGCTGCTTTGAAAAGGCATTTCCCTGAAGGCATTGACATTTATTTCGAGAATGTTGGAGGAAAAATGCTGGATGCTGTGCTTCTTAACATGAGACCTCATGGTCAAATTTCTGTGTGTGGATTGATCTCACACTACAATCTCAACCAGCCACAAGGCTTTAGCAATCTTCTCTCTCTAATCTACAATCGGATCCGTATGGAAGGCTTTGCCGTTTTCGATTATTTCCATCTGTATCCCAATTTCTTGGACATGGTCATACCATACATCAGAGAAGGAAAGATTGTATATCTGGAAGACATAACTCAAGGCCTTGAGAGTGCTCCAGCAGCTCTTGTGGGACTTTTTAGTGGCAGAAATGTTGGAAAACAAGTAGTTTTGGTTTCCAATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006950 GO:0006979 GO:0008150 GO:0016020 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ADH_N_2 ADH_zinc_N

Protein Analysis

348

Amino Acids

38.41

Weight (kDa)

5.94

Isoelectric Point (pI)

29.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca	FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica	MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica	Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis	pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis	RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata	RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora	Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii	Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa	Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha	Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana	Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	630
AarI	CACCTGC	1 cut(s)	25
AasI	GACNNNNNNGTC	1 cut(s)	750
Acc36I	ACCTGC	1 cut(s)	25
AccB1I	GGYRCC	1 cut(s)	279
AccII	CGCG	1 cut(s)	480
AciI	CCGC	1 cut(s)	246
AclWI	GGATC	4 cut(s)	175, 188, 835, 848
AcoI	YGGCCR	1 cut(s)	511
AcsI	RAATTY	3 cut(s)	195, 287, 756
AcuI	CTGAAG	1 cut(s)	696
AfaI	GTAC	1 cut(s)	86
AfiI	CCNNNNNNNGG	2 cut(s)	245, 470
AgsI	TTSAA	3 cut(s)	46, 200, 661
AhdI	GACNNNNNGTC	1 cut(s)	55
AjnI	CCWGG	1 cut(s)	229
AleI	CACNNNNGTG	1 cut(s)	383
AluBI	AGCT	5 cut(s)	109, 500, 517, 604, 980
AluI	AGCT	5 cut(s)	109, 500, 517, 604, 980
Alw21I	GWGCWC	2 cut(s)	144, 973
Alw26I	GTCTC	2 cut(s)	344, 736
AlwI	GGATC	4 cut(s)	175, 188, 835, 848
AlwNI	CAGNNNCTG	1 cut(s)	500
AoxI	GGCC	3 cut(s)	406, 511, 958
ApeKI	GCWGC	4 cut(s)	494, 497, 653, 977
ApoI	RAATTY	3 cut(s)	195, 287, 756
ArsI	GACNNNNNNTTYG	2 cut(s)	677, 709
AsuC2I	CCSGG	1 cut(s)	423
AsuHPI	GGTGA	2 cut(s)	49, 311
BaeGI	GKGCMC	2 cut(s)	282, 390
BalI	TGGCCA	1 cut(s)	513
BamHI	GGATCC	2 cut(s)	180, 840
BanI	GGYRCC	1 cut(s)	279
BbsI	GAAGAC	2 cut(s)	205, 951
Bbv12I	GWGCWC	2 cut(s)	144, 973
BbvI	GCAGC	4 cut(s)	506, 509, 640, 989
BccI	CCATC	3 cut(s)	318, 535, 885
BceAI	ACGGC	1 cut(s)	845
BciT130I	CCWGG	1 cut(s)	231
BciVI	GTATCC	1 cut(s)	894
BcnI	CCSGG	1 cut(s)	423
BcoDI	GTCTC	2 cut(s)	344, 736
BfaI	CTAG	1 cut(s)	605
BfmI	CTRYAG	1 cut(s)	492
BfuAI	ACCTGC	1 cut(s)	25
BfuI	GTATCC	1 cut(s)	894
BisI	GCNGC	4 cut(s)	495, 498, 654, 978
BlsI	GCNGC	4 cut(s)	496, 499, 655, 979
Bme1390I	CCNGG	2 cut(s)	231, 423
BmeRI	GACNNNNNGTC	1 cut(s)	55
BmiI	GGNNCC	5 cut(s)	117, 182, 205, 281, 842
BmrFI	CCNGG	2 cut(s)	231, 423
BmsI	GCATC	2 cut(s)	640, 712
BpiI	GAAGAC	2 cut(s)	205, 951
BpmI	CTGGAG	1 cut(s)	957
BpuEI	CTTGAG	5 cut(s)	95, 105, 128, 939, 983
BpuMI	CCSGG	1 cut(s)	423
BsaAI	YACGTR	1 cut(s)	88
BsaI	GGTCTC	1 cut(s)	736
BsaXI	ACNNNNNCTCC	2 cut(s)	465, 495
Bsc4I	CCNNNNNNNGG	2 cut(s)	245, 470
Bse118I	RCCGGY	1 cut(s)	440
Bse1I	ACTGG	2 cut(s)	96, 409
BseBI	CCWGG	1 cut(s)	231
BseGI	GGATG	2 cut(s)	329, 727
BseLI	CCNNNNNNNGG	2 cut(s)	245, 470
BseNI	ACTGG	2 cut(s)	96, 409
BseSI	GKGCMC	2 cut(s)	282, 390
BseXI	GCAGC	4 cut(s)	506, 509, 640, 989
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	3 cut(s)	408, 513, 960
BshNI	GGYRCC	1 cut(s)	279
BsiHKAI	GWGCWC	2 cut(s)	144, 973
BsiSI	CCGG	2 cut(s)	422, 441
BslFI	GGGAC	1 cut(s)	1002
BslI	CCNNNNNNNGG	2 cut(s)	245, 470
BsmAI	GTCTC	2 cut(s)	344, 736
BsmFI	GGGAC	1 cut(s)	1002
BsnI	GGCC	3 cut(s)	408, 513, 960
Bso31I	GGTCTC	1 cut(s)	736
Bsp1286I	GDGCHC	4 cut(s)	144, 282, 390, 973
Bsp143I	GATC	5 cut(s)	180, 475, 586, 774, 840
BspACI	CCGC	1 cut(s)	246
BspANI	GGCC	3 cut(s)	408, 513, 960
BspFNI	CGCG	1 cut(s)	480
BspHI	TCATGA	1 cut(s)	448
BspLI	GGNNCC	5 cut(s)	117, 182, 205, 281, 842
BspMAI	CTGCAG	1 cut(s)	496
BspMI	ACCTGC	1 cut(s)	25
BspPI	GGATC	4 cut(s)	175, 188, 835, 848
BspQI	GCTCTTC	1 cut(s)	630
BspT107I	GGYRCC	1 cut(s)	279
BspTNI	GGTCTC	1 cut(s)	736
BsrFI	RCCGGY	1 cut(s)	440
BsrI	ACTGG	2 cut(s)	96, 409
BssAI	RCCGGY	1 cut(s)	440
BssMI	GATC	5 cut(s)	180, 475, 586, 774, 840
Bst2UI	CCWGG	1 cut(s)	231
Bst4CI	ACNGT	1 cut(s)	360
Bst6I	CTCTTC	2 cut(s)	324, 630
BstBAI	YACGTR	1 cut(s)	88
BstC8I	GCNNGC	2 cut(s)	442, 515
BstDEI	CTNAG	2 cut(s)	242, 465
BstENI	CCTNNNNNAGG	1 cut(s)	468
BstF5I	GGATG	2 cut(s)	329, 727
BstFNI	CGCG	1 cut(s)	480
BstKTI	GATC	5 cut(s)	183, 478, 589, 777, 843
BstMAI	GTCTC	2 cut(s)	344, 736
BstMBI	GATC	5 cut(s)	180, 475, 586, 774, 840
BstMWI	GCNNNNNNNGC	2 cut(s)	523, 977
BstNI	CCWGG	1 cut(s)	231
BstSCI	CCNGG	2 cut(s)	229, 421
BstSFI	CTRYAG	1 cut(s)	492
BstSLI	GKGCMC	2 cut(s)	282, 390
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	4 cut(s)	506, 509, 640, 989
BstV2I	GAAGAC	2 cut(s)	205, 951
BstX2I	RGATCY	2 cut(s)	180, 840
BstXI	CCANNNNNNTGG	2 cut(s)	521, 895
BstYI	RGATCY	2 cut(s)	180, 840
BsuI	GTATCC	1 cut(s)	894
BsuRI	GGCC	3 cut(s)	408, 513, 960
BtsCI	GGATG	2 cut(s)	329, 727
BtsI	GCAGTG	1 cut(s)	141
BtsIMutI	CAGTG	3 cut(s)	141, 378, 402
BveI	ACCTGC	1 cut(s)	25
Cac8I	GCNNGC	2 cut(s)	442, 515
CaiI	CAGNNNCTG	1 cut(s)	500
CciI	TCATGA	1 cut(s)	448
Cfr10I	RCCGGY	1 cut(s)	440
Csp6I	GTAC	1 cut(s)	85
CspCI	CAANNNNNGTGG	2 cut(s)	117, 152
CviAII	CATG	5 cut(s)	162, 449, 739, 749, 901
CviQI	GTAC	1 cut(s)	85
DdeI	CTNAG	2 cut(s)	242, 465
DpnI	GATC	5 cut(s)	182, 477, 588, 776, 842
DpnII	GATC	5 cut(s)	180, 475, 586, 774, 840
DraI	TTTAAA	1 cut(s)	367
DrdI	GACNNNNNNGTC	1 cut(s)	750
DriI	GACNNNNNGTC	1 cut(s)	55
DseDI	GACNNNNNNGTC	1 cut(s)	750
EaeI	YGGCCR	1 cut(s)	511
Eam1104I	CTCTTC	2 cut(s)	324, 630
Eam1105I	GACNNNNNGTC	1 cut(s)	55
EarI	CTCTTC	2 cut(s)	324, 630
Eco147I	AGGCCT	1 cut(s)	960
Eco31I	GGTCTC	1 cut(s)	736
Eco57I	CTGAAG	1 cut(s)	696
EcoNI	CCTNNNNNAGG	1 cut(s)	468
EcoRI	GAATTC	1 cut(s)	195
EcoRII	CCWGG	1 cut(s)	229
FaeI	CATG	5 cut(s)	165, 452, 742, 752, 904
FaqI	GGGAC	1 cut(s)	1002
FatI	CATG	5 cut(s)	161, 448, 738, 748, 900
FauI	CCCGC	1 cut(s)	239
Fnu4HI	GCNGC	4 cut(s)	495, 498, 654, 978
FokI	GGATG	2 cut(s)	336, 734
Fsp4HI	GCNGC	4 cut(s)	495, 498, 654, 978
FspBI	CTAG	1 cut(s)	605
GluI	GCNGC	4 cut(s)	495, 498, 654, 978
GsuI	CTGGAG	1 cut(s)	957
HaeIII	GGCC	3 cut(s)	408, 513, 960
HapII	CCGG	2 cut(s)	422, 441
Hin1II	CATG	5 cut(s)	165, 452, 742, 752, 904
HinfI	GANTC	2 cut(s)	74, 272
HpaII	CCGG	2 cut(s)	422, 441
HphI	GGTGA	2 cut(s)	49, 311
Hpy188I	TCNGA	5 cut(s)	79, 185, 254, 840, 920
Hpy188III	TCNNGA	4 cut(s)	145, 449, 697, 941
HpyAV	CCTTC	8 cut(s)	40, 232, 290, 419, 574, 671, 845, 917
HpyCH4III	ACNGT	1 cut(s)	360
HpyCH4IV	ACGT	1 cut(s)	87
HpyCH4V	TGCA	2 cut(s)	494, 533
HpyF10VI	GCNNNNNNNGC	2 cut(s)	523, 977
HpyF3I	CTNAG	2 cut(s)	242, 465
HpySE526I	ACGT	1 cut(s)	87
Hsp92II	CATG	5 cut(s)	165, 452, 742, 752, 904
KroI	GCCGGC	1 cut(s)	440
KroNI	GCCGGC	1 cut(s)	442
Kzo9I	GATC	5 cut(s)	180, 475, 586, 774, 840
LguI	GCTCTTC	1 cut(s)	630
LmnI	GCTCC	2 cut(s)	209, 976
Lsp1109I	GCAGC	4 cut(s)	506, 509, 640, 989
LweI	GCATC	2 cut(s)	640, 712
MaeI	CTAG	1 cut(s)	605
MaeII	ACGT	1 cut(s)	87
MaeIII	GTNAC	3 cut(s)	88, 164, 299
MalI	GATC	5 cut(s)	182, 477, 588, 776, 842
MboI	GATC	5 cut(s)	180, 475, 586, 774, 840
MboII	GAAGA	5 cut(s)	205, 341, 647, 809, 956
MflI	RGATCY	2 cut(s)	180, 840
MhlI	GDGCHC	4 cut(s)	144, 282, 390, 973
MlsI	TGGCCA	1 cut(s)	513
MluCI	AATT	6 cut(s)	195, 287, 527, 625, 756, 889
MluNI	TGGCCA	1 cut(s)	513
MlyI	GAGTC	1 cut(s)	83
MmeI	TCCRAC	4 cut(s)	538, 547, 685, 991
MnlI	CCTC	7 cut(s)	10, 129, 161, 171, 610, 701, 756
Mox20I	TGGCCA	1 cut(s)	513
MroNI	GCCGGC	1 cut(s)	440
MscI	TGGCCA	1 cut(s)	513
MseI	TTAA	4 cut(s)	291, 366, 624, 735
MslI	CAYNNNNRTG	2 cut(s)	381, 383
Msp20I	TGGCCA	1 cut(s)	513
MspA1I	CMGCKG	1 cut(s)	500
MspI	CCGG	2 cut(s)	422, 441
MspR9I	CCNGG	2 cut(s)	231, 423
MvaI	CCWGG	1 cut(s)	231
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	2 cut(s)	523, 977
NaeI	GCCGGC	1 cut(s)	442
NciI	CCSGG	1 cut(s)	423
NdeII	GATC	5 cut(s)	180, 475, 586, 774, 840
NgoMIV	GCCGGC	1 cut(s)	440
NlaIII	CATG	5 cut(s)	165, 452, 742, 752, 904
NlaIV	GGNNCC	5 cut(s)	117, 182, 205, 281, 842
NmuCI	GTSAC	3 cut(s)	88, 164, 299
OliI	CACNNNNGTG	1 cut(s)	383
PagI	TCATGA	1 cut(s)	448
PaqCI	CACCTGC	1 cut(s)	25
PceI	AGGCCT	1 cut(s)	960
PciSI	GCTCTTC	1 cut(s)	630
PdiI	GCCGGC	1 cut(s)	442
PfeI	GAWTC	1 cut(s)	272
PflFI	GACNNNGTC	1 cut(s)	902
PkrI	GCNGC	4 cut(s)	496, 499, 655, 979
PleI	GAGTC	1 cut(s)	82
PpsI	GAGTC	1 cut(s)	82
Ppu21I	YACGTR	1 cut(s)	88
PsiI	TTATAA	1 cut(s)	630
Psp6I	CCWGG	1 cut(s)	229
PspGI	CCWGG	1 cut(s)	229
PspN4I	GGNNCC	5 cut(s)	117, 182, 205, 281, 842
PstI	CTGCAG	1 cut(s)	496
PstNI	CAGNNNCTG	1 cut(s)	500
PsuI	RGATCY	2 cut(s)	180, 840
PsyI	GACNNNGTC	1 cut(s)	902
PvuII	CAGCTG	1 cut(s)	500
RsaI	GTAC	1 cut(s)	86
RsaNI	GTAC	1 cut(s)	85
RseI	CAYNNNNRTG	2 cut(s)	381, 383
SapI	GCTCTTC	1 cut(s)	630
SaqAI	TTAA	4 cut(s)	291, 366, 624, 735
SatI	GCNGC	4 cut(s)	495, 498, 654, 978
Sau3AI	GATC	5 cut(s)	180, 475, 586, 774, 840
SchI	GAGTC	1 cut(s)	83
ScrFI	CCNGG	2 cut(s)	231, 423
SduI	GDGCHC	4 cut(s)	144, 282, 390, 973
SfaNI	GCATC	2 cut(s)	640, 712
SfcI	CTRYAG	1 cut(s)	492
SmiMI	CAYNNNNRTG	2 cut(s)	381, 383
SmlI	CTYRAG	5 cut(s)	110, 120, 143, 954, 962
SmoI	CTYRAG	5 cut(s)	110, 120, 143, 954, 962
Sse9I	AATT	6 cut(s)	195, 287, 527, 625, 756, 889
SseBI	AGGCCT	1 cut(s)	960
SsiI	CCGC	1 cut(s)	246
SspMI	CTAG	1 cut(s)	605
StuI	AGGCCT	1 cut(s)	960
StyD4I	CCNGG	2 cut(s)	229, 421
TaaI	ACNGT	1 cut(s)	360
TaiI	ACGT	1 cut(s)	90
TaqI	TCGA	3 cut(s)	585, 696, 867
TasI	AATT	6 cut(s)	195, 287, 527, 625, 756, 889
TfiI	GAWTC	1 cut(s)	272
Tru1I	TTAA	4 cut(s)	291, 366, 624, 735
Tru9I	TTAA	4 cut(s)	291, 366, 624, 735
TscAI	CASTG	3 cut(s)	141, 385, 409
TseFI	GTSAC	3 cut(s)	88, 164, 299
TseI	GCWGC	4 cut(s)	494, 497, 653, 977
Tsp45I	GTSAC	3 cut(s)	88, 164, 299
TspDTI	ATGAA	3 cut(s)	437, 465, 475
TspGWI	ACGGA	1 cut(s)	833
TspRI	CASTG	3 cut(s)	141, 385, 409
Tth111I	GACNNNGTC	1 cut(s)	902
XagI	CCTNNNNNAGG	1 cut(s)	468
XapI	RAATTY	3 cut(s)	195, 287, 756
XspI	CTAG	1 cut(s)	605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.