Rh2CG216100

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000431
Physical Location & Seq
Reverse (-)
21266244 .. 21266576
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG216100.1

Sequence Viewer

Length: 333 bp
ATGCTGGATGCAGTCCTTCTCAACATGAGACCTCATGGCCATATTTCCGTGTGTGGCATGATCTCACACTACAATCTCAATCAGCCACAAGGCTTTAGCAATCTCACCTCTCTCATCTACAATCGGATTCGTATGGAAGGCTTCGTTGTTTTCGATTACTTCCATCTCTATCCCAAGTTCTTGGACATGGTGTTGCCTTACATCAGAGAAGGAAAAATAGTGTATCTGGAAGATATAGTTGAAGGCCTCGAGCGTGGTCCGGCTACTCTTGTAGGGCTCTTTAGTGGTCGTAATGTCGGAAAACAAGTAGTTTTGGTTGCTCCAGCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

110

Amino Acids

12.45

Weight (kDa)

6.4

Isoelectric Point (pI)

27.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 37
AgsI TTSAA 1 cut(s) 242
AluBI AGCT 1 cut(s) 326
AluI AGCT 1 cut(s) 326
Alw26I GTCTC 1 cut(s) 22
Ama87I CYCGRG 1 cut(s) 248
AoxI GGCC 2 cut(s) 37, 244
AspS9I GGNCC 1 cut(s) 257
AsuHPI GGTGA 1 cut(s) 97
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 1 cut(s) 257
BalI TGGCCA 1 cut(s) 39
BanII GRGCYC 1 cut(s) 279
BccI CCATC 1 cut(s) 171
BcoDI GTCTC 1 cut(s) 22
Bme18I GGWCC 1 cut(s) 257
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 1 cut(s) 257
BpmI CTGGAG 1 cut(s) 306
BsaI GGTCTC 1 cut(s) 22
BseGI GGATG 1 cut(s) 13
BshFI GGCC 2 cut(s) 39, 246
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 1 cut(s) 260
BsmAI GTCTC 1 cut(s) 22
BsnI GGCC 2 cut(s) 39, 246
Bso31I GGTCTC 1 cut(s) 22
BsoBI CYCGRG 1 cut(s) 248
Bsp1286I GDGCHC 1 cut(s) 279
Bsp143I GATC 1 cut(s) 60
BspANI GGCC 2 cut(s) 39, 246
BspTNI GGTCTC 1 cut(s) 22
BssMI GATC 1 cut(s) 60
BstF5I GGATG 1 cut(s) 13
BstKTI GATC 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 22
BstMBI GATC 1 cut(s) 60
BstXI CCANNNNNNTGG 1 cut(s) 181
BsuRI GGCC 2 cut(s) 39, 246
BtsCI GGATG 1 cut(s) 13
Cfr13I GGNCC 1 cut(s) 257
CviAII CATG 4 cut(s) 25, 35, 58, 187
CviJI RGCY 8 cut(s) 39, 85, 93, 141, 246, 263, 277, 326
CviKI_1 RGCY 8 cut(s) 39, 85, 93, 141, 246, 263, 277, 326
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
EaeI YGGCCR 1 cut(s) 37
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 1 cut(s) 279
Eco31I GGTCTC 1 cut(s) 22
Eco47I GGWCC 1 cut(s) 257
Eco88I CYCGRG 1 cut(s) 248
EcoT38I GRGCYC 1 cut(s) 279
FaeI CATG 4 cut(s) 28, 38, 61, 190
FaiI YATR 7 cut(s) 26, 36, 42, 59, 134, 188, 236
FatI CATG 4 cut(s) 24, 34, 57, 186
FokI GGATG 1 cut(s) 20
FriOI GRGCYC 1 cut(s) 279
GsuI CTGGAG 1 cut(s) 306
HaeIII GGCC 2 cut(s) 39, 246
HapII CCGG 1 cut(s) 260
Hin1II CATG 4 cut(s) 28, 38, 61, 190
HinfI GANTC 1 cut(s) 127
HpaII CCGG 1 cut(s) 260
HphI GGTGA 1 cut(s) 97
Hpy188I TCNGA 3 cut(s) 126, 206, 299
Hpy188III TCNNGA 1 cut(s) 227
HpyAV CCTTC 4 cut(s) 26, 131, 203, 236
HpyCH4V TGCA 1 cut(s) 11
Hsp92II CATG 4 cut(s) 28, 38, 61, 190
Kzo9I GATC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 325
LpnPI CCDG 2 cut(s) 212, 273
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MboII GAAGA 1 cut(s) 242
MhlI GDGCHC 1 cut(s) 279
MlsI TGGCCA 1 cut(s) 39
MluNI TGGCCA 1 cut(s) 39
MmeI TCCRAC 1 cut(s) 277
MnlI CCTC 3 cut(s) 42, 118, 257
Mox20I TGGCCA 1 cut(s) 39
MscI TGGCCA 1 cut(s) 39
Msp20I TGGCCA 1 cut(s) 39
MspA1I CMGCKG 1 cut(s) 326
MspI CCGG 1 cut(s) 260
NdeII GATC 1 cut(s) 60
NlaIII CATG 4 cut(s) 28, 38, 61, 190
PaeR7I CTCGAG 1 cut(s) 248
PceI AGGCCT 1 cut(s) 246
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PfeI GAWTC 1 cut(s) 127
PspPI GGNCC 1 cut(s) 257
PspXI VCTCGAGB 1 cut(s) 248
PvuII CAGCTG 1 cut(s) 326
Sau3AI GATC 1 cut(s) 60
Sau96I GGNCC 1 cut(s) 257
SduI GDGCHC 1 cut(s) 279
SetI ASST 3 cut(s) 34, 110, 328
Sfr274I CTCGAG 1 cut(s) 248
SinI GGWCC 1 cut(s) 257
SlaI CTCGAG 1 cut(s) 248
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
SseBI AGGCCT 1 cut(s) 246
StuI AGGCCT 1 cut(s) 246
TaqI TCGA 2 cut(s) 153, 249
TfiI GAWTC 1 cut(s) 127
TspGWI ACGGA 1 cut(s) 37
VpaK11BI GGWCC 1 cut(s) 257
XhoI CTCGAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.