pycom15g13080

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0000431
Physical Location & Seq
Forward (+)
8964547 .. 8965796
1250 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g13080.2

Sequence Viewer

Length: 1044 bp
ATGGCACAAGTGATGAGCAACAAGCAGGTGCTTCTGAGGGACTTCGTTAATGGCCGGTCTCCGACGGAATCAGACATGTATGTCACAACTAATAGCATAAGTTTGAAGGTTCCTCCACAAGATTCAAACGCGGTTTTGGTGAAGAACCTCTACTTGTCCTGCGATCCCATGATGCGATTTCTTATCATGAAATCAGATCAGAGAATGAGTAAATACATTTATCCTTCTCCTGGCTCTCCAATTTGTGGATATGGCGTGGCTAAAGTTTTGGATTCAAGTCATCCAGAATTTAAAGAAGGTGACTTGGTATGGGGGCTAACCAAATGGGAAGAGTACAGCCTCCTCCCAAACCCTGAAAACCTCATCAAAATCCACCACACTGACGTACCCCTTTCCTACTATACTGGAATTCTCGGTATGGCCGGTAAGACTGCGTATGCGGGTTTCTTTGAAGTATGTCGACCTAAGAAAGGAGAGTACGTTTTTGTGTCCGCAGCATCTGGTGCAGTAGGTCAGCTTGTCGGACAATTTGCAAAATTGGCAGGTTGTTATGTCGTTGGAAGTGCTGGGAGTAAAGAAAAGGTTGATCTGCTGAAGAACAAGATAGGGTTCGATGAGGCTTTCAATTACAATGAGGAGCATGATTTAGACGCAGCTTTGAAAAGGTACTTTCCTCAAGGAATCGACGTCTACTTTGAGCATGTTGGCGGGAAACTGCTCGACGCCGTGCTGCTCAACATGAGAGAACACGGTCGCATGGCCATGTGCGGAATGATTTCGCAGTACAATCTTCCCGAGCCTCAGGGGATTAAAAACATGACGCAGATTATTTTGAAGCGGCTGCATATACACGGATTTACTCATCGGGATTACGATCACATTGTCCCCGAATACTATGAGTTTGTGCTGCCATACATCCGACAAGGGAAATTGGAGTATGTGGAAGACATAGTTGAAGGCCTCGAGAATGGTCCGGCAGCCTTTGTTGGACTTTTCAATGGTCGCAACGTTGGAAAACAAGTGGTTGCACTTGCTGGCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

348

Amino Acids

38.79

Weight (kDa)

6.42

Isoelectric Point (pI)

34.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 16
AasI GACNNNNNNGTC 1 cut(s) 80
AatII GACGTC 1 cut(s) 690
Acc36I ACCTGC 2 cut(s) 16, 533
AccB7I CCANNNNNTGG 1 cut(s) 245
AccI GTMKAC 2 cut(s) 460, 690
AccII CGCG 1 cut(s) 131
AciI CCGC 6 cut(s) 131, 440, 492, 708, 768, 838
AclI AACGTT 1 cut(s) 1008
AclWI GGATC 1 cut(s) 158
AcoI YGGCCR 4 cut(s) 52, 420, 759, 1036
AcsI RAATTY 2 cut(s) 287, 408
AcuI CTGAAG 1 cut(s) 614
AcyI GRCGYC 2 cut(s) 687, 723
AfaI GTAC 5 cut(s) 335, 387, 479, 668, 785
AfiI CCNNNNNNNGG 3 cut(s) 230, 245, 470
AflIII ACRYGT 1 cut(s) 75
AgsI TTSAA 9 cut(s) 106, 126, 276, 452, 625, 661, 835, 956, 997
AjnI CCWGG 1 cut(s) 229
AluBI AGCT 2 cut(s) 517, 656
AluI AGCT 2 cut(s) 517, 656
Alw26I GTCTC 1 cut(s) 63
AlwI GGATC 1 cut(s) 158
AlwNI CAGNNNCTG 1 cut(s) 500
Ama87I CYCGRG 2 cut(s) 794, 962
AoxI GGCC 5 cut(s) 52, 420, 759, 958, 1036
ApeKI GCWGC 6 cut(s) 494, 653, 730, 841, 907, 977
ApoI RAATTY 2 cut(s) 287, 408
ArsI GACNNNNNNTTYG 2 cut(s) 677, 709
Asp700I GAANNNNTTC 1 cut(s) 775
AspS9I GGNCC 1 cut(s) 971
AsuHPI GGTGA 2 cut(s) 151, 311
AvaI CYCGRG 2 cut(s) 794, 962
AvaII GGWCC 1 cut(s) 971
AxyI CCTNAGG 1 cut(s) 801
BaeI ACNNNNGTAYC 2 cut(s) 369, 402
BalI TGGCCA 2 cut(s) 761, 1038
BarI GAAGNNNNNNTAC 2 cut(s) 134, 166
BbsI GAAGAC 1 cut(s) 951
BbvI GCAGC 6 cut(s) 506, 665, 717, 828, 894, 989
BceAI ACGGC 1 cut(s) 710
BciT130I CCWGG 1 cut(s) 231
BcoDI GTCTC 1 cut(s) 63
BfuAI ACCTGC 2 cut(s) 16, 533
BisI GCNGC 7 cut(s) 495, 654, 731, 839, 842, 908, 978
BlsI GCNGC 7 cut(s) 496, 655, 732, 840, 843, 909, 979
Bme1390I CCNGG 1 cut(s) 231
Bme18I GGWCC 1 cut(s) 971
BmeT110I CYCGRG 2 cut(s) 794, 962
BmgT120I GGNCC 1 cut(s) 971
BmiI GGNNCC 1 cut(s) 111
BmrFI CCNGG 1 cut(s) 231
BmsI GCATC 2 cut(s) 162, 506
BpiI GAAGAC 1 cut(s) 951
BpuEI CTTGAG 1 cut(s) 660
BsaBI GATNNNNATC 1 cut(s) 873
BsaHI GRCGYC 2 cut(s) 687, 723
BsaI GGTCTC 1 cut(s) 63
BsaXI ACNNNNNCTCC 2 cut(s) 465, 495
Bsc4I CCNNNNNNNGG 3 cut(s) 230, 245, 470
Bse118I RCCGGY 2 cut(s) 54, 422
Bse1I ACTGG 1 cut(s) 409
Bse21I CCTNAGG 1 cut(s) 801
Bse8I GATNNNNATC 1 cut(s) 873
BseBI CCWGG 1 cut(s) 231
BseGI GGATG 2 cut(s) 280, 915
BseJI GATNNNNATC 1 cut(s) 873
BseLI CCNNNNNNNGG 3 cut(s) 230, 245, 470
BseMII CTCAG 2 cut(s) 26, 815
BseNI ACTGG 1 cut(s) 409
BseRI GAGGAG 2 cut(s) 332, 650
BseXI GCAGC 6 cut(s) 506, 665, 717, 828, 894, 989
BseYI CCCAGC 1 cut(s) 566
BsgI GTGCAG 1 cut(s) 525
Bsh1236I CGCG 1 cut(s) 131
Bsh1285I CGRYCG 1 cut(s) 754
BshFI GGCC 5 cut(s) 54, 422, 761, 960, 1038
BsiEI CGRYCG 1 cut(s) 754
BsiHKCI CYCGRG 2 cut(s) 794, 962
BsiSI CCGG 3 cut(s) 55, 423, 974
BslFI GGGAC 2 cut(s) 53, 869
BslI CCNNNNNNNGG 3 cut(s) 230, 245, 470
BsmAI GTCTC 1 cut(s) 63
BsmFI GGGAC 2 cut(s) 53, 869
BsnI GGCC 5 cut(s) 54, 422, 761, 960, 1038
Bso31I GGTCTC 1 cut(s) 63
BsoBI CYCGRG 2 cut(s) 794, 962
Bsp143I GATC 4 cut(s) 163, 196, 586, 874
BspACI CCGC 6 cut(s) 131, 440, 492, 708, 768, 838
BspANI GGCC 5 cut(s) 54, 422, 761, 960, 1038
BspCNI CTCAG 2 cut(s) 27, 814
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 1 cut(s) 111
BspMI ACCTGC 2 cut(s) 16, 533
BspPI GGATC 1 cut(s) 158
BspTNI GGTCTC 1 cut(s) 63
BsrFI RCCGGY 2 cut(s) 54, 422
BsrI ACTGG 1 cut(s) 409
BssAI RCCGGY 2 cut(s) 54, 422
BssMI GATC 4 cut(s) 163, 196, 586, 874
BssNI GRCGYC 2 cut(s) 687, 723
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 1 cut(s) 752
Bst6I CTCTTC 1 cut(s) 324
BstACI GRCGYC 2 cut(s) 687, 723
BstAPI GCANNNNNTGC 1 cut(s) 503
BstC8I GCNNGC 1 cut(s) 1036
BstDEI CTNAG 3 cut(s) 35, 465, 801
BstENI CCTNNNNNAGG 1 cut(s) 468
BstF5I GGATG 2 cut(s) 280, 915
BstFNI CGCG 1 cut(s) 131
BstKTI GATC 4 cut(s) 166, 199, 589, 877
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 4 cut(s) 163, 196, 586, 874
BstMCI CGRYCG 1 cut(s) 754
BstMWI GCNNNNNNNGC 2 cut(s) 503, 539
BstNI CCWGG 1 cut(s) 231
BstNSI RCATGY 2 cut(s) 79, 704
BstSCI CCNGG 1 cut(s) 229
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 6 cut(s) 506, 665, 717, 828, 894, 989
BstV2I GAAGAC 1 cut(s) 951
Bsu36I CCTNAGG 1 cut(s) 801
BsuRI GGCC 5 cut(s) 54, 422, 761, 960, 1038
BtsCI GGATG 2 cut(s) 280, 915
BtsIMutI CAGTG 2 cut(s) 378, 1039
BveI ACCTGC 2 cut(s) 16, 533
Cac8I GCNNGC 1 cut(s) 1036
CaiI CAGNNNCTG 1 cut(s) 500
CciI TCATGA 1 cut(s) 186
Cfr10I RCCGGY 2 cut(s) 54, 422
Cfr13I GGNCC 1 cut(s) 971
CseI GACGC 3 cut(s) 659, 731, 829
Csp6I GTAC 5 cut(s) 334, 386, 478, 667, 784
CviAII CATG 9 cut(s) 76, 169, 187, 641, 701, 739, 757, 763, 817
CviQI GTAC 5 cut(s) 334, 386, 478, 667, 784
DdeI CTNAG 3 cut(s) 35, 465, 801
DpnI GATC 4 cut(s) 165, 198, 588, 876
DpnII GATC 4 cut(s) 163, 196, 586, 874
DraI TTTAAA 1 cut(s) 292
DrdI GACNNNNNNGTC 1 cut(s) 80
DseDI GACNNNNNNGTC 1 cut(s) 80
EaeI YGGCCR 4 cut(s) 52, 420, 759, 1036
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
Eco147I AGGCCT 1 cut(s) 960
Eco31I GGTCTC 1 cut(s) 63
Eco47I GGWCC 1 cut(s) 971
Eco57I CTGAAG 1 cut(s) 614
Eco81I CCTNAGG 1 cut(s) 801
Eco88I CYCGRG 2 cut(s) 794, 962
EcoNI CCTNNNNNAGG 1 cut(s) 468
EcoRI GAATTC 1 cut(s) 408
EcoRII CCWGG 1 cut(s) 229
FaeI CATG 9 cut(s) 79, 172, 190, 644, 704, 742, 760, 766, 820
FaqI GGGAC 2 cut(s) 53, 869
FatI CATG 9 cut(s) 75, 168, 186, 640, 700, 738, 756, 762, 816
FauI CCCGC 2 cut(s) 433, 701
FblI GTMKAC 2 cut(s) 460, 690
Fnu4HI GCNGC 7 cut(s) 495, 654, 731, 839, 842, 908, 978
FokI GGATG 2 cut(s) 267, 902
Fsp4HI GCNGC 7 cut(s) 495, 654, 731, 839, 842, 908, 978
GluI GCNGC 7 cut(s) 495, 654, 731, 839, 842, 908, 978
GsaI CCCAGC 1 cut(s) 570
HaeIII GGCC 5 cut(s) 54, 422, 761, 960, 1038
HapII CCGG 3 cut(s) 55, 423, 974
HgaI GACGC 3 cut(s) 659, 731, 829
Hin1I GRCGYC 2 cut(s) 687, 723
Hin1II CATG 9 cut(s) 79, 172, 190, 644, 704, 742, 760, 766, 820
HincII GTYRAC 1 cut(s) 461
HindII GTYRAC 1 cut(s) 461
HinfI GANTC 4 cut(s) 68, 122, 272, 681
HpaII CCGG 3 cut(s) 55, 423, 974
HphI GGTGA 2 cut(s) 151, 311
Hpy166II GTNNAC 2 cut(s) 461, 691
Hpy188I TCNGA 7 cut(s) 36, 63, 73, 196, 201, 524, 920
Hpy188III TCNNGA 5 cut(s) 187, 284, 794, 866, 964
Hpy8I GTNNAC 2 cut(s) 461, 691
Hpy99I CGWCG 3 cut(s) 67, 689, 725
HpyAV CCTTC 4 cut(s) 100, 234, 290, 950
HpyCH4III ACNGT 1 cut(s) 752
HpyCH4IV ACGT 4 cut(s) 384, 480, 687, 1008
HpyCH4V TGCA 4 cut(s) 506, 533, 844, 1028
HpyF10VI GCNNNNNNNGC 2 cut(s) 503, 539
HpyF3I CTNAG 3 cut(s) 35, 465, 801
HpySE526I ACGT 4 cut(s) 384, 480, 687, 1008
Hsp92I GRCGYC 2 cut(s) 687, 723
Hsp92II CATG 9 cut(s) 79, 172, 190, 644, 704, 742, 760, 766, 820
Kzo9I GATC 4 cut(s) 163, 196, 586, 874
LmnI GCTCC 1 cut(s) 637
Lsp1109I GCAGC 6 cut(s) 506, 665, 717, 828, 894, 989
LweI GCATC 2 cut(s) 162, 506
MaeII ACGT 4 cut(s) 384, 480, 687, 1008
MaeIII GTNAC 2 cut(s) 82, 299
MalI GATC 4 cut(s) 165, 198, 588, 876
MboI GATC 4 cut(s) 163, 196, 586, 874
MboII GAAGA 5 cut(s) 154, 341, 607, 782, 956
MlsI TGGCCA 2 cut(s) 761, 1038
MluCI AATT 7 cut(s) 240, 287, 408, 527, 536, 625, 929
MluNI TGGCCA 2 cut(s) 761, 1038
MmeI TCCRAC 6 cut(s) 86, 502, 538, 943, 967, 991
Mox20I TGGCCA 2 cut(s) 761, 1038
MroXI GAANNNNTTC 1 cut(s) 775
MscI TGGCCA 2 cut(s) 761, 1038
MseI TTAA 3 cut(s) 48, 291, 810
MslI CAYNNNNRTG 1 cut(s) 761
Msp20I TGGCCA 2 cut(s) 761, 1038
MspI CCGG 3 cut(s) 55, 423, 974
MspR9I CCNGG 1 cut(s) 231
MvaI CCWGG 1 cut(s) 231
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 2 cut(s) 503, 539
NdeII GATC 4 cut(s) 163, 196, 586, 874
NlaIII CATG 9 cut(s) 79, 172, 190, 644, 704, 742, 760, 766, 820
NlaIV GGNNCC 1 cut(s) 111
NmuCI GTSAC 2 cut(s) 82, 299
NspI RCATGY 2 cut(s) 79, 704
PaeR7I CTCGAG 1 cut(s) 962
PagI TCATGA 1 cut(s) 186
PaqCI CACCTGC 1 cut(s) 16
PceI AGGCCT 1 cut(s) 960
PciI ACATGT 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 775
PfeI GAWTC 4 cut(s) 68, 122, 272, 681
PflMI CCANNNNNTGG 1 cut(s) 245
PkrI GCNGC 7 cut(s) 496, 655, 732, 840, 843, 909, 979
PscI ACATGT 1 cut(s) 75
Psp1406I AACGTT 1 cut(s) 1008
Psp6I CCWGG 1 cut(s) 229
PspFI CCCAGC 1 cut(s) 566
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 1 cut(s) 111
PspPI GGNCC 1 cut(s) 971
PstNI CAGNNNCTG 1 cut(s) 500
RsaI GTAC 5 cut(s) 335, 387, 479, 668, 785
RsaNI GTAC 5 cut(s) 334, 386, 478, 667, 784
RseI CAYNNNNRTG 1 cut(s) 761
SalI GTCGAC 1 cut(s) 459
SaqAI TTAA 3 cut(s) 48, 291, 810
SatI GCNGC 7 cut(s) 495, 654, 731, 839, 842, 908, 978
Sau3AI GATC 4 cut(s) 163, 196, 586, 874
Sau96I GGNCC 1 cut(s) 971
ScrFI CCNGG 1 cut(s) 231
SfaNI GCATC 2 cut(s) 162, 506
Sfr274I CTCGAG 1 cut(s) 962
SinI GGWCC 1 cut(s) 971
SlaI CTCGAG 1 cut(s) 962
SmiMI CAYNNNNRTG 1 cut(s) 761
SmlI CTYRAG 2 cut(s) 675, 962
SmoI CTYRAG 2 cut(s) 675, 962
Sse9I AATT 7 cut(s) 240, 287, 408, 527, 536, 625, 929
SseBI AGGCCT 1 cut(s) 960
SsiI CCGC 6 cut(s) 131, 440, 492, 708, 768, 838
StuI AGGCCT 1 cut(s) 960
StyD4I CCNGG 1 cut(s) 229
TaaI ACNGT 1 cut(s) 752
TaiI ACGT 4 cut(s) 387, 483, 690, 1011
TaqI TCGA 5 cut(s) 460, 612, 684, 720, 963
TasI AATT 7 cut(s) 240, 287, 408, 527, 536, 625, 929
TatI WGTACW 2 cut(s) 333, 783
TauI GCSGC 1 cut(s) 841
TfiI GAWTC 4 cut(s) 68, 122, 272, 681
Tru1I TTAA 3 cut(s) 48, 291, 810
Tru9I TTAA 3 cut(s) 48, 291, 810
TscAI CASTG 1 cut(s) 385
TseFI GTSAC 2 cut(s) 82, 299
TseI GCWGC 6 cut(s) 494, 653, 730, 841, 907, 977
Tsp45I GTSAC 2 cut(s) 82, 299
TspDTI ATGAA 1 cut(s) 203
TspGWI ACGGA 2 cut(s) 80, 867
TspRI CASTG 1 cut(s) 385
Van91I CCANNNNNTGG 1 cut(s) 245
VpaK11BI GGWCC 1 cut(s) 971
XagI CCTNNNNNAGG 1 cut(s) 468
XapI RAATTY 2 cut(s) 287, 408
XceI RCATGY 2 cut(s) 79, 704
XhoI CTCGAG 1 cut(s) 962
XmiI GTMKAC 2 cut(s) 460, 690
XmnI GAANNNNTTC 1 cut(s) 775
ZraI GACGTC 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.