pycom11g16640

2-alkenal reductase (NADP( )-dependent)-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000431
Physical Location & Seq
Forward (+)
18357066 .. 18359746
2681 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g16640.5

Sequence Viewer

Length: 1053 bp
ATGGCAGAAGTGAGTAACAAGCAGGTGATACTGAGGGATTATGTAGTCAAGGCCTTTCCCAAAGAGTCAGACTTGTGTGTGATCAACACCGCTACTATCAAGTTGAAGCTTCCCGCAGAGACTGATCAGCCAGCTGATGCGGTTACTTCCTCAAAGGAACAACTAGTCCTACTTAAGAACCTCTACTTGTCTTGCGATCCCTACCAACGACTCCGTATGGAAAGCGTCCATGGGCACGGCGTCCCACCAACGTCCTCCTATACACCTGGCTCTACGATACACGGATATGGAGTGGCTCAAGTTTTGGACTCTAGGCACCCAGATTTTAAGGCAGGAGACTTAGTTTGGGGGACGACCAATTGGGAAGAGTACAGTCTAATCACTACACCCCAAGTCCTCTTCAAAATCCACCACACCGATATACCCCTATCCTATTATACTGGAATTTTAGGTATGCCTGGTATGACCGCTTATGTTGGTTTCTACGAAATATGTTCTCCTAAGAAAGGAGAATACGTCTTCATTTCAGCAGCAGCTGGTGCTGTTGGTCAGCTTGTTGGACAACTTGCAAAATTGATGGGTTGTTATGTTGTTGGAAGTGCTGGTAGTAACGAAAAGGTCGATCTTTTGAAGAATAAGTTTGGATTTGACGAGGCTTTTAACTACAAAGAAGAAAATGACTTGAATGTGGCTTTGAAAAGATATTTCCGGGAAGGCATTGATATATACTTTGAAAATGTTGGGGGTAAAACGCTGGATGCTGTGCTCCTTAACATGAGACTCCATGGGCGCATTTCTGGATGTGGAATGATTTCACAGTACAATCTTGACAAGCCTGAAGGGGTAACTAATTTGATGCAGCTCATATACAAGCGCATTCGTTTCCAAGGATTTTCAGTTTCTGAACACTATCACCTCTATCCTAAATTCCTTGAGTTTATGTTGCCTTACATTAGACAAGGGAAGATTGTTTATGTGGAAGACATAGTTGAAGGCCTTGAGAATGGTCCAGCAGCGCTTGTTGGACTTTTTAAGGGTCGTAACTTTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ADH_N_2 ADH_zinc_N

Protein Analysis

351

Amino Acids

39.04

Weight (kDa)

6.51

Isoelectric Point (pI)

22.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
Acc36I ACCTGC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 315
AciI CCGC 4 cut(s) 90, 114, 140, 468
AclWI GGATC 1 cut(s) 191
AcsI RAATTY 2 cut(s) 444, 926
AcuI CTGAAG 1 cut(s) 858
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 2 cut(s) 371, 821
AfeI AGCGCT 1 cut(s) 1017
AfiI CCNNNNNNNGG 1 cut(s) 506
AflII CTTAAG 1 cut(s) 173
AgsI TTSAA 7 cut(s) 106, 403, 631, 685, 697, 734, 992
AhlI ACTAGT 1 cut(s) 163
AjnI CCWGG 2 cut(s) 265, 457
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
AluBI AGCT 5 cut(s) 109, 134, 536, 553, 862
AluI AGCT 5 cut(s) 109, 134, 536, 553, 862
Alw21I GWGCWC 1 cut(s) 768
Alw26I GTCTC 3 cut(s) 113, 330, 772
AlwI GGATC 1 cut(s) 191
AlwNI CAGNNNCTG 3 cut(s) 122, 536, 902
Aor51HI AGCGCT 1 cut(s) 1017
AoxI GGCC 2 cut(s) 51, 994
ApeKI GCWGC 4 cut(s) 530, 533, 859, 1013
ApoI RAATTY 2 cut(s) 444, 926
Asp700I GAANNNNTTC 1 cut(s) 811
AspLEI GCGC 3 cut(s) 792, 876, 1018
AspS9I GGNCC 1 cut(s) 1007
AsuC2I CCSGG 1 cut(s) 710
AsuHPI GGTGA 2 cut(s) 37, 905
AvaII GGWCC 1 cut(s) 1007
BaeGI GKGCMC 1 cut(s) 237
BanI GGYRCC 1 cut(s) 315
BbsI GAAGAC 2 cut(s) 511, 987
Bbv12I GWGCWC 1 cut(s) 768
BbvI GCAGC 4 cut(s) 542, 545, 871, 1025
BccI CCATC 1 cut(s) 571
BceAI ACGGC 1 cut(s) 253
BciT130I CCWGG 2 cut(s) 267, 459
BclI TGATCA 2 cut(s) 81, 124
BcnI CCSGG 1 cut(s) 710
BcoDI GTCTC 3 cut(s) 113, 330, 772
BcuI ACTAGT 1 cut(s) 163
BfaI CTAG 2 cut(s) 164, 312
BfoI RGCGCY 1 cut(s) 1019
BfrI CTTAAG 1 cut(s) 173
BfuAI ACCTGC 1 cut(s) 13
BisI GCNGC 4 cut(s) 531, 534, 860, 1014
BlsI GCNGC 4 cut(s) 532, 535, 861, 1015
Bme1390I CCNGG 3 cut(s) 267, 459, 710
Bme18I GGWCC 1 cut(s) 1007
BmgT120I GGNCC 1 cut(s) 1007
BmiI GGNNCC 1 cut(s) 317
BmrFI CCNGG 3 cut(s) 267, 459, 710
BmsI GCATC 3 cut(s) 127, 748, 846
BpiI GAAGAC 2 cut(s) 511, 987
BpuEI CTTGAG 3 cut(s) 282, 953, 1019
BpuMI CCSGG 1 cut(s) 710
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 3 cut(s) 229, 784, 886
BsaXI ACNNNNNCTCC 4 cut(s) 327, 357, 501, 531
Bsc4I CCNNNNNNNGG 1 cut(s) 506
Bse1I ACTGG 1 cut(s) 445
BseBI CCWGG 2 cut(s) 267, 459
BseDI CCNNGG 3 cut(s) 229, 784, 886
BseGI GGATG 2 cut(s) 763, 806
BseLI CCNNNNNNNGG 1 cut(s) 506
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 1 cut(s) 445
BseSI GKGCMC 1 cut(s) 237
BseXI GCAGC 4 cut(s) 542, 545, 871, 1025
BshFI GGCC 2 cut(s) 53, 996
BshNI GGYRCC 1 cut(s) 315
BsiHKAI GWGCWC 1 cut(s) 768
BsiSI CCGG 1 cut(s) 709
BslFI GGGAC 2 cut(s) 227, 364
BslI CCNNNNNNNGG 1 cut(s) 506
BsmAI GTCTC 3 cut(s) 113, 330, 772
BsmFI GGGAC 2 cut(s) 227, 364
BsmI GAATGC 1 cut(s) 876
BsnI GGCC 2 cut(s) 53, 996
Bsp1286I GDGCHC 2 cut(s) 237, 768
Bsp143I GATC 4 cut(s) 81, 124, 196, 622
Bsp19I CCATGG 2 cut(s) 229, 784
BspACI CCGC 4 cut(s) 90, 114, 140, 468
BspANI GGCC 2 cut(s) 53, 996
BspCNI CTCAG 1 cut(s) 24
BspLI GGNNCC 1 cut(s) 317
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 191
BspT107I GGYRCC 1 cut(s) 315
BspTI CTTAAG 1 cut(s) 173
BsrI ACTGG 1 cut(s) 445
BssECI CCNNGG 3 cut(s) 229, 784, 886
BssMI GATC 4 cut(s) 81, 124, 196, 622
BssNI GRCGYC 1 cut(s) 240
BssT1I CCWWGG 3 cut(s) 229, 784, 886
Bst2UI CCWGG 2 cut(s) 267, 459
Bst4CI ACNGT 2 cut(s) 374, 819
Bst6I CTCTTC 2 cut(s) 360, 404
BstACI GRCGYC 1 cut(s) 240
BstAFI CTTAAG 1 cut(s) 173
BstAPI GCANNNNNTGC 1 cut(s) 539
BstC8I GCNNGC 1 cut(s) 132
BstDEI CTNAG 3 cut(s) 32, 340, 501
BstDSI CCRYGG 2 cut(s) 229, 784
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 2 cut(s) 763, 806
BstH2I RGCGCY 1 cut(s) 1019
BstHHI GCGC 3 cut(s) 792, 876, 1018
BstKTI GATC 4 cut(s) 84, 127, 199, 625
BstMAI GTCTC 3 cut(s) 113, 330, 772
BstMBI GATC 4 cut(s) 81, 124, 196, 622
BstMWI GCNNNNNNNGC 1 cut(s) 539
BstNI CCWGG 2 cut(s) 267, 459
BstSCI CCNGG 3 cut(s) 265, 457, 708
BstSLI GKGCMC 1 cut(s) 237
BstV1I GCAGC 4 cut(s) 542, 545, 871, 1025
BstV2I GAAGAC 2 cut(s) 511, 987
BsuRI GGCC 2 cut(s) 53, 996
BtgI CCRYGG 2 cut(s) 229, 784
BtsCI GGATG 2 cut(s) 763, 806
BveI ACCTGC 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 132
CaiI CAGNNNCTG 3 cut(s) 122, 536, 902
CfoI GCGC 3 cut(s) 792, 876, 1018
Cfr13I GGNCC 1 cut(s) 1007
CseI GACGC 2 cut(s) 214, 229
Csp6I GTAC 2 cut(s) 370, 820
CviAII CATG 3 cut(s) 230, 775, 785
CviQI GTAC 2 cut(s) 370, 820
DdeI CTNAG 3 cut(s) 32, 340, 501
DpnI GATC 4 cut(s) 83, 126, 198, 624
DpnII GATC 4 cut(s) 81, 124, 196, 622
Eam1104I CTCTTC 2 cut(s) 360, 404
EarI CTCTTC 2 cut(s) 360, 404
Eco130I CCWWGG 3 cut(s) 229, 784, 886
Eco147I AGGCCT 2 cut(s) 53, 996
Eco47I GGWCC 1 cut(s) 1007
Eco47III AGCGCT 1 cut(s) 1017
Eco57I CTGAAG 1 cut(s) 858
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoRII CCWGG 2 cut(s) 265, 457
EcoT14I CCWWGG 3 cut(s) 229, 784, 886
ErhI CCWWGG 3 cut(s) 229, 784, 886
FaeI CATG 3 cut(s) 233, 778, 788
FaqI GGGAC 2 cut(s) 227, 364
FatI CATG 3 cut(s) 229, 774, 784
FauI CCCGC 1 cut(s) 121
FbaI TGATCA 2 cut(s) 81, 124
Fnu4HI GCNGC 4 cut(s) 531, 534, 860, 1014
FokI GGATG 2 cut(s) 770, 813
Fsp4HI GCNGC 4 cut(s) 531, 534, 860, 1014
FspBI CTAG 2 cut(s) 164, 312
GlaI GCGC 3 cut(s) 791, 875, 1017
GluI GCNGC 4 cut(s) 531, 534, 860, 1014
HaeII RGCGCY 1 cut(s) 1019
HaeIII GGCC 2 cut(s) 53, 996
HapII CCGG 1 cut(s) 709
HgaI GACGC 2 cut(s) 214, 229
HhaI GCGC 3 cut(s) 792, 876, 1018
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 3 cut(s) 233, 778, 788
Hin6I GCGC 3 cut(s) 790, 874, 1016
HinP1I GCGC 3 cut(s) 790, 874, 1016
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 4 cut(s) 65, 210, 308, 780
HpaII CCGG 1 cut(s) 709
HphI GGTGA 2 cut(s) 37, 905
Hpy188I TCNGA 2 cut(s) 70, 904
Hpy188III TCNNGA 2 cut(s) 798, 827
HpyAV CCTTC 3 cut(s) 707, 833, 986
HpyCH4III ACNGT 2 cut(s) 374, 819
HpyCH4IV ACGT 2 cut(s) 251, 516
HpyCH4V TGCA 2 cut(s) 569, 859
HpyF10VI GCNNNNNNNGC 1 cut(s) 539
HpyF3I CTNAG 3 cut(s) 32, 340, 501
HpySE526I ACGT 2 cut(s) 251, 516
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 3 cut(s) 233, 778, 788
HspAI GCGC 3 cut(s) 790, 874, 1016
Ksp22I TGATCA 2 cut(s) 81, 124
Kzo9I GATC 4 cut(s) 81, 124, 196, 622
LmnI GCTCC 1 cut(s) 771
Lsp1109I GCAGC 4 cut(s) 542, 545, 871, 1025
LweI GCATC 3 cut(s) 127, 748, 846
MaeI CTAG 2 cut(s) 164, 312
MaeII ACGT 2 cut(s) 251, 516
MaeIII GTNAC 5 cut(s) 14, 142, 608, 844, 1040
MalI GATC 4 cut(s) 83, 126, 198, 624
MboI GATC 4 cut(s) 81, 124, 196, 622
MboII GAAGA 7 cut(s) 377, 391, 511, 643, 683, 976, 992
MfeI CAATTG 1 cut(s) 358
MhlI GDGCHC 2 cut(s) 237, 768
MluCI AATT 5 cut(s) 358, 444, 572, 850, 926
MlyI GAGTC 4 cut(s) 74, 204, 302, 774
MmeI TCCRAC 3 cut(s) 538, 574, 1003
MnlI CCTC 7 cut(s) 27, 160, 191, 265, 407, 646, 926
MroXI GAANNNNTTC 1 cut(s) 811
MseI TTAA 6 cut(s) 174, 327, 660, 771, 1032, 1051
MslI CAYNNNNRTG 1 cut(s) 285
MspA1I CMGCKG 2 cut(s) 134, 536
MspCI CTTAAG 1 cut(s) 173
MspI CCGG 1 cut(s) 709
MspR9I CCNGG 3 cut(s) 267, 459, 710
MunI CAATTG 1 cut(s) 358
Mva1269I GAATGC 1 cut(s) 876
MvaI CCWGG 2 cut(s) 267, 459
MwoI GCNNNNNNNGC 1 cut(s) 539
NciI CCSGG 1 cut(s) 710
NcoI CCATGG 2 cut(s) 229, 784
NdeII GATC 4 cut(s) 81, 124, 196, 622
NlaIII CATG 3 cut(s) 233, 778, 788
NlaIV GGNNCC 1 cut(s) 317
PaqCI CACCTGC 1 cut(s) 13
PceI AGGCCT 2 cut(s) 53, 996
PcsI WCGNNNNNNNCGW 1 cut(s) 618
PctI GAATGC 1 cut(s) 876
PdmI GAANNNNTTC 1 cut(s) 811
PfoI TCCNGGA 1 cut(s) 708
PkrI GCNGC 4 cut(s) 532, 535, 861, 1015
PleI GAGTC 4 cut(s) 73, 204, 302, 774
PpsI GAGTC 4 cut(s) 73, 204, 302, 774
Psp6I CCWGG 2 cut(s) 265, 457
PspGI CCWGG 2 cut(s) 265, 457
PspN4I GGNNCC 1 cut(s) 317
PspPI GGNCC 1 cut(s) 1007
PstNI CAGNNNCTG 3 cut(s) 122, 536, 902
PvuII CAGCTG 2 cut(s) 134, 536
RsaI GTAC 2 cut(s) 371, 821
RsaNI GTAC 2 cut(s) 370, 820
RseI CAYNNNNRTG 1 cut(s) 285
SaqAI TTAA 6 cut(s) 174, 327, 660, 771, 1032, 1051
SatI GCNGC 4 cut(s) 531, 534, 860, 1014
Sau3AI GATC 4 cut(s) 81, 124, 196, 622
Sau96I GGNCC 1 cut(s) 1007
SchI GAGTC 4 cut(s) 74, 204, 302, 774
ScrFI CCNGG 3 cut(s) 267, 459, 710
SduI GDGCHC 2 cut(s) 237, 768
SfaNI GCATC 3 cut(s) 127, 748, 846
SinI GGWCC 1 cut(s) 1007
SmiMI CAYNNNNRTG 1 cut(s) 285
SmlI CTYRAG 4 cut(s) 173, 297, 932, 998
SmoI CTYRAG 4 cut(s) 173, 297, 932, 998
SpeI ACTAGT 1 cut(s) 163
Sse9I AATT 5 cut(s) 358, 444, 572, 850, 926
SseBI AGGCCT 2 cut(s) 53, 996
SsiI CCGC 4 cut(s) 90, 114, 140, 468
SspMI CTAG 2 cut(s) 164, 312
StuI AGGCCT 2 cut(s) 53, 996
StyD4I CCNGG 3 cut(s) 265, 457, 708
StyI CCWWGG 3 cut(s) 229, 784, 886
TaaI ACNGT 2 cut(s) 374, 819
TaiI ACGT 2 cut(s) 254, 519
TaqI TCGA 1 cut(s) 621
TasI AATT 5 cut(s) 358, 444, 572, 850, 926
TatI WGTACW 2 cut(s) 369, 819
Tru1I TTAA 6 cut(s) 174, 327, 660, 771, 1032, 1051
Tru9I TTAA 6 cut(s) 174, 327, 660, 771, 1032, 1051
TseI GCWGC 4 cut(s) 530, 533, 859, 1013
TspDTI ATGAA 1 cut(s) 511
TspGWI ACGGA 2 cut(s) 203, 297
Vha464I CTTAAG 1 cut(s) 173
VpaK11BI GGWCC 1 cut(s) 1007
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 2 cut(s) 444, 926
XmnI GAANNNNTTC 1 cut(s) 811
XspI CTAG 2 cut(s) 164, 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.