RLG00000018376

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
28936339 .. 28937993
1655 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018376

Sequence Viewer

Length: 1080 bp
ATGACGTTAGTGAGAAACAAACAGGTGATATTGAGGAACTATGTCACCACTTATCCGAAAGATTCGGACTTGTATGTGACCAGCGCTACTGCTAGTGTCAAGTTCAAGCTTCCTGCTCACACTATCATTACCACTTCAAAGGAACCAGCCGTCATAGTGAAGAACCTCTACTTGTCTTGCGATCCCTACCAGCGGCTCTTTATGGAAGAAATCCCAGGAGTCGACGAATCTACGTATAGTCAGCGAGTCTACTATACACCCGGCTCGCCAATATATGGGTATGGAGTGGCTGAAGTGTTGGACTCACACCACCCAGATTTTAAGGCAGGTGACTTTGTTTGGGGGACTACTAATTGGGAGCAATACAGCCTTATCACTACACCCAAAAGCCTCATCAAAATCCAGCACACTGATACTGATGTGCCCCTTTCCTACTATGCTGGAATTCTTGGTACAACTGGTTTGACCGCTTACGTTGGTTTCTATGAATTCTGTTCTCCGAAGAAAGGAGAAAATGTGTTTGTTTCAGCAGCAGCTGGTGCTGTTGGTCAGCTTGTTGGCCAAATTGCTAAACTAATGGGTTGTTATGTTGTTGGAAGTGCTGGTACTAAGCAAAAGATTGATCTATTGAAGAGCAAGTTTGGATTTGATGACGCTTTTAACTATAAGGAAGAGAGTGACTTGGATGTGGCTTTGAAAAGGTATTTTCCTGGAGGCATTGATATATACTTTGACAATGTTGGCGGCAAAATGCTGGATGCGGTCTTCCTCAACATGAGTGTCCATGGCCGAATTGCTGGTTGTGGAATGATTTCACAGTACAATCTTGATCAGCCAGAAGGGGTGACCAATTTGATGCACCTTGTGTACAAGCGTATACGCTTCCATGGATTTACCGTTCGTGATCACTATCATCTGCATCCCAAATTCTTAGACTTCATTCTGCCTTACATTCAACAAGGGAAGATCGCTTATATAGAAGACATCGTTGAAGGCCTTGAGAATGCTCCAGCAGCATTGTTTGGACTTTTTAAGGGTCACAACATTGGAAAACAAGTAGTTGCAGTTGATCATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

360

Amino Acids

40.03

Weight (kDa)

6.31

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N_2 PF16884 33 - 132 7.9e-17 N-terminal domain of oxidoreductase
ADH_zinc_N PF00107 181 - 313 6.4e-22 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 215 - 354 3.8e-08 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000431)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26320 AT1G26320 AT3G03080 AT3G59845 AT3G59845 AT5G16960 AT5G16960 AT5G16970 AT5G16980 AT5G16980 AT5G16980 AT5G16990 AT5G17000 AT5G17000 AT5G37940 AT5G37960 AT5G37980 AT5G38000 AT5G38000 AT5G38000
fragaria_vesca FvH4_1g00340 FvH4_1g18790 FvH4_1g23120 FvH4_1g23120
malus_domestica MD00G1045700.v1.1 MD01G1046700.v1.1 MD02G1163900.v1.1 MD15G1145600.v1.1 MD16G1282000.v1.1
prunus_persica Prupe.1G543700_v2.0.a1 Prupe.4G262000_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.4G262300_v2.0.a1 Prupe.6G211500_v2.0.a1 Prupe.7G269100_v2.0.a1
pyrus_communis pycom02g00040 pycom02g13040 pycom11g16640 pycom12561g00320 pycom15g13080 pycom16g25160
rosa_chinensis RchiOBHm_Chr2g0084641 RchiOBHm_Chr2g0084711 RchiOBHm_Chr2g0085361 RchiOBHm_Chr2g0085371 RchiOBHm_Chr2g0109651 RchiOBHm_Chr2g0117841 RchiOBHm_Chr6g0275751
rosa_laevigata RLG00000013436 RLG00000015629 RLG00000015633 RLG00000015680 RLG00000015681 RLG00000017753 RLG00000018376
rosa_multiflora Rmu_sc0000332.1_g000060 Rmu_sc0002352.1_g000008 Rmu_sc0002352.1_g000012 Rmu_sc0010860.1_g000005 Rmu_sc0012119.1_g000008
rosa_roxburghii Rroxscaffold_2G00126190 Rroxscaffold_2G00134060 Rroxscaffold_2G00155420 Rroxscaffold_2G00155430 Rroxscaffold_2G00155880 Rroxscaffold_2G00155890
rosa_rugosa Rorug01G0455500 Rorug01G0455600 Rorug01G0459700 Rorug01G0459800 Rorug01G0459800 Rorug01G0459900 Rorug02G0161600 Rorug02G0214400
rosa_samantha Rh2BG008800 Rh2BG282100 Rh2CG003900 Rh2CG004600 Rh2CG009500 Rh2CG009600 Rh2CG216100 Rh2CG216200 Rh2CG269100 Rh2CG269200 Rh2DG003700 Rh2DG004100 Rh2DG009900 Rh2DG219300 Rh2DG278400
rosa_wichuraiana Rw2G000300 Rw2G000330 Rw2G000770 Rw2G000780 Rw2G021390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 317
Acc36I ACCTGC 1 cut(s) 317
AccB7I CCANNNNNTGG 1 cut(s) 275
AccI GTMKAC 3 cut(s) 222, 249, 877
AciI CCGC 4 cut(s) 193, 468, 744, 761
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 2 cut(s) 559, 787
AcsI RAATTY 3 cut(s) 444, 488, 926
AcuI CTGAAG 1 cut(s) 312
AdeI CACNNNGTG 1 cut(s) 865
AfaI GTAC 4 cut(s) 454, 607, 821, 869
AfeI AGCGCT 1 cut(s) 85
AfiI CCNNNNNNNGG 3 cut(s) 192, 275, 506
AgsI TTSAA 6 cut(s) 106, 138, 631, 697, 956, 992
AjnI CCWGG 2 cut(s) 214, 709
AloI GAACNNNNNNTCC 2 cut(s) 882, 914
AluBI AGCT 3 cut(s) 109, 536, 553
AluI AGCT 3 cut(s) 109, 536, 553
AlwI GGATC 1 cut(s) 176
AlwNI CAGNNNCTG 1 cut(s) 536
Aor51HI AGCGCT 1 cut(s) 85
AoxI GGCC 3 cut(s) 559, 787, 994
ApeKI GCWGC 3 cut(s) 530, 533, 1013
ApoI RAATTY 3 cut(s) 444, 488, 926
Asp700I GAANNNNTTC 1 cut(s) 811
AspLEI GCGC 1 cut(s) 86
AsuC2I CCSGG 1 cut(s) 261
AsuHPI GGTGA 4 cut(s) 37, 37, 341, 856
BaeGI GKGCMC 1 cut(s) 426
BaeI ACNNNNGTAYC 2 cut(s) 405, 438
BalI TGGCCA 1 cut(s) 561
BarI GAAGNNNNNNTAC 4 cut(s) 152, 184, 589, 621
BbsI GAAGAC 2 cut(s) 757, 987
BbvI GCAGC 3 cut(s) 542, 545, 1025
BceAI ACGGC 1 cut(s) 134
BciT130I CCWGG 2 cut(s) 216, 711
BclI TGATCA 3 cut(s) 829, 904, 1069
BcnI CCSGG 1 cut(s) 261
BfaI CTAG 1 cut(s) 93
BfoI RGCGCY 1 cut(s) 87
BfuAI ACCTGC 1 cut(s) 317
BisI GCNGC 5 cut(s) 194, 531, 534, 745, 1014
BlsI GCNGC 5 cut(s) 195, 532, 535, 746, 1015
Bme1390I CCNGG 3 cut(s) 216, 261, 711
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 3 cut(s) 216, 261, 711
BmsI GCATC 3 cut(s) 748, 846, 928
BpiI GAAGAC 2 cut(s) 757, 987
BpmI CTGGAG 2 cut(s) 732, 993
BpuEI CTTGAG 1 cut(s) 1019
BpuMI CCSGG 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 234
BsaBI GATNNNNATC 1 cut(s) 909
BsaJI CCNNGG 3 cut(s) 214, 784, 886
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 3 cut(s) 192, 275, 506
Bse1I ACTGG 1 cut(s) 463
Bse8I GATNNNNATC 1 cut(s) 909
BseBI CCWGG 2 cut(s) 216, 711
BseDI CCNNGG 3 cut(s) 214, 784, 886
BseGI GGATG 3 cut(s) 691, 763, 919
BseJI GATNNNNATC 1 cut(s) 909
BseLI CCNNNNNNNGG 3 cut(s) 192, 275, 506
BseNI ACTGG 1 cut(s) 463
BseSI GKGCMC 1 cut(s) 426
BseXI GCAGC 3 cut(s) 542, 545, 1025
BshFI GGCC 3 cut(s) 561, 789, 996
BsiSI CCGG 1 cut(s) 261
BslFI GGGAC 1 cut(s) 358
BslI CCNNNNNNNGG 3 cut(s) 192, 275, 506
BsmFI GGGAC 1 cut(s) 358
BsmI GAATGC 1 cut(s) 1009
BsnI GGCC 3 cut(s) 561, 789, 996
Bsp1286I GDGCHC 1 cut(s) 426
Bsp1407I TGTACA 1 cut(s) 867
Bsp143I GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
Bsp19I CCATGG 2 cut(s) 784, 886
BspACI CCGC 4 cut(s) 193, 468, 744, 761
BspANI GGCC 3 cut(s) 561, 789, 996
BspHI TCATGA 1 cut(s) 1072
BspLI GGNNCC 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 317
BspPI GGATC 1 cut(s) 176
BspQI GCTCTTC 1 cut(s) 626
BsrGI TGTACA 1 cut(s) 867
BsrI ACTGG 1 cut(s) 463
BssECI CCNNGG 3 cut(s) 214, 784, 886
BssMI GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
BssNAI GTATAC 1 cut(s) 878
BssT1I CCWWGG 2 cut(s) 784, 886
Bst1107I GTATAC 1 cut(s) 878
Bst2UI CCWGG 2 cut(s) 216, 711
Bst4CI ACNGT 2 cut(s) 819, 898
Bst6I CTCTTC 2 cut(s) 626, 666
BstAPI GCANNNNNTGC 1 cut(s) 539
BstAUI TGTACA 1 cut(s) 867
BstBAI YACGTR 1 cut(s) 234
BstC8I GCNNGC 1 cut(s) 266
BstDEI CTNAG 2 cut(s) 609, 931
BstDSI CCRYGG 2 cut(s) 784, 886
BstEII GGTNACC 1 cut(s) 844
BstF5I GGATG 3 cut(s) 691, 763, 919
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 1 cut(s) 86
BstKTI GATC 6 cut(s) 184, 625, 832, 907, 969, 1072
BstMBI GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
BstMWI GCNNNNNNNGC 2 cut(s) 539, 1013
BstNI CCWGG 2 cut(s) 216, 711
BstPI GGTNACC 1 cut(s) 844
BstSCI CCNGG 3 cut(s) 214, 259, 709
BstSLI GKGCMC 1 cut(s) 426
BstSNI TACGTA 1 cut(s) 234
BstV1I GCAGC 3 cut(s) 542, 545, 1025
BstV2I GAAGAC 2 cut(s) 757, 987
BstZ17I GTATAC 1 cut(s) 878
BsuRI GGCC 3 cut(s) 561, 789, 996
BtgI CCRYGG 2 cut(s) 784, 886
BtsCI GGATG 3 cut(s) 691, 763, 919
BtsIMutI CAGTG 1 cut(s) 408
BveI ACCTGC 1 cut(s) 317
Cac8I GCNNGC 1 cut(s) 266
CaiI CAGNNNCTG 1 cut(s) 536
CciI TCATGA 1 cut(s) 1072
CfoI GCGC 1 cut(s) 86
CseI GACGC 1 cut(s) 662
Csp6I GTAC 4 cut(s) 453, 606, 820, 868
CviAII CATG 4 cut(s) 775, 785, 887, 1073
CviQI GTAC 4 cut(s) 453, 606, 820, 868
DdeI CTNAG 2 cut(s) 609, 931
DpnI GATC 6 cut(s) 183, 624, 831, 906, 968, 1071
DpnII GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
DraIII CACNNNGTG 1 cut(s) 865
EaeI YGGCCR 2 cut(s) 559, 787
Eam1104I CTCTTC 2 cut(s) 626, 666
EarI CTCTTC 2 cut(s) 626, 666
Eco105I TACGTA 1 cut(s) 234
Eco130I CCWWGG 2 cut(s) 784, 886
Eco147I AGGCCT 1 cut(s) 996
Eco47III AGCGCT 1 cut(s) 85
Eco57I CTGAAG 1 cut(s) 312
Eco91I GGTNACC 1 cut(s) 844
EcoO65I GGTNACC 1 cut(s) 844
EcoRI GAATTC 2 cut(s) 444, 488
EcoRII CCWGG 2 cut(s) 214, 709
EcoT14I CCWWGG 2 cut(s) 784, 886
ErhI CCWWGG 2 cut(s) 784, 886
FaeI CATG 4 cut(s) 778, 788, 890, 1076
FaqI GGGAC 1 cut(s) 358
FatI CATG 4 cut(s) 774, 784, 886, 1072
FbaI TGATCA 3 cut(s) 829, 904, 1069
FblI GTMKAC 3 cut(s) 222, 249, 877
Fnu4HI GCNGC 5 cut(s) 194, 531, 534, 745, 1014
FokI GGATG 3 cut(s) 698, 770, 906
Fsp4HI GCNGC 5 cut(s) 194, 531, 534, 745, 1014
FspBI CTAG 1 cut(s) 93
GlaI GCGC 1 cut(s) 85
GluI GCNGC 5 cut(s) 194, 531, 534, 745, 1014
GsuI CTGGAG 2 cut(s) 732, 993
HaeII RGCGCY 1 cut(s) 87
HaeIII GGCC 3 cut(s) 561, 789, 996
HapII CCGG 1 cut(s) 261
HgaI GACGC 1 cut(s) 662
HhaI GCGC 1 cut(s) 86
Hin1II CATG 4 cut(s) 778, 788, 890, 1076
Hin6I GCGC 1 cut(s) 84
HinP1I GCGC 1 cut(s) 84
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 5 cut(s) 62, 219, 227, 246, 302
HpaII CCGG 1 cut(s) 261
HphI GGTGA 4 cut(s) 37, 37, 341, 856
Hpy166II GTNNAC 4 cut(s) 223, 250, 868, 878
Hpy188I TCNGA 3 cut(s) 57, 67, 501
Hpy188III TCNNGA 3 cut(s) 827, 902, 1073
Hpy8I GTNNAC 4 cut(s) 223, 250, 868, 878
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 2 cut(s) 833, 986
HpyCH4III ACNGT 2 cut(s) 819, 898
HpyCH4IV ACGT 3 cut(s) 5, 233, 474
HpyCH4V TGCA 3 cut(s) 859, 919, 1064
HpyF10VI GCNNNNNNNGC 2 cut(s) 539, 1013
HpyF3I CTNAG 2 cut(s) 609, 931
HpySE526I ACGT 3 cut(s) 5, 233, 474
Hsp92II CATG 4 cut(s) 778, 788, 890, 1076
HspAI GCGC 1 cut(s) 84
Ksp22I TGATCA 3 cut(s) 829, 904, 1069
Kzo9I GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
LguI GCTCTTC 1 cut(s) 626
LmnI GCTCC 2 cut(s) 358, 1012
Lsp1109I GCAGC 3 cut(s) 542, 545, 1025
LweI GCATC 3 cut(s) 748, 846, 928
MaeI CTAG 1 cut(s) 93
MaeII ACGT 3 cut(s) 5, 233, 474
MaeIII GTNAC 6 cut(s) 43, 76, 329, 677, 844, 1037
MalI GATC 6 cut(s) 183, 624, 831, 906, 968, 1071
MboI GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
MboII GAAGA 8 cut(s) 172, 218, 514, 643, 683, 757, 976, 992
MhlI GDGCHC 1 cut(s) 426
MlsI TGGCCA 1 cut(s) 561
MluCI AATT 7 cut(s) 352, 444, 488, 564, 792, 850, 926
MluNI TGGCCA 1 cut(s) 561
MlyI GAGTC 3 cut(s) 228, 255, 296
MmeI TCCRAC 2 cut(s) 279, 574
MnlI CCTC 5 cut(s) 27, 176, 401, 707, 779
Mox20I TGGCCA 1 cut(s) 561
MroXI GAANNNNTTC 1 cut(s) 811
MscI TGGCCA 1 cut(s) 561
MseI TTAA 3 cut(s) 321, 660, 1032
Msp20I TGGCCA 1 cut(s) 561
MspA1I CMGCKG 2 cut(s) 193, 536
MspI CCGG 1 cut(s) 261
MspR9I CCNGG 3 cut(s) 216, 261, 711
Mva1269I GAATGC 1 cut(s) 1009
MvaI CCWGG 2 cut(s) 216, 711
MwoI GCNNNNNNNGC 2 cut(s) 539, 1013
NciI CCSGG 1 cut(s) 261
NcoI CCATGG 2 cut(s) 784, 886
NdeII GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
NlaIII CATG 4 cut(s) 778, 788, 890, 1076
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 6 cut(s) 43, 76, 329, 677, 844, 1037
PagI TCATGA 1 cut(s) 1072
PaqCI CACCTGC 1 cut(s) 317
PceI AGGCCT 1 cut(s) 996
PciSI GCTCTTC 1 cut(s) 626
PctI GAATGC 1 cut(s) 1009
PdmI GAANNNNTTC 1 cut(s) 811
PfeI GAWTC 2 cut(s) 62, 227
PflMI CCANNNNNTGG 1 cut(s) 275
PfoI TCCNGGA 1 cut(s) 709
PkrI GCNGC 5 cut(s) 195, 532, 535, 746, 1015
PleI GAGTC 3 cut(s) 227, 254, 296
PpsI GAGTC 3 cut(s) 227, 254, 296
Ppu21I YACGTR 1 cut(s) 234
Psp6I CCWGG 2 cut(s) 214, 709
PspEI GGTNACC 1 cut(s) 844
PspGI CCWGG 2 cut(s) 214, 709
PspN4I GGNNCC 1 cut(s) 144
PstNI CAGNNNCTG 1 cut(s) 536
PvuII CAGCTG 1 cut(s) 536
RsaI GTAC 4 cut(s) 454, 607, 821, 869
RsaNI GTAC 4 cut(s) 453, 606, 820, 868
SalI GTCGAC 1 cut(s) 221
SapI GCTCTTC 1 cut(s) 626
SaqAI TTAA 3 cut(s) 321, 660, 1032
SatI GCNGC 5 cut(s) 194, 531, 534, 745, 1014
Sau3AI GATC 6 cut(s) 181, 622, 829, 904, 966, 1069
SchI GAGTC 3 cut(s) 228, 255, 296
ScrFI CCNGG 3 cut(s) 216, 261, 711
SduI GDGCHC 1 cut(s) 426
SfaNI GCATC 3 cut(s) 748, 846, 928
SmlI CTYRAG 1 cut(s) 998
SmoI CTYRAG 1 cut(s) 998
SnaBI TACGTA 1 cut(s) 234
Sse9I AATT 7 cut(s) 352, 444, 488, 564, 792, 850, 926
SseBI AGGCCT 1 cut(s) 996
SsiI CCGC 4 cut(s) 193, 468, 744, 761
SspMI CTAG 1 cut(s) 93
StuI AGGCCT 1 cut(s) 996
StyD4I CCNGG 3 cut(s) 214, 259, 709
StyI CCWWGG 2 cut(s) 784, 886
TaaI ACNGT 2 cut(s) 819, 898
TaiI ACGT 3 cut(s) 8, 236, 477
TaqI TCGA 1 cut(s) 222
TasI AATT 7 cut(s) 352, 444, 488, 564, 792, 850, 926
TatI WGTACW 2 cut(s) 819, 867
TauI GCSGC 2 cut(s) 196, 747
TfiI GAWTC 2 cut(s) 62, 227
Tru1I TTAA 3 cut(s) 321, 660, 1032
Tru9I TTAA 3 cut(s) 321, 660, 1032
TscAI CASTG 1 cut(s) 415
TseFI GTSAC 6 cut(s) 43, 76, 329, 677, 844, 1037
TseI GCWGC 3 cut(s) 530, 533, 1013
Tsp45I GTSAC 6 cut(s) 43, 76, 329, 677, 844, 1037
TspDTI ATGAA 2 cut(s) 501, 928
TspRI CASTG 1 cut(s) 415
Van91I CCANNNNNTGG 1 cut(s) 275
XapI RAATTY 3 cut(s) 444, 488, 926
XmiI GTMKAC 3 cut(s) 222, 249, 877
XmnI GAANNNNTTC 1 cut(s) 811
XspI CTAG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.