Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000676

Physical Location & Seq

Genomic Coordinates Forward (+)

12611638 .. 12612663

Gene Structure 1026 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G34500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGAGGAAGAACTCAAGAATTTCATCATAGTGTGGATTTCTGCAATAATCTCAGTATCATACTGTTACTACATATCTGCCAATATCAAAACCGGTGTTCTTCGATTATTCTCTGTTCTTCCGATATGTGGTCTGTTCTTTGTACTTCCTTTGTTCTTCTCCTCTGTGCATTTCTCTAGCTCCACAGCATTTTACCTCTCCGAGATGGCCAGTTTAAAGCTTATCCTGTTTGCATTTGATCAAGGACCTCTTTTCCCAGTTGCTCCTAATCTCATCCAATTTGTCTGCTTCACTTGCTTCCCCATCAAGCTTCAGAGAAACCCTAAATCTCAGCCATCACAAAACCATTTCCACAAACGAGCTTTCGCCATTAAAATCATGATATTTGGTGTTGTGTTACATGTGTACAACTACAGTCATTTTCTGCCTCAGACTGTGCTATTGAGTCTCTGTTTCCTGCATCTATACGTGGAGCTTGAGATTCTCTTAGGTCCCCTCAAAGTTCTGCTAAGTATGGCTCTTGGGTGTGATCTCGAGCCACAATTCAACAAACCGTACTTAGCCACCTCACTTCAAGACTTTTGGGGTCGCCGTTGGAACCTCATGGTCTCGTCTGTCCTCCGGTCAGGCATCTACAATCCTGTGCGGTGCGCTTGCCAACGCCCAATGAATTCTGGTTGGGCTAGGTTCATGGGGTATTTGGTAACGTTCCTTGTCTCCGGTCTGTTTCACGAGCTTGTATACTTTTATATAACTCGTGAGACTCCTACATGGGAGGTCACTTTGTTCTTTGTGCTAAATGGGGTTTGCACGGGGACAGAGGTGGCTGTGAAGAGGACAGCGTTTTTACAGCGGTGGTGGCCAGTGAGATCGTCAGTGTCACGGCTTCTCACGATGGGATTTGTAGTTGTCACCGGTGGTTTGCTGTTTTTTCCTCTGTTTATACGGAGCGGCATGATGGAGAGACGCGCCAATGAGACCTTGTTCTTCCTTGATTTCGTGAAGCGCAAGTTTTCCATTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT_2

Protein Analysis

341

Amino Acids

39.35

Weight (kDa)

9.45

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT_2	PF13813	179 - 266	2e-19	Membrane bound O-acyl transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34490 AT1G34500 AT1G34520 AT5G51420 AT5G55320 AT5G55330 AT5G55340 AT5G55350 AT5G55360 AT5G55370 AT5G55380
fragaria_vesca	FvH4_1g25220 FvH4_2g09840
malus_domestica	MD03G1191100.v1.1 MD03G1191200.v1.1 MD11G1208100.v1.1
prunus_persica	Prupe.4G227200_v2.0.a1 Prupe.4G227400_v2.0.a1
pyrus_communis	pycom03g14430 pycom11g18170 pycom11g18340
rosa_chinensis	RchiOBHm_Chr2g0123061 RchiOBHm_Chr2g0123071 RchiOBHm_Chr2g0123131 RchiOBHm_Chr6g0266191 RchiOBHm_Chr6g0266201 RchiOBHm_Chr6g0266251 RchiOBHm_Chr6g0266341
rosa_laevigata	RLG00000014105 RLG00000014107 RLG00000018729 RLG00000018730 RLG00000023150
rosa_multiflora	Rmu_sc0000168.1_g000022 Rmu_sc0002235.1_g000075 Rmu_sc0003605.1_g000042 Rmu_sc0005573.1_g000002 Rmu_sc0005573.1_g000004 Rmu_sc0009036.1_g000008 Rmu_sc0009589.1_g000002
rosa_roxburghii	Rroxscaffold_2G00120900 Rroxscaffold_2G00120910 Rroxscaffold_6G00397020 Rroxscaffold_7G00201410 Rroxscaffold_7G00201760 Rroxscaffold_7G00201820
rosa_rugosa	Rorug02G0243000 Rorug02G0243100 Rorug03G0217500 Rorug06G0024700
rosa_samantha	Rh2AG302700 Rh2AG302800 Rh2BG310300 Rh2BG310400 Rh2BG310600 Rh2CG289000 Rh2CG289200 Rh2DG326800 Rh3BG302500 Rh3BG302800 Rh3BG303100 Rh3BG303200 Rh6AG145400 Rh6AG148500 Rh6BG146000 Rh6CG142600 Rh6DG130500
rosa_wichuraiana	Rw0G004920 Rw0G004930 Rw2G024180 Rw2G024190 Rw3G023820 Rw3G023880 Rw6G012560 Rw6G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	951
AccI	GTMKAC	1 cut(s)	741
AccII	CGCG	1 cut(s)	969
AciI	CCGC	3 cut(s)	646, 853, 951
AclI	AACGTT	1 cut(s)	707
AcoI	YGGCCR	2 cut(s)	207, 860
AcsI	RAATTY	2 cut(s)	19, 670
AcuI	CTGAAG	1 cut(s)	296
AfaI	GTAC	3 cut(s)	144, 407, 557
AfiI	CCNNNNNNNGG	1 cut(s)	128
AflIII	ACRYGT	1 cut(s)	400
AgeI	ACCGGT	2 cut(s)	92, 914
AgsI	TTSAA	2 cut(s)	547, 575
AluBI	AGCT	6 cut(s)	180, 220, 310, 362, 475, 736
AluI	AGCT	6 cut(s)	180, 220, 310, 362, 475, 736
Alw26I	GTCTC	6 cut(s)	452, 613, 721, 755, 958, 971
Ama87I	CYCGRG	1 cut(s)	533
AoxI	GGCC	2 cut(s)	207, 860
ApoI	RAATTY	2 cut(s)	19, 670
AsiGI	ACCGGT	2 cut(s)	92, 914
AspLEI	GCGC	3 cut(s)	653, 971, 1008
AspS9I	GGNCC	2 cut(s)	245, 491
AsuHPI	GGTGA	1 cut(s)	904
AvaI	CYCGRG	1 cut(s)	533
AvaII	GGWCC	2 cut(s)	245, 491
BalI	TGGCCA	2 cut(s)	209, 862
BauI	CACGAG	2 cut(s)	731, 756
BccI	CCATC	5 cut(s)	199, 311, 343, 889, 952
BceAI	ACGGC	2 cut(s)	576, 899
BclI	TGATCA	1 cut(s)	238
BcoDI	GTCTC	6 cut(s)	452, 613, 721, 755, 958, 971
BfaI	CTAG	3 cut(s)	177, 684, 1024
BfmI	CTRYAG	1 cut(s)	412
BisI	GCNGC	1 cut(s)	952
BlsI	GCNGC	1 cut(s)	953
Bme18I	GGWCC	2 cut(s)	245, 491
BmeT110I	CYCGRG	1 cut(s)	533
BmgT120I	GGNCC	2 cut(s)	245, 491
BmiI	GGNNCC	2 cut(s)	493, 599
BmrI	ACTGGG	1 cut(s)	251
BmsI	GCATC	2 cut(s)	469, 639
BmuI	ACTGGG	1 cut(s)	251
BpuEI	CTTGAG	1 cut(s)	497
BsaAI	YACGTR	1 cut(s)	469
BsaI	GGTCTC	2 cut(s)	613, 971
BsaWI	WCCGGW	4 cut(s)	92, 621, 719, 914
Bsc4I	CCNNNNNNNGG	1 cut(s)	128
Bse118I	RCCGGY	2 cut(s)	92, 914
Bse1I	ACTGG	3 cut(s)	210, 257, 863
BseGI	GGATG	1 cut(s)	273
BseLI	CCNNNNNNNGG	1 cut(s)	128
BseMII	CTCAG	3 cut(s)	66, 344, 443
BseNI	ACTGG	3 cut(s)	210, 257, 863
BseRI	GAGGAG	1 cut(s)	151
Bsh1236I	CGCG	1 cut(s)	969
BshFI	GGCC	2 cut(s)	209, 862
BshTI	ACCGGT	2 cut(s)	92, 914
BsiHKCI	CYCGRG	1 cut(s)	533
BsiSI	CCGG	4 cut(s)	93, 622, 720, 915
BslFI	GGGAC	2 cut(s)	477, 829
BslI	CCNNNNNNNGG	1 cut(s)	128
BsmAI	GTCTC	6 cut(s)	452, 613, 721, 755, 958, 971
BsmBI	CGTCTC	1 cut(s)	958
BsmFI	GGGAC	2 cut(s)	477, 829
BsnI	GGCC	2 cut(s)	209, 862
Bso31I	GGTCTC	2 cut(s)	613, 971
BsoBI	CYCGRG	1 cut(s)	533
Bsp1407I	TGTACA	1 cut(s)	405
Bsp143I	GATC	3 cut(s)	238, 529, 869
BspACI	CCGC	3 cut(s)	646, 853, 951
BspANI	GGCC	2 cut(s)	209, 862
BspCNI	CTCAG	3 cut(s)	65, 343, 442
BspFNI	CGCG	1 cut(s)	969
BspHI	TCATGA	1 cut(s)	378
BspLI	GGNNCC	2 cut(s)	493, 599
BspTNI	GGTCTC	2 cut(s)	613, 971
BsrBI	CCGCTC	1 cut(s)	951
BsrFI	RCCGGY	2 cut(s)	92, 914
BsrGI	TGTACA	1 cut(s)	405
BsrI	ACTGG	3 cut(s)	210, 257, 863
BssAI	RCCGGY	2 cut(s)	92, 914
BssMI	GATC	3 cut(s)	238, 529, 869
BssNAI	GTATAC	1 cut(s)	742
BssSI	CACGAG	2 cut(s)	731, 756
Bst1107I	GTATAC	1 cut(s)	742
Bst2BI	CACGAG	2 cut(s)	731, 756
Bst4CI	ACNGT	4 cut(s)	65, 416, 436, 555
Bst6I	CTCTTC	1 cut(s)	827
BstAUI	TGTACA	1 cut(s)	405
BstBAI	YACGTR	1 cut(s)	469
BstC8I	GCNNGC	1 cut(s)	655
BstDEI	CTNAG	6 cut(s)	52, 330, 429, 487, 509, 559
BstF5I	GGATG	1 cut(s)	273
BstFNI	CGCG	1 cut(s)	969
BstHHI	GCGC	3 cut(s)	653, 971, 1008
BstKTI	GATC	3 cut(s)	241, 532, 872
BstMAI	GTCTC	6 cut(s)	452, 613, 721, 755, 958, 971
BstMBI	GATC	3 cut(s)	238, 529, 869
BstMWI	GCNNNNNNNGC	2 cut(s)	294, 859
BstNSI	RCATGY	1 cut(s)	404
BstSFI	CTRYAG	1 cut(s)	412
BstUI	CGCG	1 cut(s)	969
BstZ17I	GTATAC	1 cut(s)	742
BsuRI	GGCC	2 cut(s)	209, 862
BtsCI	GGATG	1 cut(s)	273
BtsIMutI	CAGTG	2 cut(s)	870, 882
Cac8I	GCNNGC	1 cut(s)	655
CciI	TCATGA	1 cut(s)	378
CfoI	GCGC	3 cut(s)	653, 971, 1008
Cfr10I	RCCGGY	2 cut(s)	92, 914
Cfr13I	GGNCC	2 cut(s)	245, 491
CseI	GACGC	1 cut(s)	975
Csp6I	GTAC	3 cut(s)	143, 406, 556
CspAI	ACCGGT	2 cut(s)	92, 914
CviAII	CATG	6 cut(s)	379, 401, 604, 691, 771, 955
CviQI	GTAC	3 cut(s)	143, 406, 556
DdeI	CTNAG	6 cut(s)	52, 330, 429, 487, 509, 559
DpnI	GATC	3 cut(s)	240, 531, 871
DpnII	GATC	3 cut(s)	238, 529, 869
DraI	TTTAAA	1 cut(s)	216
EaeI	YGGCCR	2 cut(s)	207, 860
Eam1104I	CTCTTC	1 cut(s)	827
EarI	CTCTTC	1 cut(s)	827
Eco31I	GGTCTC	2 cut(s)	613, 971
Eco47I	GGWCC	2 cut(s)	245, 491
Eco57I	CTGAAG	1 cut(s)	296
Eco88I	CYCGRG	1 cut(s)	533
EcoO109I	RGGNCCY	2 cut(s)	245, 491
EcoRI	GAATTC	1 cut(s)	670
Esp3I	CGTCTC	1 cut(s)	958
FaeI	CATG	6 cut(s)	382, 404, 607, 694, 774, 958
FalI	AAGNNNNNCTT	2 cut(s)	234, 266
FaqI	GGGAC	2 cut(s)	477, 829
FatI	CATG	6 cut(s)	378, 400, 603, 690, 770, 954
FbaI	TGATCA	1 cut(s)	238
FblI	GTMKAC	1 cut(s)	741
Fnu4HI	GCNGC	1 cut(s)	952
FokI	GGATG	1 cut(s)	260
Fsp4HI	GCNGC	1 cut(s)	952
FspBI	CTAG	3 cut(s)	177, 684, 1024
GlaI	GCGC	3 cut(s)	652, 970, 1007
GluI	GCNGC	1 cut(s)	952
HaeIII	GGCC	2 cut(s)	209, 862
HapII	CCGG	4 cut(s)	93, 622, 720, 915
HgaI	GACGC	1 cut(s)	975
HhaI	GCGC	3 cut(s)	653, 971, 1008
Hin1II	CATG	6 cut(s)	382, 404, 607, 694, 774, 958
Hin6I	GCGC	3 cut(s)	651, 969, 1006
HinP1I	GCGC	3 cut(s)	651, 969, 1006
HindIII	AAGCTT	2 cut(s)	218, 308
HinfI	GANTC	3 cut(s)	445, 481, 763
HpaII	CCGG	4 cut(s)	93, 622, 720, 915
HphI	GGTGA	1 cut(s)	904
Hpy166II	GTNNAC	2 cut(s)	406, 742
Hpy188I	TCNGA	4 cut(s)	123, 202, 315, 432
Hpy188III	TCNNGA	8 cut(s)	16, 379, 533, 575, 731, 758, 892, 1000
Hpy8I	GTNNAC	2 cut(s)	406, 742
HpyCH4III	ACNGT	4 cut(s)	65, 416, 436, 555
HpyCH4IV	ACGT	2 cut(s)	468, 707
HpyCH4V	TGCA	5 cut(s)	44, 169, 233, 460, 810
HpyF10VI	GCNNNNNNNGC	2 cut(s)	294, 859
HpyF3I	CTNAG	6 cut(s)	52, 330, 429, 487, 509, 559
HpySE526I	ACGT	2 cut(s)	468, 707
Hsp92II	CATG	6 cut(s)	382, 404, 607, 694, 774, 958
HspAI	GCGC	3 cut(s)	651, 969, 1006
Ksp22I	TGATCA	1 cut(s)	238
Kzo9I	GATC	3 cut(s)	238, 529, 869
LmnI	GCTCC	4 cut(s)	185, 268, 472, 948
LweI	GCATC	2 cut(s)	469, 639
MaeI	CTAG	3 cut(s)	177, 684, 1024
MaeII	ACGT	2 cut(s)	468, 707
MaeIII	GTNAC	6 cut(s)	65, 396, 703, 778, 879, 910
MalI	GATC	3 cut(s)	240, 531, 871
MbiI	CCGCTC	1 cut(s)	951
MboI	GATC	3 cut(s)	238, 529, 869
MboII	GAAGA	6 cut(s)	20, 92, 110, 148, 844, 979
MlsI	TGGCCA	2 cut(s)	209, 862
MluCI	AATT	4 cut(s)	19, 278, 542, 670
MluNI	TGGCCA	2 cut(s)	209, 862
MlyI	GAGTC	2 cut(s)	454, 757
MmeI	TCCRAC	1 cut(s)	575
Mox20I	TGGCCA	2 cut(s)	209, 862
MscI	TGGCCA	2 cut(s)	209, 862
MseI	TTAA	2 cut(s)	215, 372
MslI	CAYNNNNRTG	1 cut(s)	29
Msp20I	TGGCCA	2 cut(s)	209, 862
MspA1I	CMGCKG	1 cut(s)	853
MspI	CCGG	4 cut(s)	93, 622, 720, 915
MvnI	CGCG	1 cut(s)	969
MwoI	GCNNNNNNNGC	2 cut(s)	294, 859
NdeII	GATC	3 cut(s)	238, 529, 869
NlaIII	CATG	6 cut(s)	382, 404, 607, 694, 774, 958
NlaIV	GGNNCC	2 cut(s)	493, 599
NmuCI	GTSAC	3 cut(s)	778, 879, 910
NspI	RCATGY	1 cut(s)	404
PaeR7I	CTCGAG	1 cut(s)	533
PagI	TCATGA	1 cut(s)	378
PciI	ACATGT	1 cut(s)	400
PfeI	GAWTC	1 cut(s)	481
PinAI	ACCGGT	2 cut(s)	92, 914
PkrI	GCNGC	1 cut(s)	953
PleI	GAGTC	2 cut(s)	453, 757
PpsI	GAGTC	2 cut(s)	453, 757
Ppu21I	YACGTR	1 cut(s)	469
PpuMI	RGGWCCY	2 cut(s)	245, 491
PscI	ACATGT	1 cut(s)	400
Psp1406I	AACGTT	1 cut(s)	707
Psp5II	RGGWCCY	2 cut(s)	245, 491
PspN4I	GGNNCC	2 cut(s)	493, 599
PspPI	GGNCC	2 cut(s)	245, 491
PspPPI	RGGWCCY	2 cut(s)	245, 491
RsaI	GTAC	3 cut(s)	144, 407, 557
RsaNI	GTAC	3 cut(s)	143, 406, 556
RseI	CAYNNNNRTG	1 cut(s)	29
SaqAI	TTAA	2 cut(s)	215, 372
SatI	GCNGC	1 cut(s)	952
Sau3AI	GATC	3 cut(s)	238, 529, 869
Sau96I	GGNCC	2 cut(s)	245, 491
SchI	GAGTC	2 cut(s)	454, 757
SfaNI	GCATC	2 cut(s)	469, 639
SfcI	CTRYAG	1 cut(s)	412
Sfr274I	CTCGAG	1 cut(s)	533
SgrAI	CRCCGGYG	1 cut(s)	914
SinI	GGWCC	2 cut(s)	245, 491
SlaI	CTCGAG	1 cut(s)	533
SmiMI	CAYNNNNRTG	1 cut(s)	29
SmlI	CTYRAG	3 cut(s)	14, 476, 533
SmoI	CTYRAG	3 cut(s)	14, 476, 533
Sse9I	AATT	4 cut(s)	19, 278, 542, 670
SsiI	CCGC	3 cut(s)	646, 853, 951
SspMI	CTAG	3 cut(s)	177, 684, 1024
TaaI	ACNGT	4 cut(s)	65, 416, 436, 555
TaiI	ACGT	2 cut(s)	471, 710
TaqI	TCGA	2 cut(s)	103, 534
TasI	AATT	4 cut(s)	19, 278, 542, 670
TatI	WGTACW	2 cut(s)	142, 405
TauI	GCSGC	1 cut(s)	954
TfiI	GAWTC	1 cut(s)	481
Tru1I	TTAA	2 cut(s)	215, 372
Tru9I	TTAA	2 cut(s)	215, 372
TscAI	CASTG	2 cut(s)	870, 882
TseFI	GTSAC	3 cut(s)	778, 879, 910
Tsp45I	GTSAC	3 cut(s)	778, 879, 910
TspDTI	ATGAA	3 cut(s)	13, 679, 683
TspGWI	ACGGA	1 cut(s)	961
TspRI	CASTG	2 cut(s)	870, 882
VpaK11BI	GGWCC	2 cut(s)	245, 491
XapI	RAATTY	2 cut(s)	19, 670
XceI	RCATGY	1 cut(s)	404
XhoI	CTCGAG	1 cut(s)	533
XmiI	GTMKAC	1 cut(s)	741
XspI	CTAG	3 cut(s)	177, 684, 1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.