Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000676

Physical Location & Seq

Genomic Coordinates Forward (+)

26274447 .. 26274947

Gene Structure 501 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1191100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 501 bp

ATGTTCAAGCTCCTCCTCTTCTCCTTTGACCTTGGCCCTCTCTGTGCACCCCCACTAACTCTCTTCCAGTTCATCTCCATAGCTATCCTCCCCATCAAAATCATACAAAACCCCACAAACTCTGAGAACCCAAATTACCCAGTTGGTAAAACTGTTACAAACATGCCTAAAAAGTCGGTTTTGTTTGCTGTAAAAGCCTTGCTTTTGGCTTTGGTCGTTAGGTCATACGACTACAGGCAGCATTTACACCTGTATGTTATACTGGCCTTGTACTTCTGCCACATGTACTTAGGGCTAGAAATTGTAATGCCCCTGTGTGCGACCCCTGCTCGAGCTCTTTTCAGGTTTGATCTCGAGCCGCAGTCCAACGAGCCTTACCTTTCCACTTCCCTTCAAGACTTTTGGGGCCGTAGATGGAACCTCATGGTCACAAATATTCTACGGCCTACCACCTACGATCCAGTGCTCCGTATTTCTAAGCGTGTGGTCGGGCCTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT_2

Protein Analysis

167

Amino Acids

19.1

Weight (kDa)

9.64

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT_2	PF13813	119 - 160	4.4e-07	Membrane bound O-acyl transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34490 AT1G34500 AT1G34520 AT5G51420 AT5G55320 AT5G55330 AT5G55340 AT5G55350 AT5G55360 AT5G55370 AT5G55380
fragaria_vesca	FvH4_1g25220 FvH4_2g09840
malus_domestica	MD03G1191100.v1.1 MD03G1191200.v1.1 MD11G1208100.v1.1
prunus_persica	Prupe.4G227200_v2.0.a1 Prupe.4G227400_v2.0.a1
pyrus_communis	pycom03g14430 pycom11g18170 pycom11g18340
rosa_chinensis	RchiOBHm_Chr2g0123061 RchiOBHm_Chr2g0123071 RchiOBHm_Chr2g0123131 RchiOBHm_Chr6g0266191 RchiOBHm_Chr6g0266201 RchiOBHm_Chr6g0266251 RchiOBHm_Chr6g0266341
rosa_laevigata	RLG00000014105 RLG00000014107 RLG00000018729 RLG00000018730 RLG00000023150
rosa_multiflora	Rmu_sc0000168.1_g000022 Rmu_sc0002235.1_g000075 Rmu_sc0003605.1_g000042 Rmu_sc0005573.1_g000002 Rmu_sc0005573.1_g000004 Rmu_sc0009036.1_g000008 Rmu_sc0009589.1_g000002
rosa_roxburghii	Rroxscaffold_2G00120900 Rroxscaffold_2G00120910 Rroxscaffold_6G00397020 Rroxscaffold_7G00201410 Rroxscaffold_7G00201760 Rroxscaffold_7G00201820
rosa_rugosa	Rorug02G0243000 Rorug02G0243100 Rorug03G0217500 Rorug06G0024700
rosa_samantha	Rh2AG302700 Rh2AG302800 Rh2BG310300 Rh2BG310400 Rh2BG310600 Rh2CG289000 Rh2CG289200 Rh2DG326800 Rh3BG302500 Rh3BG302800 Rh3BG303100 Rh3BG303200 Rh6AG145400 Rh6AG148500 Rh6BG146000 Rh6CG142600 Rh6DG130500
rosa_wichuraiana	Rw0G004920 Rw0G004930 Rw2G024180 Rw2G024190 Rw3G023820 Rw3G023880 Rw6G012560 Rw6G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	359
AclWI	GGATC	1 cut(s)	452
AfaI	GTAC	2 cut(s)	272, 287
AflIII	ACRYGT	1 cut(s)	282
AgsI	TTSAA	2 cut(s)	7, 395
AluBI	AGCT	3 cut(s)	10, 83, 335
AluI	AGCT	3 cut(s)	10, 83, 335
Alw21I	GWGCWC	3 cut(s)	49, 337, 468
Alw44I	GTGCAC	1 cut(s)	45
AlwI	GGATC	1 cut(s)	452
Ama87I	CYCGRG	2 cut(s)	330, 353
AoxI	GGCC	5 cut(s)	34, 264, 406, 443, 491
ApaLI	GTGCAC	1 cut(s)	45
ApeKI	GCWGC	1 cut(s)	238
AspS9I	GGNCC	3 cut(s)	35, 406, 491
AvaI	CYCGRG	2 cut(s)	330, 353
BaeGI	GKGCMC	1 cut(s)	49
BanII	GRGCYC	1 cut(s)	337
Bbv12I	GWGCWC	3 cut(s)	49, 337, 468
BbvI	GCAGC	1 cut(s)	250
BccI	CCATC	2 cut(s)	101, 408
BceAI	ACGGC	2 cut(s)	393, 458
BfaI	CTAG	1 cut(s)	296
BfmI	CTRYAG	1 cut(s)	232
BisI	GCNGC	2 cut(s)	239, 359
BlsI	GCNGC	2 cut(s)	240, 360
BmeT110I	CYCGRG	2 cut(s)	330, 353
BmgT120I	GGNCC	3 cut(s)	35, 406, 491
BmiI	GGNNCC	2 cut(s)	407, 419
BmrI	ACTGGG	1 cut(s)	134
BmuI	ACTGGG	1 cut(s)	134
BsaJI	CCNNGG	2 cut(s)	31, 494
Bse1I	ACTGG	4 cut(s)	67, 140, 267, 461
BseDI	CCNNGG	2 cut(s)	31, 494
BseMII	CTCAG	1 cut(s)	114
BseNI	ACTGG	4 cut(s)	67, 140, 267, 461
BseRI	GAGGAG	1 cut(s)	5
BseSI	GKGCMC	1 cut(s)	49
BseXI	GCAGC	1 cut(s)	250
BshFI	GGCC	5 cut(s)	36, 266, 408, 445, 493
BsiHKAI	GWGCWC	3 cut(s)	49, 337, 468
BsiHKCI	CYCGRG	2 cut(s)	330, 353
BsnI	GGCC	5 cut(s)	36, 266, 408, 445, 493
BsoBI	CYCGRG	2 cut(s)	330, 353
Bsp1286I	GDGCHC	3 cut(s)	49, 337, 468
Bsp143I	GATC	2 cut(s)	349, 457
BspACI	CCGC	1 cut(s)	359
BspANI	GGCC	5 cut(s)	36, 266, 408, 445, 493
BspCNI	CTCAG	1 cut(s)	115
BspLI	GGNNCC	2 cut(s)	407, 419
BspPI	GGATC	1 cut(s)	452
BsrI	ACTGG	4 cut(s)	67, 140, 267, 461
BssECI	CCNNGG	2 cut(s)	31, 494
BssMI	GATC	2 cut(s)	349, 457
BssT1I	CCWWGG	1 cut(s)	31
Bst4CI	ACNGT	1 cut(s)	154
Bst6I	CTCTTC	2 cut(s)	23, 68
BstDEI	CTNAG	3 cut(s)	123, 289, 477
BstKTI	GATC	2 cut(s)	352, 460
BstMBI	GATC	2 cut(s)	349, 457
BstMWI	GCNNNNNNNGC	2 cut(s)	194, 326
BstNSI	RCATGY	2 cut(s)	166, 286
BstSFI	CTRYAG	1 cut(s)	232
BstSLI	GKGCMC	1 cut(s)	49
BstV1I	GCAGC	1 cut(s)	250
BsuRI	GGCC	5 cut(s)	36, 266, 408, 445, 493
BtsIMutI	CAGTG	1 cut(s)	468
Cfr13I	GGNCC	3 cut(s)	35, 406, 491
Csp6I	GTAC	2 cut(s)	271, 286
CviAII	CATG	3 cut(s)	163, 283, 424
CviQI	GTAC	2 cut(s)	271, 286
DdeI	CTNAG	3 cut(s)	123, 289, 477
DpnI	GATC	2 cut(s)	351, 459
DpnII	GATC	2 cut(s)	349, 457
Eam1104I	CTCTTC	2 cut(s)	23, 68
EarI	CTCTTC	2 cut(s)	23, 68
Ecl136II	GAGCTC	1 cut(s)	335
Eco130I	CCWWGG	1 cut(s)	31
Eco24I	GRGCYC	1 cut(s)	337
Eco53kI	GAGCTC	1 cut(s)	335
Eco88I	CYCGRG	2 cut(s)	330, 353
EcoICRI	GAGCTC	1 cut(s)	335
EcoT14I	CCWWGG	1 cut(s)	31
EcoT38I	GRGCYC	1 cut(s)	337
ErhI	CCWWGG	1 cut(s)	31
FaeI	CATG	3 cut(s)	166, 286, 427
FaiI	YATR	8 cut(s)	80, 104, 164, 226, 255, 260, 284, 425
FalI	AAGNNNNNCTT	2 cut(s)	186, 218
FatI	CATG	3 cut(s)	162, 282, 423
Fnu4HI	GCNGC	2 cut(s)	239, 359
FriOI	GRGCYC	1 cut(s)	337
Fsp4HI	GCNGC	2 cut(s)	239, 359
FspBI	CTAG	1 cut(s)	296
GluI	GCNGC	2 cut(s)	239, 359
HaeIII	GGCC	5 cut(s)	36, 266, 408, 445, 493
Hin1II	CATG	3 cut(s)	166, 286, 427
Hpy166II	GTNNAC	1 cut(s)	47
Hpy188I	TCNGA	1 cut(s)	124
Hpy188III	TCNNGA	2 cut(s)	353, 395
Hpy8I	GTNNAC	1 cut(s)	47
HpyAV	CCTTC	1 cut(s)	401
HpyCH4III	ACNGT	1 cut(s)	154
HpyCH4V	TGCA	1 cut(s)	47
HpyF10VI	GCNNNNNNNGC	2 cut(s)	194, 326
HpyF3I	CTNAG	3 cut(s)	123, 289, 477
Hsp92II	CATG	3 cut(s)	166, 286, 427
Kzo9I	GATC	2 cut(s)	349, 457
LmnI	GCTCC	2 cut(s)	15, 471
LpnPI	CCDG	9 cut(s)	80, 153, 220, 248, 263, 326, 328, 339, 474
Lsp1109I	GCAGC	1 cut(s)	250
MaeI	CTAG	1 cut(s)	296
MaeIII	GTNAC	2 cut(s)	154, 427
MalI	GATC	2 cut(s)	351, 459
MboI	GATC	2 cut(s)	349, 457
MboII	GAAGA	2 cut(s)	10, 55
MhlI	GDGCHC	3 cut(s)	49, 337, 468
MluCI	AATT	2 cut(s)	133, 300
MmeI	TCCRAC	1 cut(s)	390
MnlI	CCTC	5 cut(s)	23, 26, 48, 98, 431
MslI	CAYNNNNRTG	1 cut(s)	252
MwoI	GCNNNNNNNGC	2 cut(s)	194, 326
NdeII	GATC	2 cut(s)	349, 457
NlaIII	CATG	3 cut(s)	166, 286, 427
NlaIV	GGNNCC	2 cut(s)	407, 419
NmuCI	GTSAC	1 cut(s)	427
NspI	RCATGY	2 cut(s)	166, 286
PaeR7I	CTCGAG	2 cut(s)	330, 353
PciI	ACATGT	1 cut(s)	282
PkrI	GCNGC	2 cut(s)	240, 360
PscI	ACATGT	1 cut(s)	282
Psp124BI	GAGCTC	1 cut(s)	337
PspN4I	GGNNCC	2 cut(s)	407, 419
PspPI	GGNCC	3 cut(s)	35, 406, 491
PspXI	VCTCGAGB	1 cut(s)	330
PsrI	GAACNNNNNNTAC	2 cut(s)	119, 151
RsaI	GTAC	2 cut(s)	272, 287
RsaNI	GTAC	2 cut(s)	271, 286
RseI	CAYNNNNRTG	1 cut(s)	252
SacI	GAGCTC	1 cut(s)	337
SatI	GCNGC	2 cut(s)	239, 359
Sau3AI	GATC	2 cut(s)	349, 457
Sau96I	GGNCC	3 cut(s)	35, 406, 491
SduI	GDGCHC	3 cut(s)	49, 337, 468
SfcI	CTRYAG	1 cut(s)	232
Sfr274I	CTCGAG	2 cut(s)	330, 353
SlaI	CTCGAG	2 cut(s)	330, 353
SmiMI	CAYNNNNRTG	1 cut(s)	252
SmlI	CTYRAG	2 cut(s)	330, 353
SmoI	CTYRAG	2 cut(s)	330, 353
Sse9I	AATT	2 cut(s)	133, 300
SsiI	CCGC	1 cut(s)	359
SspI	AATATT	1 cut(s)	436
SspMI	CTAG	1 cut(s)	296
SstI	GAGCTC	1 cut(s)	337
StyI	CCWWGG	1 cut(s)	31
TaaI	ACNGT	1 cut(s)	154
TaqI	TCGA	2 cut(s)	331, 354
TasI	AATT	2 cut(s)	133, 300
TatI	WGTACW	2 cut(s)	270, 285
TauI	GCSGC	1 cut(s)	361
TscAI	CASTG	1 cut(s)	468
TseFI	GTSAC	1 cut(s)	427
TseI	GCWGC	1 cut(s)	238
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	1 cut(s)	61
TspGWI	ACGGA	1 cut(s)	458
TspRI	CASTG	1 cut(s)	468
VneI	GTGCAC	1 cut(s)	45
XceI	RCATGY	2 cut(s)	166, 286
XhoI	CTCGAG	2 cut(s)	330, 353
XspI	CTAG	1 cut(s)	296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.