Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000676

Physical Location & Seq

Genomic Coordinates Reverse (-)

22443684 .. 22444895

Gene Structure 1212 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G55360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGGAAGAAGAACTCAAGAACTTCATCAAGCTTTGGATTTCAGCAATAATCTCCATATCTTACTGTTACTACTTATCAACAGGAATCAAAGCTGGTGTTTTTCGATTACTCTCTGTTCTTCCTGTATGTGCTCTGTTTCTTGTTTTTCCTCTGTTTTTCTCCTATGTTCACTTCTCTGGTTGCATGGCTTTTTTCCTCTCATGGCTCGCAAATTTCAAACTCATCCTCTTCTCCTTCGATCAAGGTCCTCTTTCCCCACTTCCTCGAACTCTCTCCCGATTCATATGCATCACTTGCTTCCCCATCAAGCCTCAACAAAACCCTAATATTCAAAATTATAAAATCCCCATATGGCTTTTCGCCATTAAAGTTGTCATCTTTGTTGTCTTGTTACAAATGTATGAATACAAACAATATCTGTCTCCGGCTTTATTATTGGTTTTTAATTCTCTACATATATTCTTGGAGCTTGAGATTGTCTTTATGCTCGTCAAAGCATTGGTCTTTATCACTCTTGGCTGCGATCTAGAGCCACAGTCCAATGAACCATACTTAGCCACTTCTCTTCAAGACTTCTGGGGTCGTCGGTGGAACCTCATGGTCCCGGCGATTCTCCGGCCGGCTGTCTACCTCCCGGCGAGACGAATGGCCTGTCGGAAAGTTAACTCCGATCAGGCTATGTTCTTGGGAGTTTTCGCAGCGTTTCTCGTCTCCGGTGCGGTTCATGAGATGCTCTTCTTCTATCTTACCCGTGAGGTTCCTACAGGGGAAGTCACTTGGTTCTTTTTGTTACATGGAGTTTGCACGGTGGCGGAAGTGGCGGTGAAGAAGAGTACATTTGTGCGGCGATGGTGGAGAGTGAGTCCGACGGTGTCACGTCTTCTGACGGTCGGTTTTGTTGTTGTGACGAGTGGTTGGTTCTTTTTCCCTCTTATAAGGAGTGGCATCATCGAAAGACTCGCTAGCGAAGCCTTAATGTGCATTGATTTCGTCAAGCACAAGTTTCTTCTGTTACTTTTGGGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT_2

Protein Analysis

342

Amino Acids

39.41

Weight (kDa)

9.2

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT_2	PF13813	177 - 263	2.9e-17	Membrane bound O-acyl transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34490 AT1G34500 AT1G34520 AT5G51420 AT5G55320 AT5G55330 AT5G55340 AT5G55350 AT5G55360 AT5G55370 AT5G55380
fragaria_vesca	FvH4_1g25220 FvH4_2g09840
malus_domestica	MD03G1191100.v1.1 MD03G1191200.v1.1 MD11G1208100.v1.1
prunus_persica	Prupe.4G227200_v2.0.a1 Prupe.4G227400_v2.0.a1
pyrus_communis	pycom03g14430 pycom11g18170 pycom11g18340
rosa_chinensis	RchiOBHm_Chr2g0123061 RchiOBHm_Chr2g0123071 RchiOBHm_Chr2g0123131 RchiOBHm_Chr6g0266191 RchiOBHm_Chr6g0266201 RchiOBHm_Chr6g0266251 RchiOBHm_Chr6g0266341
rosa_laevigata	RLG00000014105 RLG00000014107 RLG00000018729 RLG00000018730 RLG00000023150
rosa_multiflora	Rmu_sc0000168.1_g000022 Rmu_sc0002235.1_g000075 Rmu_sc0003605.1_g000042 Rmu_sc0005573.1_g000002 Rmu_sc0005573.1_g000004 Rmu_sc0009036.1_g000008 Rmu_sc0009589.1_g000002
rosa_roxburghii	Rroxscaffold_2G00120900 Rroxscaffold_2G00120910 Rroxscaffold_6G00397020 Rroxscaffold_7G00201410 Rroxscaffold_7G00201760 Rroxscaffold_7G00201820
rosa_rugosa	Rorug02G0243000 Rorug02G0243100 Rorug03G0217500 Rorug06G0024700
rosa_samantha	Rh2AG302700 Rh2AG302800 Rh2BG310300 Rh2BG310400 Rh2BG310600 Rh2CG289000 Rh2CG289200 Rh2DG326800 Rh3BG302500 Rh3BG302800 Rh3BG303100 Rh3BG303200 Rh6AG145400 Rh6AG148500 Rh6BG146000 Rh6CG142600 Rh6DG130500
rosa_wichuraiana	Rw0G004920 Rw0G004930 Rw2G024180 Rw2G024190 Rw3G023820 Rw3G023880 Rw6G012560 Rw6G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	339, 935
AccI	GTMKAC	1 cut(s)	627
AciI	CCGC	4 cut(s)	719, 812, 821, 844
AcoI	YGGCCR	1 cut(s)	617
AcsI	RAATTY	1 cut(s)	211
AfaI	GTAC	1 cut(s)	835
AgsI	TTSAA	3 cut(s)	217, 332, 569
AjiI	CACGTC	1 cut(s)	878
AluBI	AGCT	3 cut(s)	31, 92, 469
AluI	AGCT	3 cut(s)	31, 92, 469
Alw21I	GWGCWC	1 cut(s)	133
Alw26I	GTCTC	3 cut(s)	426, 634, 715
AoxI	GGCC	2 cut(s)	617, 648
ApeKI	GCWGC	2 cut(s)	519, 698
ApoI	RAATTY	1 cut(s)	211
ArsI	GACNNNNNNTTYG	4 cut(s)	486, 518, 637, 669
AspS9I	GGNCC	2 cut(s)	245, 601
AsuC2I	CCSGG	2 cut(s)	605, 635
AsuHPI	GGTGA	1 cut(s)	835
AsuNHI	GCTAGC	1 cut(s)	962
AvaII	GGWCC	2 cut(s)	245, 601
BbsI	GAAGAC	1 cut(s)	872
Bbv12I	GWGCWC	1 cut(s)	133
BbvI	GCAGC	2 cut(s)	506, 710
BccI	CCATC	2 cut(s)	311, 843
BcgI	CGANNNNNNTGC	4 cut(s)	267, 301, 970, 1004
BcnI	CCSGG	2 cut(s)	605, 635
BcoDI	GTCTC	3 cut(s)	426, 634, 715
BfaI	CTAG	2 cut(s)	527, 963
BfmI	CTRYAG	1 cut(s)	762
BisI	GCNGC	3 cut(s)	520, 699, 845
BlsI	GCNGC	3 cut(s)	521, 700, 846
Bme1390I	CCNGG	2 cut(s)	605, 635
Bme18I	GGWCC	2 cut(s)	245, 601
BmgBI	CACGTC	1 cut(s)	878
BmgT120I	GGNCC	2 cut(s)	245, 601
BmiI	GGNNCC	3 cut(s)	593, 603, 759
BmrFI	CCNGG	2 cut(s)	605, 635
BmsI	GCATC	3 cut(s)	297, 720, 954
BmtI	GCTAGC	1 cut(s)	966
BpiI	GAAGAC	1 cut(s)	872
BpuEI	CTTGAG	1 cut(s)	491
BpuMI	CCSGG	2 cut(s)	605, 635
BsaWI	WCCGGW	1 cut(s)	713
BsaXI	ACNNNNNCTCC	2 cut(s)	847, 877
Bse118I	RCCGGY	1 cut(s)	619
BseGI	GGATG	1 cut(s)	222
BseX3I	CGGCCG	1 cut(s)	617
BseXI	GCAGC	2 cut(s)	506, 710
Bsh1285I	CGRYCG	2 cut(s)	620, 891
BshFI	GGCC	2 cut(s)	619, 650
BsiEI	CGRYCG	2 cut(s)	620, 891
BsiHKAI	GWGCWC	1 cut(s)	133
BsiSI	CCGG	6 cut(s)	425, 605, 616, 620, 635, 714
BslFI	GGGAC	1 cut(s)	587
BsmAI	GTCTC	3 cut(s)	426, 634, 715
BsmBI	CGTCTC	2 cut(s)	634, 715
BsmFI	GGGAC	1 cut(s)	587
BsnI	GGCC	2 cut(s)	619, 650
Bsp1286I	GDGCHC	1 cut(s)	133
Bsp143I	GATC	3 cut(s)	238, 523, 670
BspACI	CCGC	4 cut(s)	719, 812, 821, 844
BspANI	GGCC	2 cut(s)	619, 650
BspHI	TCATGA	1 cut(s)	724
BspLI	GGNNCC	3 cut(s)	593, 603, 759
BspOI	GCTAGC	1 cut(s)	966
BspQI	GCTCTTC	1 cut(s)	740
BsrFI	RCCGGY	1 cut(s)	619
BssAI	RCCGGY	1 cut(s)	619
BssMI	GATC	3 cut(s)	238, 523, 670
Bst4CI	ACNGT	5 cut(s)	65, 537, 808, 871, 889
Bst6I	CTCTTC	4 cut(s)	233, 570, 740, 824
BstAPI	GCANNNNNTGC	1 cut(s)	294
BstC8I	GCNNGC	3 cut(s)	207, 621, 964
BstDEI	CTNAG	1 cut(s)	553
BstF5I	GGATG	1 cut(s)	222
BstKTI	GATC	3 cut(s)	241, 526, 673
BstMAI	GTCTC	3 cut(s)	426, 634, 715
BstMBI	GATC	3 cut(s)	238, 523, 670
BstMCI	CGRYCG	2 cut(s)	620, 891
BstMWI	GCNNNNNNNGC	3 cut(s)	294, 818, 968
BstSCI	CCNGG	2 cut(s)	603, 633
BstSFI	CTRYAG	1 cut(s)	762
BstV1I	GCAGC	2 cut(s)	506, 710
BstV2I	GAAGAC	1 cut(s)	872
BstZI	CGGCCG	1 cut(s)	617
BsuRI	GGCC	2 cut(s)	619, 650
BtgZI	GCGATG	1 cut(s)	862
BtrI	CACGTC	1 cut(s)	878
BtsCI	GGATG	1 cut(s)	222
Cac8I	GCNNGC	3 cut(s)	207, 621, 964
CciI	TCATGA	1 cut(s)	724
Cfr10I	RCCGGY	1 cut(s)	619
Cfr13I	GGNCC	2 cut(s)	245, 601
Csp6I	GTAC	1 cut(s)	834
CviAII	CATG	5 cut(s)	184, 201, 598, 725, 794
CviQI	GTAC	1 cut(s)	834
DdeI	CTNAG	1 cut(s)	553
DpnI	GATC	3 cut(s)	240, 525, 672
DpnII	GATC	3 cut(s)	238, 523, 670
EaeI	YGGCCR	1 cut(s)	617
EagI	CGGCCG	1 cut(s)	617
Eam1104I	CTCTTC	4 cut(s)	233, 570, 740, 824
EarI	CTCTTC	4 cut(s)	233, 570, 740, 824
EciI	GGCGGA	1 cut(s)	827
EclXI	CGGCCG	1 cut(s)	617
Eco47I	GGWCC	2 cut(s)	245, 601
Eco52I	CGGCCG	1 cut(s)	617
EcoO109I	RGGNCCY	1 cut(s)	245
EcoT22I	ATGCAT	1 cut(s)	290
Esp3I	CGTCTC	2 cut(s)	634, 715
FaeI	CATG	5 cut(s)	187, 204, 601, 728, 797
FalI	AAGNNNNNCTT	2 cut(s)	234, 266
FaqI	GGGAC	1 cut(s)	587
FatI	CATG	5 cut(s)	183, 200, 597, 724, 793
FauNDI	CATATG	2 cut(s)	284, 350
FblI	GTMKAC	1 cut(s)	627
Fnu4HI	GCNGC	3 cut(s)	520, 699, 845
FokI	GGATG	1 cut(s)	209
Fsp4HI	GCNGC	3 cut(s)	520, 699, 845
FspBI	CTAG	2 cut(s)	527, 963
GluI	GCNGC	3 cut(s)	520, 699, 845
HaeIII	GGCC	2 cut(s)	619, 650
HapII	CCGG	6 cut(s)	425, 605, 616, 620, 635, 714
Hin1II	CATG	5 cut(s)	187, 204, 601, 728, 797
HincII	GTYRAC	1 cut(s)	664
HindII	GTYRAC	1 cut(s)	664
HindIII	AAGCTT	1 cut(s)	29
HinfI	GANTC	5 cut(s)	84, 279, 610, 862, 957
HpaI	GTTAAC	1 cut(s)	664
HpaII	CCGG	6 cut(s)	425, 605, 616, 620, 635, 714
HphI	GGTGA	1 cut(s)	835
Hpy166II	GTNNAC	3 cut(s)	169, 628, 664
Hpy188I	TCNGA	4 cut(s)	657, 670, 867, 885
Hpy188III	TCNNGA	5 cut(s)	16, 276, 527, 569, 725
Hpy8I	GTNNAC	3 cut(s)	169, 628, 664
Hpy99I	CGWCG	2 cut(s)	588, 871
HpyAV	CCTTC	1 cut(s)	244
HpyCH4III	ACNGT	5 cut(s)	65, 537, 808, 871, 889
HpyCH4IV	ACGT	1 cut(s)	877
HpyCH4V	TGCA	4 cut(s)	183, 288, 804, 981
HpyF10VI	GCNNNNNNNGC	3 cut(s)	294, 818, 968
HpyF3I	CTNAG	1 cut(s)	553
HpySE526I	ACGT	1 cut(s)	877
Hsp92II	CATG	5 cut(s)	187, 204, 601, 728, 797
KroI	GCCGGC	1 cut(s)	619
KroNI	GCCGGC	1 cut(s)	621
KspAI	GTTAAC	1 cut(s)	664
Kzo9I	GATC	3 cut(s)	238, 523, 670
LguI	GCTCTTC	1 cut(s)	740
LmnI	GCTCC	1 cut(s)	466
Lsp1109I	GCAGC	2 cut(s)	506, 710
LweI	GCATC	3 cut(s)	297, 720, 954
MaeI	CTAG	2 cut(s)	527, 963
MaeII	ACGT	1 cut(s)	877
MaeIII	GTNAC	7 cut(s)	65, 390, 772, 789, 873, 904, 1011
MalI	GATC	3 cut(s)	240, 525, 672
MboI	GATC	3 cut(s)	238, 523, 670
MhlI	GDGCHC	1 cut(s)	133
MluCI	AATT	3 cut(s)	211, 334, 445
MlyI	GAGTC	2 cut(s)	871, 951
MmeI	TCCRAC	2 cut(s)	635, 890
Mph1103I	ATGCAT	1 cut(s)	290
MroNI	GCCGGC	1 cut(s)	619
MseI	TTAA	5 cut(s)	366, 444, 663, 974, 1027
MspI	CCGG	6 cut(s)	425, 605, 616, 620, 635, 714
MspR9I	CCNGG	2 cut(s)	605, 635
MwoI	GCNNNNNNNGC	3 cut(s)	294, 818, 968
NaeI	GCCGGC	1 cut(s)	621
NciI	CCSGG	2 cut(s)	605, 635
NdeI	CATATG	2 cut(s)	284, 350
NdeII	GATC	3 cut(s)	238, 523, 670
NgoMIV	GCCGGC	1 cut(s)	619
NheI	GCTAGC	1 cut(s)	962
NlaIII	CATG	5 cut(s)	187, 204, 601, 728, 797
NlaIV	GGNNCC	3 cut(s)	593, 603, 759
NmuCI	GTSAC	3 cut(s)	772, 873, 904
NsiI	ATGCAT	1 cut(s)	290
PagI	TCATGA	1 cut(s)	724
PciSI	GCTCTTC	1 cut(s)	740
PdiI	GCCGGC	1 cut(s)	621
PfeI	GAWTC	3 cut(s)	84, 279, 610
PflFI	GACNNNGTC	1 cut(s)	871
PkrI	GCNGC	3 cut(s)	521, 700, 846
PleI	GAGTC	2 cut(s)	870, 951
PpsI	GAGTC	2 cut(s)	870, 951
PpuMI	RGGWCCY	1 cut(s)	245
PsiI	TTATAA	2 cut(s)	339, 935
Psp5II	RGGWCCY	1 cut(s)	245
PspN4I	GGNNCC	3 cut(s)	593, 603, 759
PspPI	GGNCC	2 cut(s)	245, 601
PspPPI	RGGWCCY	1 cut(s)	245
PsyI	GACNNNGTC	1 cut(s)	871
RsaI	GTAC	1 cut(s)	835
RsaNI	GTAC	1 cut(s)	834
SapI	GCTCTTC	1 cut(s)	740
SaqAI	TTAA	5 cut(s)	366, 444, 663, 974, 1027
SatI	GCNGC	3 cut(s)	520, 699, 845
Sau3AI	GATC	3 cut(s)	238, 523, 670
Sau96I	GGNCC	2 cut(s)	245, 601
SchI	GAGTC	2 cut(s)	871, 951
ScrFI	CCNGG	2 cut(s)	605, 635
SduI	GDGCHC	1 cut(s)	133
SetI	ASST	8 cut(s)	33, 94, 247, 471, 597, 633, 759, 880
SfaNI	GCATC	3 cut(s)	297, 720, 954
SfcI	CTRYAG	1 cut(s)	762
SinI	GGWCC	2 cut(s)	245, 601
SmlI	CTYRAG	2 cut(s)	14, 470
SmoI	CTYRAG	2 cut(s)	14, 470
Sse9I	AATT	3 cut(s)	211, 334, 445
SsiI	CCGC	4 cut(s)	719, 812, 821, 844
SspI	AATATT	1 cut(s)	328
SspMI	CTAG	2 cut(s)	527, 963
StyD4I	CCNGG	2 cut(s)	603, 633
TaaI	ACNGT	5 cut(s)	65, 537, 808, 871, 889
TaiI	ACGT	1 cut(s)	880
TaqI	TCGA	4 cut(s)	103, 237, 265, 951
TasI	AATT	3 cut(s)	211, 334, 445
TatI	WGTACW	1 cut(s)	833
TauI	GCSGC	1 cut(s)	847
TfiI	GAWTC	3 cut(s)	84, 279, 610
Tru1I	TTAA	5 cut(s)	366, 444, 663, 974, 1027
Tru9I	TTAA	5 cut(s)	366, 444, 663, 974, 1027
TseFI	GTSAC	3 cut(s)	772, 873, 904
TseI	GCWGC	2 cut(s)	519, 698
Tsp45I	GTSAC	3 cut(s)	772, 873, 904
TspDTI	ATGAA	5 cut(s)	13, 271, 417, 558, 713
Tth111I	GACNNNGTC	1 cut(s)	871
VpaK11BI	GGWCC	2 cut(s)	245, 601
XapI	RAATTY	1 cut(s)	211
XbaI	TCTAGA	1 cut(s)	526
XmiI	GTMKAC	1 cut(s)	627
XspI	CTAG	2 cut(s)	527, 963
Zsp2I	ATGCAT	1 cut(s)	290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.