Rh2CG289200

Long-chain-alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000676
Physical Location & Seq
Forward (+)
32598313 .. 32599392
1080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG289200.1

Sequence Viewer

Length: 1080 bp
ATGGAGGATGAGCTCAAGAACTTCATCAAGGTATGGATCACAACCATCTTATGTCTATCTTATTGCCATTACATAGTCTCCAGATTAATCCCTAAGGGCCTGCTTAGGCTCATTTCTCTCCTCCCTGTCTTCTACTTCTTCATCACCACCCCCCTAACTCTCCATTCCTTCCATCTCTGTGGATCCACAACCTTCTTCCTAGTCTGGCTTGGCATCTTCAAGCTCCTCCTCTTCTCCTTCAACCTTGGCCCTCTATCACCACCCCCAGCGTCACTCTTCCATTTCATCTCCATAGCTTGCCTCCCCATCAAAATCAAACCCCCAAATCCCAAAACCACCCAAAAACCCAGAAACCCAATTGGTCAAAGTGTCACACAGTGGCTGCCAAACAAGTCAATTGTGGTGGCTGTGAAGGCATTGCTTTTGGGTATGATCATTCATACCTACGAGTACAGACCACATTTGCACCCTTATGTGATCTTAGCCTTGTACTGTTGCCACATGTACCTGGCTCTAGAATTAATCCTGGTCCTGAGCGCGACTCCGGCTCGGGCTCTTTTCAGATTTGAGCTCGAGCCGCAGTCCAACGAGCCTTACCTCTCCACTTCGCTTCAAGACTTTTGGGGCCGTCGATGGAATCTAATGGTCACGAACATCCTGCGCCCAACGGTGTACGATCCCACCCGGCGCGTGTGTGCGCGTGTAGTTGGGAAACGGTGGGCAAGGCTGCCGGCTGTGATGGCCACCTTTGCGGTGTCCGGGTTAATGCACGAGGTTATTTATTATTATCTCACCCGCGTGCAGCCCACGTGGGAAGTGACGTGGTTTTTTGTGCTACATGGGGCTTGCGTGGTGGTTGAGGTGGAGGTCAAGAAGGCGATTACCGGCAGGTGGAGGTTGCACCCGGTGGTTTCGCGGCCGTTGACGTTGGTGTTCTTGGCTGTGACCGGCAACTGGCTGTTCTTTCCTCAGTTGCTCAGGAATGGTGTTGATGCAAAAGCTATAGGAGAGTATGCAATTATGGTGGATTTTGTCAAGGCTAACTTGCCTCATTTAAGTTATTGGCCCAACAAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT_2

Protein Analysis

359

Amino Acids

41.3

Weight (kDa)

9.69

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBOAT_2 PF13813 192 - 278 7.1e-20 Membrane bound O-acyl transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 879
Acc36I ACCTGC 1 cut(s) 879
AccII CGCG 5 cut(s) 539, 690, 700, 798, 916
AciI CCGC 4 cut(s) 578, 752, 796, 916
AclWI GGATC 4 cut(s) 44, 177, 190, 671
AcoI YGGCCR 2 cut(s) 741, 917
AcvI CACGTG 1 cut(s) 810
AdeI CACNNNGTG 2 cut(s) 378, 907
AfaI GTAC 4 cut(s) 452, 491, 506, 674
AfiI CCNNNNNNNGG 2 cut(s) 891, 954
AflIII ACRYGT 1 cut(s) 501
AgsI TTSAA 3 cut(s) 220, 241, 614
AjiI CACGTC 1 cut(s) 822
AjnI CCWGG 2 cut(s) 507, 525
AleI CACNNNNGTG 1 cut(s) 797
AluBI AGCT 6 cut(s) 13, 223, 296, 571, 1001, 1077
AluI AGCT 6 cut(s) 13, 223, 296, 571, 1001, 1077
Alw21I GWGCWC 2 cut(s) 15, 573
Alw26I GTCTC 1 cut(s) 82
AlwI GGATC 4 cut(s) 44, 177, 190, 671
AlwNI CAGNNNCTG 1 cut(s) 382
Ama87I CYCGRG 2 cut(s) 549, 572
AoxI GGCC 6 cut(s) 97, 247, 625, 741, 917, 1064
ApeKI GCWGC 3 cut(s) 382, 727, 802
AseI ATTAAT 2 cut(s) 86, 521
AspLEI GCGC 4 cut(s) 539, 663, 690, 700
AspS9I GGNCC 5 cut(s) 97, 248, 529, 625, 1065
AsuC2I CCSGG 3 cut(s) 685, 760, 905
AsuHPI GGTGA 3 cut(s) 136, 249, 784
AvaI CYCGRG 2 cut(s) 549, 572
AvaII GGWCC 1 cut(s) 529
AxyI CCTNAGG 1 cut(s) 93
BalI TGGCCA 1 cut(s) 743
BamHI GGATCC 1 cut(s) 182
BanII GRGCYC 3 cut(s) 15, 556, 573
BauI CACGAG 1 cut(s) 770
BbrPI CACGTG 1 cut(s) 810
BbsI GAAGAC 1 cut(s) 121
Bbv12I GWGCWC 2 cut(s) 15, 573
BbvI GCAGC 3 cut(s) 369, 714, 814
BccI CCATC 5 cut(s) 53, 180, 314, 627, 733
BceAI ACGGC 2 cut(s) 612, 904
BcgI CGANNNNNNTGC 2 cut(s) 640, 674
BciT130I CCWGG 2 cut(s) 509, 527
BclI TGATCA 1 cut(s) 432
BcnI CCSGG 3 cut(s) 685, 760, 905
BcoDI GTCTC 1 cut(s) 82
BfaI CTAG 2 cut(s) 200, 515
BfmI CTRYAG 1 cut(s) 1002
BfuAI ACCTGC 1 cut(s) 879
BisI GCNGC 5 cut(s) 383, 578, 728, 803, 917
BlsI GCNGC 5 cut(s) 384, 579, 729, 804, 918
Bme1390I CCNGG 5 cut(s) 509, 527, 685, 760, 905
Bme18I GGWCC 1 cut(s) 529
BmeT110I CYCGRG 2 cut(s) 549, 572
BmgBI CACGTC 1 cut(s) 822
BmgT120I GGNCC 5 cut(s) 97, 248, 529, 625, 1065
BmiI GGNNCC 2 cut(s) 184, 626
BmrFI CCNGG 5 cut(s) 509, 527, 685, 760, 905
BmsI GCATC 2 cut(s) 222, 982
BpiI GAAGAC 1 cut(s) 121
BplI GAGNNNNNCTC 2 cut(s) 526, 558
BpmI CTGGAG 1 cut(s) 64
Bpu10I CCTNAGC 3 cut(s) 104, 533, 977
BpuMI CCSGG 3 cut(s) 685, 760, 905
BsaAI YACGTR 1 cut(s) 810
BsaJI CCNNGG 1 cut(s) 244
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 2 cut(s) 891, 954
Bse118I RCCGGY 3 cut(s) 730, 884, 947
Bse1I ACTGG 1 cut(s) 959
Bse21I CCTNAGG 1 cut(s) 93
Bse3DI GCAATG 1 cut(s) 416
BseBI CCWGG 2 cut(s) 509, 527
BseDI CCNNGG 1 cut(s) 244
BseGI GGATG 2 cut(s) 13, 654
BseLI CCNNNNNNNGG 2 cut(s) 891, 954
BseMI GCAATG 1 cut(s) 416
BseMII CTCAG 3 cut(s) 524, 983, 991
BseNI ACTGG 1 cut(s) 959
BseRI GAGGAG 3 cut(s) 110, 215, 218
BseX3I CGGCCG 1 cut(s) 917
BseXI GCAGC 3 cut(s) 369, 714, 814
BseYI CCCAGC 1 cut(s) 265
BsgI GTGCAG 1 cut(s) 821
Bsh1236I CGCG 5 cut(s) 539, 690, 700, 798, 916
Bsh1285I CGRYCG 1 cut(s) 920
BshFI GGCC 6 cut(s) 99, 249, 627, 743, 919, 1066
BsiEI CGRYCG 1 cut(s) 920
BsiHKAI GWGCWC 2 cut(s) 15, 573
BsiHKCI CYCGRG 2 cut(s) 549, 572
BsiSI CCGG 7 cut(s) 545, 685, 731, 759, 885, 905, 948
BslI CCNNNNNNNGG 2 cut(s) 891, 954
BsmAI GTCTC 1 cut(s) 82
BsnI GGCC 6 cut(s) 99, 249, 627, 743, 919, 1066
BsoBI CYCGRG 2 cut(s) 549, 572
Bsp1286I GDGCHC 3 cut(s) 15, 556, 573
Bsp143I GATC 5 cut(s) 36, 182, 432, 477, 676
BspACI CCGC 4 cut(s) 578, 752, 796, 916
BspANI GGCC 6 cut(s) 99, 249, 627, 743, 919, 1066
BspCNI CTCAG 3 cut(s) 525, 982, 990
BspFNI CGCG 5 cut(s) 539, 690, 700, 798, 916
BspLI GGNNCC 2 cut(s) 184, 626
BspMI ACCTGC 1 cut(s) 879
BspPI GGATC 4 cut(s) 44, 177, 190, 671
BsrDI GCAATG 1 cut(s) 416
BsrFI RCCGGY 3 cut(s) 730, 884, 947
BsrI ACTGG 1 cut(s) 959
BssAI RCCGGY 3 cut(s) 730, 884, 947
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 5 cut(s) 36, 182, 432, 477, 676
BssSI CACGAG 1 cut(s) 770
BssT1I CCWWGG 1 cut(s) 244
Bst2BI CACGAG 1 cut(s) 770
Bst2UI CCWGG 2 cut(s) 509, 527
Bst4CI ACNGT 4 cut(s) 378, 494, 670, 717
Bst6I CTCTTC 2 cut(s) 236, 281
BstBAI YACGTR 1 cut(s) 810
BstC8I GCNNGC 5 cut(s) 101, 298, 732, 800, 847
BstDEI CTNAG 6 cut(s) 93, 104, 481, 533, 969, 977
BstF5I GGATG 2 cut(s) 13, 654
BstFNI CGCG 5 cut(s) 539, 690, 700, 798, 916
BstHHI GCGC 4 cut(s) 539, 663, 690, 700
BstKTI GATC 5 cut(s) 39, 185, 435, 480, 679
BstMAI GTCTC 1 cut(s) 82
BstMBI GATC 5 cut(s) 36, 182, 432, 477, 676
BstMCI CGRYCG 1 cut(s) 920
BstMWI GCNNNNNNNGC 5 cut(s) 413, 545, 577, 740, 749
BstNI CCWGG 2 cut(s) 509, 527
BstNSI RCATGY 1 cut(s) 505
BstSCI CCNGG 5 cut(s) 507, 525, 683, 758, 903
BstSFI CTRYAG 1 cut(s) 1002
BstUI CGCG 5 cut(s) 539, 690, 700, 798, 916
BstV1I GCAGC 3 cut(s) 369, 714, 814
BstV2I GAAGAC 1 cut(s) 121
BstX2I RGATCY 1 cut(s) 182
BstXI CCANNNNNNTGG 1 cut(s) 179
BstYI RGATCY 1 cut(s) 182
BstZI CGGCCG 1 cut(s) 917
Bsu36I CCTNAGG 1 cut(s) 93
BsuRI GGCC 6 cut(s) 99, 249, 627, 743, 919, 1066
BtrI CACGTC 1 cut(s) 822
BtsCI GGATG 2 cut(s) 13, 654
BtsIMutI CAGTG 1 cut(s) 383
BveI ACCTGC 1 cut(s) 879
Cac8I GCNNGC 5 cut(s) 101, 298, 732, 800, 847
CaiI CAGNNNCTG 1 cut(s) 382
CfoI GCGC 4 cut(s) 539, 663, 690, 700
Cfr10I RCCGGY 3 cut(s) 730, 884, 947
Cfr13I GGNCC 5 cut(s) 97, 248, 529, 625, 1065
CseI GACGC 1 cut(s) 258
Csp6I GTAC 4 cut(s) 451, 490, 505, 673
CspCI CAANNNNNGTGG 4 cut(s) 384, 419, 1005, 1040
CviAII CATG 2 cut(s) 502, 839
CviQI GTAC 4 cut(s) 451, 490, 505, 673
DdeI CTNAG 6 cut(s) 93, 104, 481, 533, 969, 977
DpnI GATC 5 cut(s) 38, 184, 434, 479, 678
DpnII GATC 5 cut(s) 36, 182, 432, 477, 676
DraIII CACNNNGTG 2 cut(s) 378, 907
EaeI YGGCCR 2 cut(s) 741, 917
EagI CGGCCG 1 cut(s) 917
Eam1104I CTCTTC 2 cut(s) 236, 281
EarI CTCTTC 2 cut(s) 236, 281
Ecl136II GAGCTC 2 cut(s) 13, 571
EclXI CGGCCG 1 cut(s) 917
Eco130I CCWWGG 1 cut(s) 244
Eco24I GRGCYC 3 cut(s) 15, 556, 573
Eco47I GGWCC 1 cut(s) 529
Eco52I CGGCCG 1 cut(s) 917
Eco53kI GAGCTC 2 cut(s) 13, 571
Eco72I CACGTG 1 cut(s) 810
Eco81I CCTNAGG 1 cut(s) 93
Eco88I CYCGRG 2 cut(s) 549, 572
EcoICRI GAGCTC 2 cut(s) 13, 571
EcoO109I RGGNCCY 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 507, 525
EcoT14I CCWWGG 1 cut(s) 244
EcoT38I GRGCYC 3 cut(s) 15, 556, 573
ErhI CCWWGG 1 cut(s) 244
FaeI CATG 2 cut(s) 505, 842
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FatI CATG 2 cut(s) 501, 838
FauI CCCGC 1 cut(s) 803
FbaI TGATCA 1 cut(s) 432
Fnu4HI GCNGC 5 cut(s) 383, 578, 728, 803, 917
FokI GGATG 2 cut(s) 20, 641
FriOI GRGCYC 3 cut(s) 15, 556, 573
Fsp4HI GCNGC 5 cut(s) 383, 578, 728, 803, 917
FspBI CTAG 2 cut(s) 200, 515
GlaI GCGC 4 cut(s) 538, 662, 689, 699
GluI GCNGC 5 cut(s) 383, 578, 728, 803, 917
GsaI CCCAGC 1 cut(s) 269
GsuI CTGGAG 1 cut(s) 64
HaeIII GGCC 6 cut(s) 99, 249, 627, 743, 919, 1066
HapII CCGG 7 cut(s) 545, 685, 731, 759, 885, 905, 948
HgaI GACGC 1 cut(s) 258
HhaI GCGC 4 cut(s) 539, 663, 690, 700
Hin1II CATG 2 cut(s) 505, 842
Hin6I GCGC 4 cut(s) 537, 661, 688, 698
HinP1I GCGC 4 cut(s) 537, 661, 688, 698
HincII GTYRAC 1 cut(s) 924
HindII GTYRAC 1 cut(s) 924
HinfI GANTC 2 cut(s) 541, 637
HpaII CCGG 7 cut(s) 545, 685, 731, 759, 885, 905, 948
HphI GGTGA 3 cut(s) 136, 249, 784
Hpy166II GTNNAC 2 cut(s) 673, 924
Hpy188I TCNGA 1 cut(s) 563
Hpy188III TCNNGA 8 cut(s) 16, 81, 515, 532, 614, 649, 871, 979
Hpy8I GTNNAC 2 cut(s) 673, 924
Hpy99I CGWCG 1 cut(s) 633
HpyAV CCTTC 5 cut(s) 178, 202, 247, 406, 868
HpyCH4III ACNGT 4 cut(s) 378, 494, 670, 717
HpyCH4IV ACGT 3 cut(s) 809, 821, 926
HpyCH4V TGCA 6 cut(s) 466, 769, 802, 901, 995, 1016
HpyF10VI GCNNNNNNNGC 5 cut(s) 413, 545, 577, 740, 749
HpyF3I CTNAG 6 cut(s) 93, 104, 481, 533, 969, 977
HpySE526I ACGT 3 cut(s) 809, 821, 926
Hsp92II CATG 2 cut(s) 505, 842
HspAI GCGC 4 cut(s) 537, 661, 688, 698
KroI GCCGGC 1 cut(s) 730
KroNI GCCGGC 1 cut(s) 732
Ksp22I TGATCA 1 cut(s) 432
Kzo9I GATC 5 cut(s) 36, 182, 432, 477, 676
LmnI GCTCC 1 cut(s) 228
Lsp1109I GCAGC 3 cut(s) 369, 714, 814
LweI GCATC 2 cut(s) 222, 982
MaeI CTAG 2 cut(s) 200, 515
MaeII ACGT 3 cut(s) 809, 821, 926
MaeIII GTNAC 5 cut(s) 270, 370, 646, 817, 943
MalI GATC 5 cut(s) 38, 184, 434, 479, 678
MboI GATC 5 cut(s) 36, 182, 432, 477, 676
MboII GAAGA 6 cut(s) 121, 130, 187, 208, 223, 268
MfeI CAATTG 2 cut(s) 357, 396
MflI RGATCY 1 cut(s) 182
MhlI GDGCHC 3 cut(s) 15, 556, 573
MlsI TGGCCA 1 cut(s) 743
MluCI AATT 4 cut(s) 357, 396, 518, 1017
MluNI TGGCCA 1 cut(s) 743
MlyI GAGTC 1 cut(s) 535
MmeI TCCRAC 1 cut(s) 609
Mox20I TGGCCA 1 cut(s) 743
MroNI GCCGGC 1 cut(s) 730
MscI TGGCCA 1 cut(s) 743
MseI TTAA 4 cut(s) 86, 521, 764, 1055
MslI CAYNNNNRTG 3 cut(s) 177, 471, 797
Msp20I TGGCCA 1 cut(s) 743
MspI CCGG 7 cut(s) 545, 685, 731, 759, 885, 905, 948
MspR9I CCNGG 5 cut(s) 509, 527, 685, 760, 905
MunI CAATTG 2 cut(s) 357, 396
MvaI CCWGG 2 cut(s) 509, 527
MvnI CGCG 5 cut(s) 539, 690, 700, 798, 916
MwoI GCNNNNNNNGC 5 cut(s) 413, 545, 577, 740, 749
NaeI GCCGGC 1 cut(s) 732
NciI CCSGG 3 cut(s) 685, 760, 905
NdeII GATC 5 cut(s) 36, 182, 432, 477, 676
NgoMIV GCCGGC 1 cut(s) 730
NlaIII CATG 2 cut(s) 505, 842
NlaIV GGNNCC 2 cut(s) 184, 626
NmuCI GTSAC 5 cut(s) 270, 370, 646, 817, 943
NspI RCATGY 1 cut(s) 505
OliI CACNNNNGTG 1 cut(s) 797
PaeR7I CTCGAG 1 cut(s) 572
PaqCI CACCTGC 1 cut(s) 879
PciI ACATGT 1 cut(s) 501
PdiI GCCGGC 1 cut(s) 732
PfeI GAWTC 1 cut(s) 637
PkrI GCNGC 5 cut(s) 384, 579, 729, 804, 918
PleI GAGTC 1 cut(s) 535
PmaCI CACGTG 1 cut(s) 810
PmlI CACGTG 1 cut(s) 810
PpsI GAGTC 1 cut(s) 535
Ppu21I YACGTR 1 cut(s) 810
PscI ACATGT 1 cut(s) 501
PshBI ATTAAT 2 cut(s) 86, 521
Psp124BI GAGCTC 2 cut(s) 15, 573
Psp6I CCWGG 2 cut(s) 507, 525
PspCI CACGTG 1 cut(s) 810
PspFI CCCAGC 1 cut(s) 265
PspGI CCWGG 2 cut(s) 507, 525
PspN4I GGNNCC 2 cut(s) 184, 626
PspPI GGNCC 5 cut(s) 97, 248, 529, 625, 1065
PspXI VCTCGAGB 1 cut(s) 572
PstNI CAGNNNCTG 1 cut(s) 382
PsuI RGATCY 1 cut(s) 182
RsaI GTAC 4 cut(s) 452, 491, 506, 674
RsaNI GTAC 4 cut(s) 451, 490, 505, 673
RseI CAYNNNNRTG 3 cut(s) 177, 471, 797
SacI GAGCTC 2 cut(s) 15, 573
SaqAI TTAA 4 cut(s) 86, 521, 764, 1055
SatI GCNGC 5 cut(s) 383, 578, 728, 803, 917
Sau3AI GATC 5 cut(s) 36, 182, 432, 477, 676
Sau96I GGNCC 5 cut(s) 97, 248, 529, 625, 1065
SchI GAGTC 1 cut(s) 535
ScrFI CCNGG 5 cut(s) 509, 527, 685, 760, 905
SduI GDGCHC 3 cut(s) 15, 556, 573
SfaNI GCATC 2 cut(s) 222, 982
SfcI CTRYAG 1 cut(s) 1002
Sfr274I CTCGAG 1 cut(s) 572
SinI GGWCC 1 cut(s) 529
SlaI CTCGAG 1 cut(s) 572
SmiMI CAYNNNNRTG 3 cut(s) 177, 471, 797
SmlI CTYRAG 2 cut(s) 14, 572
SmoI CTYRAG 2 cut(s) 14, 572
Sse9I AATT 4 cut(s) 357, 396, 518, 1017
SsiI CCGC 4 cut(s) 578, 752, 796, 916
SspMI CTAG 2 cut(s) 200, 515
SstI GAGCTC 2 cut(s) 15, 573
StyD4I CCNGG 5 cut(s) 507, 525, 683, 758, 903
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 4 cut(s) 378, 494, 670, 717
TaiI ACGT 3 cut(s) 812, 824, 929
TaqI TCGA 2 cut(s) 573, 631
TasI AATT 4 cut(s) 357, 396, 518, 1017
TatI WGTACW 2 cut(s) 450, 489
TauI GCSGC 2 cut(s) 580, 919
TfiI GAWTC 1 cut(s) 637
Tru1I TTAA 4 cut(s) 86, 521, 764, 1055
Tru9I TTAA 4 cut(s) 86, 521, 764, 1055
TscAI CASTG 1 cut(s) 383
TseFI GTSAC 5 cut(s) 270, 370, 646, 817, 943
TseI GCWGC 3 cut(s) 382, 727, 802
Tsp45I GTSAC 5 cut(s) 270, 370, 646, 817, 943
TspDTI ATGAA 4 cut(s) 13, 130, 274, 428
TspRI CASTG 1 cut(s) 383
VpaK11BI GGWCC 1 cut(s) 529
VspI ATTAAT 2 cut(s) 86, 521
XbaI TCTAGA 1 cut(s) 514
XceI RCATGY 1 cut(s) 505
XhoI CTCGAG 1 cut(s) 572
XspI CTAG 2 cut(s) 200, 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.