AT5G55320

Membrane bound O-acyl transferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000676
Physical Location & Seq
Reverse (-)
22435607 .. 22436943
1337 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G55320.1

Sequence Viewer

Length: 1020 bp
ATGGAGGAAGAAATCAAGAGCTTGATCAATGTAGGGTTTTTAACAATTATCTCAGTATCTTACTGCTACTGCTTACCACCAAGAATCAAATCTGGTGTTCTTCGATTACTCTCTATTTTTCCGGTCTGTGTTTTGTTAGTTGTTCTTCCTCTGTTCTTCTCCTTTTCAATTTTCACTTCCACCACAGCGTTTTTCTTATCAGCTATTGCCAATTCAAGACTCATCCTCTTTTCCTTTGATCAAGGTCCTCTTTTTCCACTACCTTCAAATCTATTCAGATTTACCTGCTTTACTTGCTTCCCAATCCAGCGTCAACAAAACCCTAAATCTCAAGATCATTTGTCCACGTATGTTTTTCCCGTTAAAATTGCAATCTTTGTTGTGTTGTTATATGTGCATAACGACATACAAAACCTTCCTCGTACTTTTCTATTGTGTCTCCATCCACTGTATGTATATTTGTTACTTGAGATTCTCTTAACGCTCCTTAGAATTCTAATGACTATCATTCTTGGTTGTGACCTAGAGCCACATTTTCACGAACCATACTTAGCCACATCTCTTCAAGACTTTTGGGGTCGCAGGTGGAACCTCATAGTCTCGGCAAGTCTTCGGGCAATCGTCTACACTCCTGTGCGGCGTGTCTGCCAACGAGTAATGAGCTCTGATTATGCAATGTTGATTGGTGTTTTTGCGACGTTTGTAACCTCTGGTGTGGCTCATGAAGTGGTTTTCTTTTATATAACCCGTGCGATGCCTACAGGGGAAGTCGCTTTATTCTTTCTCTTACATGGAGTTTGCACGGTGGCGGAAGTGGCAGCGAAGAGGACGGCGTTTGTACGGAGGTGGCCGGTGAGACCAGTCGTATCTTGGATGTTCACGATAGCGTTTGTAAATGTGACCGCTGGTTGGCTGTTTTTTCCTCAGTTGATTCGGAACAACCTGGGGGAGAGATGCTCCAATGAAATCTCCTTGCTCATTGATTTCTTCAGAAGCAAGTTATTTTATTTTCCCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT_2

Protein Analysis

339

Amino Acids

38.98

Weight (kDa)

9.15

Isoelectric Point (pI)

51.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBOAT_2 PF13813 176 - 262 9e-18 Membrane bound O-acyl transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 573
Acc36I ACCTGC 2 cut(s) 293, 573
AccI GTMKAC 1 cut(s) 624
AciI CCGC 3 cut(s) 637, 809, 903
AcoI YGGCCR 1 cut(s) 848
AcsI RAATTY 1 cut(s) 492
AcuI CTGAAG 1 cut(s) 973
AfaI GTAC 2 cut(s) 424, 840
AfiI CCNNNNNNNGG 1 cut(s) 909
AgsI TTSAA 4 cut(s) 168, 216, 267, 566
AjnI CCWGG 1 cut(s) 942
AleI CACNNNNGTG 1 cut(s) 632
AluBI AGCT 3 cut(s) 21, 203, 663
AluI AGCT 3 cut(s) 21, 203, 663
Alw21I GWGCWC 1 cut(s) 665
Alw26I GTCTC 3 cut(s) 443, 604, 850
AoxI GGCC 1 cut(s) 848
ApeKI GCWGC 1 cut(s) 818
ApoI RAATTY 1 cut(s) 492
AspS9I GGNCC 1 cut(s) 245
AsuHPI GGTGA 1 cut(s) 865
AvaII GGWCC 1 cut(s) 245
BanII GRGCYC 1 cut(s) 665
BbsI GAAGAC 1 cut(s) 602
Bbv12I GWGCWC 1 cut(s) 665
BbvI GCAGC 1 cut(s) 830
BccI CCATC 1 cut(s) 450
BceAI ACGGC 1 cut(s) 846
BciT130I CCWGG 1 cut(s) 944
BclI TGATCA 2 cut(s) 24, 238
BcoDI GTCTC 3 cut(s) 443, 604, 850
BfaI CTAG 1 cut(s) 524
BfmI CTRYAG 1 cut(s) 759
BfuAI ACCTGC 2 cut(s) 293, 573
BisI GCNGC 2 cut(s) 638, 819
BlsI GCNGC 2 cut(s) 639, 820
Bme1390I CCNGG 1 cut(s) 944
Bme18I GGWCC 1 cut(s) 245
BmgT120I GGNCC 1 cut(s) 245
BmiI GGNNCC 1 cut(s) 590
BmrFI CCNGG 1 cut(s) 944
BmrI ACTGGG 1 cut(s) 1009
BmsI GCATC 2 cut(s) 744, 944
BmuI ACTGGG 1 cut(s) 1009
BpiI GAAGAC 1 cut(s) 602
BplI GAGNNNNNCTC 2 cut(s) 941, 973
BpuEI CTTGAG 2 cut(s) 315, 488
BsaAI YACGTR 1 cut(s) 348
BsaI GGTCTC 1 cut(s) 850
BsaJI CCNNGG 1 cut(s) 943
BsaWI WCCGGW 1 cut(s) 121
Bsc4I CCNNNNNNNGG 1 cut(s) 909
Bse118I RCCGGY 1 cut(s) 850
Bse1I ACTGG 2 cut(s) 860, 1015
Bse3DI GCAATG 1 cut(s) 681
BseBI CCWGG 1 cut(s) 944
BseDI CCNNGG 1 cut(s) 943
BseGI GGATG 3 cut(s) 222, 442, 879
BseLI CCNNNNNNNGG 1 cut(s) 909
BseMI GCAATG 1 cut(s) 681
BseMII CTCAG 2 cut(s) 66, 938
BseNI ACTGG 2 cut(s) 860, 1015
BseXI GCAGC 1 cut(s) 830
BshFI GGCC 1 cut(s) 850
BsiHKAI GWGCWC 1 cut(s) 665
BsiSI CCGG 2 cut(s) 122, 851
BslI CCNNNNNNNGG 1 cut(s) 909
BsmAI GTCTC 3 cut(s) 443, 604, 850
BsnI GGCC 1 cut(s) 850
Bso31I GGTCTC 1 cut(s) 850
Bsp1286I GDGCHC 1 cut(s) 665
Bsp143I GATC 3 cut(s) 24, 238, 334
BspACI CCGC 3 cut(s) 637, 809, 903
BspANI GGCC 1 cut(s) 850
BspCNI CTCAG 2 cut(s) 65, 937
BspHI TCATGA 1 cut(s) 721
BspLI GGNNCC 1 cut(s) 590
BspMI ACCTGC 2 cut(s) 293, 573
BspTNI GGTCTC 1 cut(s) 850
BsrDI GCAATG 1 cut(s) 681
BsrFI RCCGGY 1 cut(s) 850
BsrI ACTGG 2 cut(s) 860, 1015
BssAI RCCGGY 1 cut(s) 850
BssECI CCNNGG 1 cut(s) 943
BssMI GATC 3 cut(s) 24, 238, 334
Bst2UI CCWGG 1 cut(s) 944
Bst4CI ACNGT 2 cut(s) 450, 805
Bst6I CTCTTC 2 cut(s) 567, 818
BstBAI YACGTR 1 cut(s) 348
BstDEI CTNAG 4 cut(s) 52, 488, 550, 924
BstF5I GGATG 3 cut(s) 222, 442, 879
BstKTI GATC 3 cut(s) 27, 241, 337
BstMAI GTCTC 3 cut(s) 443, 604, 850
BstMBI GATC 3 cut(s) 24, 238, 334
BstMWI GCNNNNNNNGC 2 cut(s) 294, 815
BstNI CCWGG 1 cut(s) 944
BstSCI CCNGG 1 cut(s) 942
BstSFI CTRYAG 1 cut(s) 759
BstV1I GCAGC 1 cut(s) 830
BstV2I GAAGAC 1 cut(s) 602
BsuRI GGCC 1 cut(s) 850
BtgZI GCGATG 1 cut(s) 767
BtsCI GGATG 3 cut(s) 222, 442, 879
BtsIMutI CAGTG 1 cut(s) 446
BveI ACCTGC 2 cut(s) 293, 573
CciI TCATGA 1 cut(s) 721
Cfr10I RCCGGY 1 cut(s) 850
Cfr13I GGNCC 1 cut(s) 245
CseI GACGC 1 cut(s) 299
Csp6I GTAC 2 cut(s) 423, 839
CviAII CATG 2 cut(s) 722, 791
CviJI RGCY 8 cut(s) 21, 203, 529, 554, 663, 719, 850, 913
CviKI_1 RGCY 8 cut(s) 21, 203, 529, 554, 663, 719, 850, 913
CviQI GTAC 2 cut(s) 423, 839
DdeI CTNAG 4 cut(s) 52, 488, 550, 924
DpnI GATC 3 cut(s) 26, 240, 336
DpnII GATC 3 cut(s) 24, 238, 334
EaeI YGGCCR 1 cut(s) 848
Eam1104I CTCTTC 2 cut(s) 567, 818
EarI CTCTTC 2 cut(s) 567, 818
EciI GGCGGA 1 cut(s) 824
Ecl136II GAGCTC 1 cut(s) 663
Eco24I GRGCYC 1 cut(s) 665
Eco31I GGTCTC 1 cut(s) 850
Eco47I GGWCC 1 cut(s) 245
Eco53kI GAGCTC 1 cut(s) 663
Eco57I CTGAAG 1 cut(s) 973
EcoICRI GAGCTC 1 cut(s) 663
EcoO109I RGGNCCY 1 cut(s) 245
EcoRI GAATTC 1 cut(s) 492
EcoRII CCWGG 1 cut(s) 942
EcoT38I GRGCYC 1 cut(s) 665
FaeI CATG 2 cut(s) 725, 794
FalI AAGNNNNNCTT 2 cut(s) 234, 266
FatI CATG 2 cut(s) 721, 790
FbaI TGATCA 2 cut(s) 24, 238
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 2 cut(s) 638, 819
FokI GGATG 3 cut(s) 209, 429, 886
FriOI GRGCYC 1 cut(s) 665
Fsp4HI GCNGC 2 cut(s) 638, 819
FspBI CTAG 1 cut(s) 524
GluI GCNGC 2 cut(s) 638, 819
HaeIII GGCC 1 cut(s) 850
HapII CCGG 2 cut(s) 122, 851
HgaI GACGC 1 cut(s) 299
Hin1II CATG 2 cut(s) 725, 794
HincII GTYRAC 1 cut(s) 314
HindII GTYRAC 1 cut(s) 314
HinfI GANTC 4 cut(s) 84, 219, 472, 931
HpaII CCGG 2 cut(s) 122, 851
HphI GGTGA 1 cut(s) 865
Hpy166II GTNNAC 4 cut(s) 314, 345, 625, 879
Hpy188I TCNGA 4 cut(s) 278, 667, 936, 992
Hpy188III TCNNGA 7 cut(s) 16, 216, 332, 539, 566, 722, 880
Hpy8I GTNNAC 4 cut(s) 314, 345, 625, 879
Hpy99I CGWCG 1 cut(s) 700
HpyAV CCTTC 2 cut(s) 273, 425
HpyCH4III ACNGT 2 cut(s) 450, 805
HpyCH4IV ACGT 2 cut(s) 347, 698
HpyCH4V TGCA 4 cut(s) 371, 397, 674, 801
HpyF10VI GCNNNNNNNGC 2 cut(s) 294, 815
HpyF3I CTNAG 4 cut(s) 52, 488, 550, 924
HpySE526I ACGT 2 cut(s) 347, 698
Hsp92II CATG 2 cut(s) 725, 794
Ksp22I TGATCA 2 cut(s) 24, 238
Kzo9I GATC 3 cut(s) 24, 238, 334
LmnI GCTCC 2 cut(s) 489, 962
Lsp1109I GCAGC 1 cut(s) 830
LweI GCATC 2 cut(s) 744, 944
MaeI CTAG 1 cut(s) 524
MaeII ACGT 2 cut(s) 347, 698
MaeIII GTNAC 4 cut(s) 462, 518, 703, 898
MalI GATC 3 cut(s) 26, 240, 336
MboI GATC 3 cut(s) 24, 238, 334
MboII GAAGA 8 cut(s) 20, 92, 137, 148, 554, 602, 835, 979
MhlI GDGCHC 1 cut(s) 665
MluCI AATT 5 cut(s) 45, 168, 211, 366, 492
MlyI GAGTC 1 cut(s) 213
MnlI CCTC 9 cut(s) 159, 236, 258, 429, 602, 718, 819, 837, 933
MseI TTAA 3 cut(s) 41, 363, 479
MslI CAYNNNNRTG 1 cut(s) 632
MspA1I CMGCKG 1 cut(s) 905
MspI CCGG 2 cut(s) 122, 851
MspR9I CCNGG 1 cut(s) 944
MvaI CCWGG 1 cut(s) 944
MwoI GCNNNNNNNGC 2 cut(s) 294, 815
NdeII GATC 3 cut(s) 24, 238, 334
NlaIII CATG 2 cut(s) 725, 794
NlaIV GGNNCC 1 cut(s) 590
NmeAIII GCCGAG 1 cut(s) 581
NmuCI GTSAC 2 cut(s) 518, 898
OliI CACNNNNGTG 1 cut(s) 632
PagI TCATGA 1 cut(s) 721
PaqCI CACCTGC 1 cut(s) 573
PfeI GAWTC 3 cut(s) 84, 472, 931
PkrI GCNGC 2 cut(s) 639, 820
PleI GAGTC 1 cut(s) 213
PpsI GAGTC 1 cut(s) 213
Ppu21I YACGTR 1 cut(s) 348
PpuMI RGGWCCY 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 665
Psp5II RGGWCCY 1 cut(s) 245
Psp6I CCWGG 1 cut(s) 942
PspGI CCWGG 1 cut(s) 942
PspN4I GGNNCC 1 cut(s) 590
PspPI GGNCC 1 cut(s) 245
PspPPI RGGWCCY 1 cut(s) 245
RsaI GTAC 2 cut(s) 424, 840
RsaNI GTAC 2 cut(s) 423, 839
RseI CAYNNNNRTG 1 cut(s) 632
SacI GAGCTC 1 cut(s) 665
SaqAI TTAA 3 cut(s) 41, 363, 479
SatI GCNGC 2 cut(s) 638, 819
Sau3AI GATC 3 cut(s) 24, 238, 334
Sau96I GGNCC 1 cut(s) 245
SchI GAGTC 1 cut(s) 213
ScrFI CCNGG 1 cut(s) 944
SduI GDGCHC 1 cut(s) 665
SfaNI GCATC 2 cut(s) 744, 944
SfcI CTRYAG 1 cut(s) 759
SinI GGWCC 1 cut(s) 245
SmiMI CAYNNNNRTG 1 cut(s) 632
SmlI CTYRAG 2 cut(s) 330, 467
SmoI CTYRAG 2 cut(s) 330, 467
Sse9I AATT 5 cut(s) 45, 168, 211, 366, 492
SsiI CCGC 3 cut(s) 637, 809, 903
SspMI CTAG 1 cut(s) 524
SstI GAGCTC 1 cut(s) 665
StyD4I CCNGG 1 cut(s) 942
TaaI ACNGT 2 cut(s) 450, 805
TaiI ACGT 2 cut(s) 350, 701
TaqI TCGA 1 cut(s) 103
TasI AATT 5 cut(s) 45, 168, 211, 366, 492
TauI GCSGC 1 cut(s) 640
TfiI GAWTC 3 cut(s) 84, 472, 931
Tru1I TTAA 3 cut(s) 41, 363, 479
Tru9I TTAA 3 cut(s) 41, 363, 479
TscAI CASTG 1 cut(s) 453
TseFI GTSAC 2 cut(s) 518, 898
TseI GCWGC 1 cut(s) 818
Tsp45I GTSAC 2 cut(s) 518, 898
TspDTI ATGAA 2 cut(s) 738, 978
TspGWI ACGGA 1 cut(s) 856
TspRI CASTG 1 cut(s) 453
VpaK11BI GGWCC 1 cut(s) 245
XapI RAATTY 1 cut(s) 492
XcmI CCANNNNNNNNNTGG 1 cut(s) 867
XmiI GTMKAC 1 cut(s) 624
XspI CTAG 1 cut(s) 524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.