AT5G51420

Membrane bound O-acyl transferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000676
Physical Location & Seq
Reverse (-)
20885419 .. 20886762
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G51420.1

Sequence Viewer

Length: 1308 bp
ATGGAGGAAGAACTCAAGAACTTGATCAAGGTTTCGGTTTCTGTAATAATCTCCATATCTTACTGTTACTACGTACCAACCAGAATCAAACCTGGTATCTTTAGATTTCTCTCTGTTCTTCCAATTTGTGCTCTGTTTCGTGTTCTTCCTCTGTTTTTCGCCTCTGTTCACCTCTCTGGTTACACAGCGCTTTTCATCTCATGGCTCGCCAATTTCAAACTCATACTCTTCTCCTTCAATCAAGGCCCACTTTTTCCACTTCCCTCAAATCTCACCCGATTCATCTGCTTCGCTTGCTTCCCCATCAAGCTTCAACAAAACCCTAAGCGCCGAGACTATTTCTTCCAATGGGAATACCCCATTGAAGTTTTGTTTAGTAACCAATTCGTGACTAAAGTTGTAATCTTGAGTGTAGTGTTACATATGTATAATCACATACAACATATATATCCCATTGTGCTATTTGTTCTCTATCCACTCCATCTATACTTGGTACTTGAGATTCTCTTAAAGCTCTTCAACGCTTTCTTCTCTATAGCTCTTGATTGCGAACTCGAGCCACAGCTGAATGAACCATACTTGGCCTATTCTCTTCGAGACTTCTGGGGTCACTGGTGGACACTCATGCTCCCGACGATCCTCCTGCCAGACGTCTACGCTAGGATGCGGCGAATCACTGAAGGGAAAATGAACTCCGAGAATGCTCTGTACTTGGGAGTTTTTGTCACATTCCTTGTCTCCGGTGCACTTCACGAGTTTCTCTTCTTCTATATAACTCGTGAGCGGCCTACTGGAGAGGTTACTCTGTTCTTCGTGTTACATGGGGTTTGCATTGTGGCGTACGACGCCAGGTTAAAGAAGAAGATTGCGCGGTGGATAGGGTTTGAATTTTGCCCGTGTTTGATATTACAAGTGATGGTTATGGGGTTTGTCGTTGTGACTGCTGGTTGGTTGTTTTTCCCTCCTCTTGTCAGGACCGGCAAGATTCAGAGATTCGCTAACGAAGCCTTGCTCTTCATTGGTTTCGTGCGCAACTTGTTTAACGAATCCTTGTTCTTCATGCGTAAGTTTTTTAACGAAGCCTTGTTCTTCACTGGTTTCGTCATGCGCAAGTTGTTTAACGGAGCCTTGTTTTTCATTGGTTTCGTCAAGCTCAAGTTGTTTAACGAATCCTCCTTGTTCTTCATCATGCGCAAGTTGTTTAACGAAGCCATGTTCTTCATTGGTTTCGTCATACGCAAGTTGTTTAACGAAGCCATGTTCTTCATTGGTTTCGTCAAGCTCAAGTTGTTTACTTTTGGCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT_2

Protein Analysis

435

Amino Acids

51.29

Weight (kDa)

9.5

Isoelectric Point (pI)

29.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBOAT_2 PF13813 186 - 272 1.2e-15 Membrane bound O-acyl transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 654
Acc16I TGCGCA 3 cut(s) 1031, 1109, 1193
AccBSI CCGCTC 1 cut(s) 784
AccI GTMKAC 1 cut(s) 654
AccII CGCG 1 cut(s) 871
AciI CCGC 3 cut(s) 667, 784, 871
AclWI GGATC 1 cut(s) 631
AcsI RAATTY 1 cut(s) 887
AcuI CTGAAG 1 cut(s) 699
AcyI GRCGYC 2 cut(s) 651, 846
AfaI GTAC 4 cut(s) 75, 495, 710, 842
AfeI AGCGCT 1 cut(s) 189
AgsI TTSAA 6 cut(s) 217, 238, 314, 365, 520, 887
AjnI CCWGG 2 cut(s) 91, 848
AluBI AGCT 6 cut(s) 310, 514, 539, 565, 1153, 1282
AluI AGCT 6 cut(s) 310, 514, 539, 565, 1153, 1282
Alw21I GWGCWC 2 cut(s) 133, 748
Alw26I GTCTC 3 cut(s) 327, 591, 742
Alw44I GTGCAC 1 cut(s) 744
AlwI GGATC 1 cut(s) 631
Ama87I CYCGRG 1 cut(s) 554
Aor51HI AGCGCT 1 cut(s) 189
AoxI GGCC 3 cut(s) 244, 582, 785
ApaLI GTGCAC 1 cut(s) 744
ApoI RAATTY 1 cut(s) 887
AspLEI GCGC 6 cut(s) 190, 330, 871, 1032, 1110, 1194
AspS9I GGNCC 2 cut(s) 245, 975
AsuHPI GGTGA 2 cut(s) 161, 265
AvaI CYCGRG 1 cut(s) 554
AvaII GGWCC 1 cut(s) 975
BaeGI GKGCMC 1 cut(s) 748
BauI CACGAG 2 cut(s) 752, 777
Bbv12I GWGCWC 2 cut(s) 133, 748
BccI CCATC 3 cut(s) 311, 489, 910
BcgI CGANNNNNNTGC 4 cut(s) 267, 301, 625, 659
BciT130I CCWGG 2 cut(s) 93, 850
BclI TGATCA 1 cut(s) 24
BcoDI GTCTC 3 cut(s) 327, 591, 742
BfaI CTAG 1 cut(s) 660
BfmI CTRYAG 1 cut(s) 534
BfoI RGCGCY 2 cut(s) 191, 331
BisI GCNGC 2 cut(s) 668, 785
BlsI GCNGC 2 cut(s) 669, 786
Bme1390I CCNGG 2 cut(s) 93, 850
Bme18I GGWCC 1 cut(s) 975
BmeT110I CYCGRG 1 cut(s) 554
BmgT120I GGNCC 2 cut(s) 245, 975
BmiI GGNNCC 1 cut(s) 1126
BmrFI CCNGG 2 cut(s) 93, 850
BmsI GCATC 1 cut(s) 654
BpmI CTGGAG 1 cut(s) 813
Bpu10I CCTNAGC 1 cut(s) 324
BpuEI CTTGAG 4 cut(s) 427, 518, 1139, 1268
BsaAI YACGTR 1 cut(s) 73
BsaHI GRCGYC 2 cut(s) 651, 846
BsaWI WCCGGW 1 cut(s) 740
BsaXI ACNNNNNCTCC 6 cut(s) 612, 642, 708, 738, 1157, 1187
Bse118I RCCGGY 1 cut(s) 977
Bse1I ACTGG 3 cut(s) 617, 796, 1099
BseBI CCWGG 2 cut(s) 93, 850
BseGI GGATG 1 cut(s) 669
BseNI ACTGG 3 cut(s) 617, 796, 1099
BseRI GAGGAG 1 cut(s) 954
BseSI GKGCMC 1 cut(s) 748
Bsh1236I CGCG 1 cut(s) 871
BshFI GGCC 3 cut(s) 246, 584, 787
BsiHKAI GWGCWC 2 cut(s) 133, 748
BsiHKCI CYCGRG 1 cut(s) 554
BsiSI CCGG 2 cut(s) 741, 978
BsiWI CGTACG 1 cut(s) 840
BsmAI GTCTC 3 cut(s) 327, 591, 742
BsmI GAATGC 1 cut(s) 706
BsnI GGCC 3 cut(s) 246, 584, 787
BsoBI CYCGRG 1 cut(s) 554
Bsp1286I GDGCHC 2 cut(s) 133, 748
Bsp143I GATC 2 cut(s) 24, 636
BspACI CCGC 3 cut(s) 667, 784, 871
BspANI GGCC 3 cut(s) 246, 584, 787
BspFNI CGCG 1 cut(s) 871
BspLI GGNNCC 1 cut(s) 1126
BspPI GGATC 1 cut(s) 631
BspQI GCTCTTC 2 cut(s) 521, 1019
BsrBI CCGCTC 1 cut(s) 784
BsrFI RCCGGY 1 cut(s) 977
BsrI ACTGG 3 cut(s) 617, 796, 1099
BssAI RCCGGY 1 cut(s) 977
BssMI GATC 2 cut(s) 24, 636
BssNI GRCGYC 2 cut(s) 651, 846
BssSI CACGAG 2 cut(s) 752, 777
Bst2BI CACGAG 2 cut(s) 752, 777
Bst2UI CCWGG 2 cut(s) 93, 850
Bst4CI ACNGT 1 cut(s) 65
Bst6I CTCTTC 5 cut(s) 233, 521, 597, 767, 1019
BstACI GRCGYC 2 cut(s) 651, 846
BstBAI YACGTR 1 cut(s) 73
BstC8I GCNNGC 2 cut(s) 207, 295
BstDEI CTNAG 1 cut(s) 324
BstF5I GGATG 1 cut(s) 669
BstFNI CGCG 1 cut(s) 871
BstH2I RGCGCY 2 cut(s) 191, 331
BstHHI GCGC 6 cut(s) 190, 330, 871, 1032, 1110, 1194
BstKTI GATC 2 cut(s) 27, 639
BstMAI GTCTC 3 cut(s) 327, 591, 742
BstMBI GATC 2 cut(s) 24, 636
BstMWI GCNNNNNNNGC 3 cut(s) 294, 845, 1004
BstNI CCWGG 2 cut(s) 93, 850
BstSCI CCNGG 2 cut(s) 91, 848
BstSFI CTRYAG 1 cut(s) 534
BstSLI GKGCMC 1 cut(s) 748
BstSNI TACGTA 1 cut(s) 73
BstUI CGCG 1 cut(s) 871
BsuRI GGCC 3 cut(s) 246, 584, 787
BtsCI GGATG 1 cut(s) 669
BtsIMutI CAGTG 3 cut(s) 610, 675, 1092
Cac8I GCNNGC 2 cut(s) 207, 295
CfoI GCGC 6 cut(s) 190, 330, 871, 1032, 1110, 1194
Cfr10I RCCGGY 1 cut(s) 977
Cfr13I GGNCC 2 cut(s) 245, 975
CseI GACGC 1 cut(s) 854
CsiI ACCWGGT 1 cut(s) 91
Csp6I GTAC 4 cut(s) 74, 494, 709, 841
CviAII CATG 8 cut(s) 201, 625, 821, 1060, 1105, 1189, 1213, 1258
CviQI GTAC 4 cut(s) 74, 494, 709, 841
DdeI CTNAG 1 cut(s) 324
DpnI GATC 2 cut(s) 26, 638
DpnII GATC 2 cut(s) 24, 636
Eam1104I CTCTTC 5 cut(s) 233, 521, 597, 767, 1019
EarI CTCTTC 5 cut(s) 233, 521, 597, 767, 1019
Eco105I TACGTA 1 cut(s) 73
Eco47I GGWCC 1 cut(s) 975
Eco47III AGCGCT 1 cut(s) 189
Eco57I CTGAAG 1 cut(s) 699
Eco88I CYCGRG 1 cut(s) 554
EcoRII CCWGG 2 cut(s) 91, 848
FaeI CATG 8 cut(s) 204, 628, 824, 1063, 1108, 1192, 1216, 1261
FalI AAGNNNNNCTT 2 cut(s) 234, 266
FatI CATG 8 cut(s) 200, 624, 820, 1059, 1104, 1188, 1212, 1257
FauNDI CATATG 1 cut(s) 423
FbaI TGATCA 1 cut(s) 24
FblI GTMKAC 1 cut(s) 654
Fnu4HI GCNGC 2 cut(s) 668, 785
FokI GGATG 1 cut(s) 676
Fsp4HI GCNGC 2 cut(s) 668, 785
FspBI CTAG 1 cut(s) 660
FspI TGCGCA 3 cut(s) 1031, 1109, 1193
GlaI GCGC 6 cut(s) 189, 329, 870, 1031, 1109, 1193
GluI GCNGC 2 cut(s) 668, 785
GsuI CTGGAG 1 cut(s) 813
HaeII RGCGCY 2 cut(s) 191, 331
HaeIII GGCC 3 cut(s) 246, 584, 787
HapII CCGG 2 cut(s) 741, 978
HgaI GACGC 1 cut(s) 854
HhaI GCGC 6 cut(s) 190, 330, 871, 1032, 1110, 1194
Hin1I GRCGYC 2 cut(s) 651, 846
Hin1II CATG 8 cut(s) 204, 628, 824, 1063, 1108, 1192, 1216, 1261
Hin6I GCGC 6 cut(s) 188, 328, 869, 1030, 1108, 1192
HinP1I GCGC 6 cut(s) 188, 328, 869, 1030, 1108, 1192
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 8 cut(s) 84, 279, 502, 672, 985, 993, 1046, 1169
HpaII CCGG 2 cut(s) 741, 978
HphI GGTGA 2 cut(s) 161, 265
Hpy166II GTNNAC 5 cut(s) 169, 618, 655, 746, 1293
Hpy188I TCNGA 2 cut(s) 697, 990
Hpy188III TCNNGA 9 cut(s) 16, 388, 406, 542, 596, 631, 752, 779, 973
Hpy8I GTNNAC 5 cut(s) 169, 618, 655, 746, 1293
Hpy99I CGWCG 2 cut(s) 637, 848
HpyAV CCTTC 2 cut(s) 244, 674
HpyCH4III ACNGT 1 cut(s) 65
HpyCH4IV ACGT 2 cut(s) 72, 651
HpyCH4V TGCA 2 cut(s) 746, 831
HpyF10VI GCNNNNNNNGC 3 cut(s) 294, 845, 1004
HpyF3I CTNAG 1 cut(s) 324
HpySE526I ACGT 2 cut(s) 72, 651
Hsp92I GRCGYC 2 cut(s) 651, 846
Hsp92II CATG 8 cut(s) 204, 628, 824, 1063, 1108, 1192, 1216, 1261
HspAI GCGC 6 cut(s) 188, 328, 869, 1030, 1108, 1192
Ksp22I TGATCA 1 cut(s) 24
Kzo9I GATC 2 cut(s) 24, 636
LguI GCTCTTC 2 cut(s) 521, 1019
LmnI GCTCC 2 cut(s) 633, 1124
LweI GCATC 1 cut(s) 654
MabI ACCWGGT 1 cut(s) 91
MaeI CTAG 1 cut(s) 660
MaeII ACGT 2 cut(s) 72, 651
MalI GATC 2 cut(s) 26, 638
MbiI CCGCTC 1 cut(s) 784
MboI GATC 2 cut(s) 24, 636
MhlI GDGCHC 2 cut(s) 133, 748
MluCI AATT 4 cut(s) 123, 211, 383, 887
MnlI CCTC 9 cut(s) 159, 172, 182, 274, 650, 790, 972, 975, 1183
MseI TTAA 8 cut(s) 509, 854, 1041, 1074, 1119, 1164, 1203, 1248
MspA1I CMGCKG 1 cut(s) 565
MspI CCGG 2 cut(s) 741, 978
MspR9I CCNGG 2 cut(s) 93, 850
Mva1269I GAATGC 1 cut(s) 706
MvaI CCWGG 2 cut(s) 93, 850
MvnI CGCG 1 cut(s) 871
MwoI GCNNNNNNNGC 3 cut(s) 294, 845, 1004
NdeI CATATG 1 cut(s) 423
NdeII GATC 2 cut(s) 24, 636
NlaIII CATG 8 cut(s) 204, 628, 824, 1063, 1108, 1192, 1216, 1261
NlaIV GGNNCC 1 cut(s) 1126
NmeAIII GCCGAG 1 cut(s) 356
NmuCI GTSAC 4 cut(s) 388, 608, 724, 937
NsbI TGCGCA 3 cut(s) 1031, 1109, 1193
PaeR7I CTCGAG 1 cut(s) 554
PciSI GCTCTTC 2 cut(s) 521, 1019
PctI GAATGC 1 cut(s) 706
PfeI GAWTC 8 cut(s) 84, 279, 502, 672, 985, 993, 1046, 1169
Pfl23II CGTACG 1 cut(s) 840
PkrI GCNGC 2 cut(s) 669, 786
Ppu21I YACGTR 1 cut(s) 73
Psp6I CCWGG 2 cut(s) 91, 848
PspGI CCWGG 2 cut(s) 91, 848
PspLI CGTACG 1 cut(s) 840
PspN4I GGNNCC 1 cut(s) 1126
PspPI GGNCC 2 cut(s) 245, 975
PspXI VCTCGAGB 1 cut(s) 554
PvuII CAGCTG 1 cut(s) 565
RsaI GTAC 4 cut(s) 75, 495, 710, 842
RsaNI GTAC 4 cut(s) 74, 494, 709, 841
SapI GCTCTTC 2 cut(s) 521, 1019
SaqAI TTAA 8 cut(s) 509, 854, 1041, 1074, 1119, 1164, 1203, 1248
SatI GCNGC 2 cut(s) 668, 785
Sau3AI GATC 2 cut(s) 24, 636
Sau96I GGNCC 2 cut(s) 245, 975
ScrFI CCNGG 2 cut(s) 93, 850
SduI GDGCHC 2 cut(s) 133, 748
SexAI ACCWGGT 1 cut(s) 91
SfaNI GCATC 1 cut(s) 654
SfcI CTRYAG 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 554
SinI GGWCC 1 cut(s) 975
SlaI CTCGAG 1 cut(s) 554
SmlI CTYRAG 6 cut(s) 14, 406, 497, 554, 1154, 1283
SmoI CTYRAG 6 cut(s) 14, 406, 497, 554, 1154, 1283
SnaBI TACGTA 1 cut(s) 73
Sse9I AATT 4 cut(s) 123, 211, 383, 887
SsiI CCGC 3 cut(s) 667, 784, 871
SspMI CTAG 1 cut(s) 660
StyD4I CCNGG 2 cut(s) 91, 848
TaaI ACNGT 1 cut(s) 65
TaiI ACGT 2 cut(s) 75, 654
TaqI TCGA 2 cut(s) 555, 595
TasI AATT 4 cut(s) 123, 211, 383, 887
TatI WGTACW 1 cut(s) 708
TauI GCSGC 2 cut(s) 670, 787
TfiI GAWTC 8 cut(s) 84, 279, 502, 672, 985, 993, 1046, 1169
Tru1I TTAA 8 cut(s) 509, 854, 1041, 1074, 1119, 1164, 1203, 1248
Tru9I TTAA 8 cut(s) 509, 854, 1041, 1074, 1119, 1164, 1203, 1248
TscAI CASTG 3 cut(s) 617, 682, 1099
TseFI GTSAC 4 cut(s) 388, 608, 724, 937
Tsp45I GTSAC 4 cut(s) 388, 608, 724, 937
TspGWI ACGGA 1 cut(s) 1137
TspRI CASTG 3 cut(s) 617, 682, 1099
VneI GTGCAC 1 cut(s) 744
VpaK11BI GGWCC 1 cut(s) 975
XapI RAATTY 1 cut(s) 887
XhoI CTCGAG 1 cut(s) 554
XmiI GTMKAC 1 cut(s) 654
XspI CTAG 1 cut(s) 660
ZraI GACGTC 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.