Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000676

Physical Location & Seq

Genomic Coordinates Reverse (-)

22437471 .. 22438884

Gene Structure 1414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G55330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGGAGGAAGAACTCAAGTTATTCATCCAAGTATGGGTTTCTGCAATCATTTCAGTAACTTATTGTTACTACTTAACACCCAAAATCAAAACCAGTCTTCTTCGATTACTATCTGTTCTTCCTGTTTGTGTTTTGTTTCTTATTATTCCTATCTTTTTCTCCACTGTTCATTCCTCTTTCACTATTGCATTTTTCCTCTCAGGTCTTGCAGTTCCAAAACTCATCCTCTTTGCATTAGAAAAAGGTCCTCTTTTTCCACTTCCTCCTAATCTCCCTCATTTCGTCTGCTTTGCTTGCTTCCCCATCAAGCTTCAAAAAAAACCTAACCCTGAAAATACTAACCATTTCCCCAAATGGGTTTTTGCCCTGAAAGTTTTCATCTTTGGTGCCTTGTTACTACAAGCGTATCATTACAAACAATTTCTATCTACGAATTTTCTATTGGGTCTCTATGCTCTGCATATATACTTGGAGCTTGAGATTTCCTTAACCTTGATAAAATTTCTCGTCAGTATCACTCTTGGGTGTGACCTCGAGCCACAATTCAACGAACCATACTTAGCCACCTCTCTACATGACTTCTGGGGTCACCGATGGAACCTCATGGTCTCGAAGATTCTCTGGCTCGCAGTGTACAACCCCATACGGCAATGGCGAGCCAAGAGCTCCGAGTGGGATCGGTTCTTCGCGATTTTCGCCACGTTCCTCGTCTCTGGTGTGGCTCACGAGATTCTCTACTTCTATTTGACACGTGAGAAGCCTACATGGGAGGTGACTTGGTTCTTTGTGTTACATGGGTTTTGCATGGCGGCTGAAGTGGCACTGAAGAGGAAGACGAAGTTGGTGCAGCGGTGGCCGGTGAATCCGGCAGTGTCGAGACTGCTTACGGTGGGGTTTGTGTTTGTGACTGGTGTTTGGCTATTTTCCCCCCAGCCTATTAGGCACGGCTTGATGGAGAGGTTCATCAATGAAGACTTGTTTCTAATTGATTTCTTTAATCGTAAGTTATATATCCTCTTAGGGTTGTTTACGAGTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT_2

Protein Analysis

346

Amino Acids

40.39

Weight (kDa)

9.29

Isoelectric Point (pI)

34.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT_2	PF13813	179 - 263	2.4e-17	Membrane bound O-acyl transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34490 AT1G34500 AT1G34520 AT5G51420 AT5G55320 AT5G55330 AT5G55340 AT5G55350 AT5G55360 AT5G55370 AT5G55380
fragaria_vesca	FvH4_1g25220 FvH4_2g09840
malus_domestica	MD03G1191100.v1.1 MD03G1191200.v1.1 MD11G1208100.v1.1
prunus_persica	Prupe.4G227200_v2.0.a1 Prupe.4G227400_v2.0.a1
pyrus_communis	pycom03g14430 pycom11g18170 pycom11g18340
rosa_chinensis	RchiOBHm_Chr2g0123061 RchiOBHm_Chr2g0123071 RchiOBHm_Chr2g0123131 RchiOBHm_Chr6g0266191 RchiOBHm_Chr6g0266201 RchiOBHm_Chr6g0266251 RchiOBHm_Chr6g0266341
rosa_laevigata	RLG00000014105 RLG00000014107 RLG00000018729 RLG00000018730 RLG00000023150
rosa_multiflora	Rmu_sc0000168.1_g000022 Rmu_sc0002235.1_g000075 Rmu_sc0003605.1_g000042 Rmu_sc0005573.1_g000002 Rmu_sc0005573.1_g000004 Rmu_sc0009036.1_g000008 Rmu_sc0009589.1_g000002
rosa_roxburghii	Rroxscaffold_2G00120900 Rroxscaffold_2G00120910 Rroxscaffold_6G00397020 Rroxscaffold_7G00201410 Rroxscaffold_7G00201760 Rroxscaffold_7G00201820
rosa_rugosa	Rorug02G0243000 Rorug02G0243100 Rorug03G0217500 Rorug06G0024700
rosa_samantha	Rh2AG302700 Rh2AG302800 Rh2BG310300 Rh2BG310400 Rh2BG310600 Rh2CG289000 Rh2CG289200 Rh2DG326800 Rh3BG302500 Rh3BG302800 Rh3BG303100 Rh3BG303200 Rh6AG145400 Rh6AG148500 Rh6BG146000 Rh6CG142600 Rh6DG130500
rosa_wichuraiana	Rw0G004920 Rw0G004930 Rw2G024180 Rw2G024190 Rw3G023820 Rw3G023880 Rw6G012560 Rw6G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	386
AccII	CGCG	1 cut(s)	689
AciI	CCGC	2 cut(s)	809, 850
AclWI	GGATC	1 cut(s)	684
AcoI	YGGCCR	1 cut(s)	854
AcsI	RAATTY	2 cut(s)	433, 500
AcuI	CTGAAG	2 cut(s)	834, 845
AcvI	CACGTG	1 cut(s)	752
AfaI	GTAC	1 cut(s)	635
AfiI	CCNNNNNNNGG	2 cut(s)	34, 355
AflIII	ACRYGT	1 cut(s)	749
AgsI	TTSAA	2 cut(s)	314, 547
AjuI	GAANNNNNNNTTGG	4 cut(s)	425, 457, 824, 856
AluBI	AGCT	3 cut(s)	310, 475, 666
AluI	AGCT	3 cut(s)	310, 475, 666
Alw21I	GWGCWC	1 cut(s)	668
Alw26I	GTCTC	4 cut(s)	452, 613, 715, 871
AlwI	GGATC	1 cut(s)	684
Ama87I	CYCGRG	1 cut(s)	533
AoxI	GGCC	1 cut(s)	854
ApeKI	GCWGC	1 cut(s)	847
ApoI	RAATTY	2 cut(s)	433, 500
Asp700I	GAANNNNTTC	1 cut(s)	374
AspS9I	GGNCC	1 cut(s)	245
AsuHPI	GGTGA	3 cut(s)	581, 784, 871
AvaI	CYCGRG	1 cut(s)	533
AvaII	GGWCC	1 cut(s)	245
BaeI	ACNNNNGTAYC	2 cut(s)	389, 422
BanI	GGYRCC	1 cut(s)	386
BanII	GRGCYC	1 cut(s)	668
BauI	CACGAG	1 cut(s)	725
BbrPI	CACGTG	1 cut(s)	752
BbsI	GAAGAC	3 cut(s)	89, 839, 978
Bbv12I	GWGCWC	1 cut(s)	668
BbvI	GCAGC	1 cut(s)	859
BccI	CCATC	3 cut(s)	311, 588, 946
BceAI	ACGGC	2 cut(s)	662, 961
BcgI	CGANNNNNNTGC	2 cut(s)	826, 860
BcoDI	GTCTC	4 cut(s)	452, 613, 715, 871
BglI	GCCNNNNNGGC	1 cut(s)	940
BisI	GCNGC	2 cut(s)	810, 848
BlsI	GCNGC	2 cut(s)	811, 849
Bme18I	GGWCC	1 cut(s)	245
BmeT110I	CYCGRG	1 cut(s)	533
BmgT120I	GGNCC	1 cut(s)	245
BmiI	GGNNCC	2 cut(s)	388, 599
BpiI	GAAGAC	3 cut(s)	89, 839, 978
BpuEI	CTTGAG	1 cut(s)	497
BsaAI	YACGTR	1 cut(s)	752
BsaBI	GATNNNNATC	1 cut(s)	109
BsaI	GGTCTC	2 cut(s)	452, 613
Bsc4I	CCNNNNNNNGG	2 cut(s)	34, 355
Bse118I	RCCGGY	1 cut(s)	856
Bse1I	ACTGG	2 cut(s)	93, 913
Bse3DI	GCAATG	1 cut(s)	656
Bse8I	GATNNNNATC	1 cut(s)	109
BseGI	GGATG	2 cut(s)	24, 222
BseJI	GATNNNNATC	1 cut(s)	109
BseLI	CCNNNNNNNGG	2 cut(s)	34, 355
BseMI	GCAATG	1 cut(s)	656
BseMII	CTCAG	1 cut(s)	213
BseNI	ACTGG	2 cut(s)	93, 913
BseXI	GCAGC	1 cut(s)	859
BseYI	CCCAGC	1 cut(s)	930
BsgI	GTGCAG	1 cut(s)	866
Bsh1236I	CGCG	1 cut(s)	689
BshFI	GGCC	1 cut(s)	856
BshNI	GGYRCC	1 cut(s)	386
BsiHKAI	GWGCWC	1 cut(s)	668
BsiHKCI	CYCGRG	1 cut(s)	533
BsiSI	CCGG	2 cut(s)	857, 866
BslI	CCNNNNNNNGG	2 cut(s)	34, 355
BsmAI	GTCTC	4 cut(s)	452, 613, 715, 871
BsmBI	CGTCTC	1 cut(s)	715
BsnI	GGCC	1 cut(s)	856
Bso31I	GGTCTC	2 cut(s)	452, 613
BsoBI	CYCGRG	1 cut(s)	533
Bsp1286I	GDGCHC	1 cut(s)	668
Bsp1407I	TGTACA	1 cut(s)	633
Bsp143I	GATC	1 cut(s)	676
Bsp68I	TCGCGA	1 cut(s)	689
BspACI	CCGC	2 cut(s)	809, 850
BspANI	GGCC	1 cut(s)	856
BspCNI	CTCAG	1 cut(s)	212
BspFNI	CGCG	1 cut(s)	689
BspLI	GGNNCC	2 cut(s)	388, 599
BspPI	GGATC	1 cut(s)	684
BspT107I	GGYRCC	1 cut(s)	386
BspTNI	GGTCTC	2 cut(s)	452, 613
BsrDI	GCAATG	1 cut(s)	656
BsrFI	RCCGGY	1 cut(s)	856
BsrGI	TGTACA	1 cut(s)	633
BsrI	ACTGG	2 cut(s)	93, 913
BssAI	RCCGGY	1 cut(s)	856
BssMI	GATC	1 cut(s)	676
BssSI	CACGAG	1 cut(s)	725
Bst2BI	CACGAG	1 cut(s)	725
Bst4CI	ACNGT	2 cut(s)	166, 889
Bst6I	CTCTTC	1 cut(s)	821
BstAUI	TGTACA	1 cut(s)	633
BstBAI	YACGTR	1 cut(s)	752
BstC8I	GCNNGC	3 cut(s)	295, 627, 657
BstDEI	CTNAG	3 cut(s)	199, 559, 1018
BstEII	GGTNACC	1 cut(s)	587
BstF5I	GGATG	2 cut(s)	24, 222
BstFNI	CGCG	1 cut(s)	689
BstKTI	GATC	1 cut(s)	679
BstMAI	GTCTC	4 cut(s)	452, 613, 715, 871
BstMBI	GATC	1 cut(s)	676
BstMWI	GCNNNNNNNGC	5 cut(s)	294, 695, 818, 853, 940
BstPI	GGTNACC	1 cut(s)	587
BstUI	CGCG	1 cut(s)	689
BstV1I	GCAGC	1 cut(s)	859
BstV2I	GAAGAC	3 cut(s)	89, 839, 978
BsuRI	GGCC	1 cut(s)	856
BtsCI	GGATG	2 cut(s)	24, 222
BtsI	GCAGTG	2 cut(s)	636, 876
BtsIMutI	CAGTG	4 cut(s)	162, 636, 821, 876
BtuMI	TCGCGA	1 cut(s)	689
Cac8I	GCNNGC	3 cut(s)	295, 627, 657
Cfr10I	RCCGGY	1 cut(s)	856
Cfr13I	GGNCC	1 cut(s)	245
Csp6I	GTAC	1 cut(s)	634
CviAII	CATG	5 cut(s)	575, 604, 765, 794, 805
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	3 cut(s)	199, 559, 1018
DpnI	GATC	1 cut(s)	678
DpnII	GATC	1 cut(s)	676
EaeI	YGGCCR	1 cut(s)	854
Eam1104I	CTCTTC	1 cut(s)	821
EarI	CTCTTC	1 cut(s)	821
Ecl136II	GAGCTC	1 cut(s)	666
Eco24I	GRGCYC	1 cut(s)	668
Eco31I	GGTCTC	2 cut(s)	452, 613
Eco47I	GGWCC	1 cut(s)	245
Eco53kI	GAGCTC	1 cut(s)	666
Eco57I	CTGAAG	2 cut(s)	834, 845
Eco72I	CACGTG	1 cut(s)	752
Eco88I	CYCGRG	1 cut(s)	533
Eco91I	GGTNACC	1 cut(s)	587
EcoICRI	GAGCTC	1 cut(s)	666
EcoO109I	RGGNCCY	1 cut(s)	245
EcoO65I	GGTNACC	1 cut(s)	587
EcoT38I	GRGCYC	1 cut(s)	668
Esp3I	CGTCTC	1 cut(s)	715
FaeI	CATG	5 cut(s)	578, 607, 768, 797, 808
FalI	AAGNNNNNCTT	2 cut(s)	234, 266
FatI	CATG	5 cut(s)	574, 603, 764, 793, 804
Fnu4HI	GCNGC	2 cut(s)	810, 848
FokI	GGATG	2 cut(s)	11, 209
FriOI	GRGCYC	1 cut(s)	668
Fsp4HI	GCNGC	2 cut(s)	810, 848
GluI	GCNGC	2 cut(s)	810, 848
GsaI	CCCAGC	1 cut(s)	934
HaeIII	GGCC	1 cut(s)	856
HapII	CCGG	2 cut(s)	857, 866
Hin1II	CATG	5 cut(s)	578, 607, 768, 797, 808
HindIII	AAGCTT	1 cut(s)	308
HinfI	GANTC	4 cut(s)	616, 730, 862, 1033
HpaII	CCGG	2 cut(s)	857, 866
HphI	GGTGA	3 cut(s)	581, 784, 871
Hpy166II	GTNNAC	2 cut(s)	634, 1029
Hpy188I	TCNGA	1 cut(s)	670
Hpy188III	TCNNGA	4 cut(s)	610, 688, 725, 876
Hpy8I	GTNNAC	2 cut(s)	634, 1029
HpyCH4III	ACNGT	2 cut(s)	166, 889
HpyCH4IV	ACGT	2 cut(s)	701, 751
HpyCH4V	TGCA	7 cut(s)	44, 188, 209, 233, 460, 804, 847
HpyF10VI	GCNNNNNNNGC	5 cut(s)	294, 695, 818, 853, 940
HpyF3I	CTNAG	3 cut(s)	199, 559, 1018
HpySE526I	ACGT	2 cut(s)	701, 751
Hsp92II	CATG	5 cut(s)	578, 607, 768, 797, 808
Kzo9I	GATC	1 cut(s)	676
LmnI	GCTCC	2 cut(s)	472, 671
Lsp1109I	GCAGC	1 cut(s)	859
MaeII	ACGT	2 cut(s)	701, 751
MaeIII	GTNAC	8 cut(s)	55, 65, 393, 527, 587, 772, 789, 904
MalI	GATC	1 cut(s)	678
MboI	GATC	1 cut(s)	676
MboII	GAAGA	9 cut(s)	20, 89, 92, 110, 625, 676, 838, 844, 983
MhlI	GDGCHC	1 cut(s)	668
MluCI	AATT	5 cut(s)	419, 433, 500, 542, 984
MroXI	GAANNNNTTC	1 cut(s)	374
MseI	TTAA	4 cut(s)	74, 488, 996, 1039
MspA1I	CMGCKG	1 cut(s)	850
MspI	CCGG	2 cut(s)	857, 866
MvnI	CGCG	1 cut(s)	689
MwoI	GCNNNNNNNGC	5 cut(s)	294, 695, 818, 853, 940
NdeII	GATC	1 cut(s)	676
NlaIII	CATG	5 cut(s)	578, 607, 768, 797, 808
NlaIV	GGNNCC	2 cut(s)	388, 599
NmuCI	GTSAC	4 cut(s)	527, 587, 772, 904
NruI	TCGCGA	1 cut(s)	689
PaeR7I	CTCGAG	1 cut(s)	533
PcsI	WCGNNNNNNNCGW	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	374
PfeI	GAWTC	3 cut(s)	616, 730, 862
PkrI	GCNGC	2 cut(s)	811, 849
PmaCI	CACGTG	1 cut(s)	752
PmlI	CACGTG	1 cut(s)	752
Ppu21I	YACGTR	1 cut(s)	752
PpuMI	RGGWCCY	1 cut(s)	245
Psp124BI	GAGCTC	1 cut(s)	668
Psp5II	RGGWCCY	1 cut(s)	245
PspCI	CACGTG	1 cut(s)	752
PspEI	GGTNACC	1 cut(s)	587
PspFI	CCCAGC	1 cut(s)	930
PspN4I	GGNNCC	2 cut(s)	388, 599
PspPI	GGNCC	1 cut(s)	245
PspPPI	RGGWCCY	1 cut(s)	245
PspXI	VCTCGAGB	1 cut(s)	533
RruI	TCGCGA	1 cut(s)	689
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
SacI	GAGCTC	1 cut(s)	668
SaqAI	TTAA	4 cut(s)	74, 488, 996, 1039
SatI	GCNGC	2 cut(s)	810, 848
Sau3AI	GATC	1 cut(s)	676
Sau96I	GGNCC	1 cut(s)	245
SduI	GDGCHC	1 cut(s)	668
Sfr274I	CTCGAG	1 cut(s)	533
SinI	GGWCC	1 cut(s)	245
SlaI	CTCGAG	1 cut(s)	533
SmlI	CTYRAG	3 cut(s)	14, 476, 533
SmoI	CTYRAG	3 cut(s)	14, 476, 533
Sse9I	AATT	5 cut(s)	419, 433, 500, 542, 984
SsiI	CCGC	2 cut(s)	809, 850
SstI	GAGCTC	1 cut(s)	668
TaaI	ACNGT	2 cut(s)	166, 889
TaiI	ACGT	2 cut(s)	704, 754
TaqI	TCGA	4 cut(s)	103, 534, 611, 875
TasI	AATT	5 cut(s)	419, 433, 500, 542, 984
TatI	WGTACW	1 cut(s)	633
TauI	GCSGC	1 cut(s)	812
TfiI	GAWTC	3 cut(s)	616, 730, 862
Tru1I	TTAA	4 cut(s)	74, 488, 996, 1039
Tru9I	TTAA	4 cut(s)	74, 488, 996, 1039
TscAI	CASTG	4 cut(s)	169, 636, 828, 876
TseFI	GTSAC	4 cut(s)	527, 587, 772, 904
TseI	GCWGC	1 cut(s)	847
Tsp45I	GTSAC	4 cut(s)	527, 587, 772, 904
TspDTI	ATGAA	5 cut(s)	13, 158, 367, 952, 984
TspRI	CASTG	4 cut(s)	169, 636, 828, 876
VpaK11BI	GGWCC	1 cut(s)	245
XapI	RAATTY	2 cut(s)	433, 500
XhoI	CTCGAG	1 cut(s)	533
XmnI	GAANNNNTTC	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.