Prupe.4G227400_v2.0.a1

Long-chain-alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000676
Physical Location & Seq
Reverse (-)
14483481 .. 14484808
1328 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G227400.1

Sequence Viewer

Length: 1149 bp
ATGGATGGTGAAATCAACAACTTCATCAAGGTATGGATCCTAACCAACACCTCTCTATGTTATTGTTACTACATAGCAGCTAAAATCCCAAAGGGCATCATCAGGCTCATCTCTCTCCTCCCCATCTTCTACATCTTCATCATCCTCCCCTTGAATCTCCACTCATTCCATCTCTGTGGGCCCACAACTTTCTTTCTGGTTTGGCTTGGCATCTTTAAGCTCCTCCTCTTCTCCTTTAACCTTGGCCCTTTATCCCCAACCCCACCAACACTAGTTCAATTCATCTCCATAGCTTGCCTTCCCATTAAAATCAAACAAAACCCACCTCAAAAATCACCCCAAAACACAGATCAAAACCCTCCAACCCCTCAAAATAACAAAAACCCATCTCACCAAACCACCCCAAAACCCAAGAAATCTGTGAACCCAATTGATCAAACCCTCACAAATGTGCCCAATAAGTCAATTTTGCTGGCCATAAAAGCCTTGCTTTTGGCTTTGGTCATTAGGACATATGAATATAGACCACATTTACACCCGTACATAATCTTGGCTCTGTACTGCTGCCACATGTACCTTGGCATAGAACTTGTGCTGGCCTTGAGCGCCGTCCCAGCTCGAGCCATACTTGGATTTGAGCTCGAGCCGCAGTTCACCGAGCCCTACCTTTCCACTTCGCTTCAAGACTTTTGGGGCCGCAGGTGGAACCTCATGGTCACCAACATCCTACGCCCCGTCGCCTACGACCCCGTACGCCGTATATCTATGCGTATACTTGGGCCTCGGTGGTCCCGGTTCTTGGCTGTGATGTCCACTTTTGCGGTCTCAGGTTTAATGCACGAGGCGATATACTATTATCTCACACGTGTGTCTCCCACGTGGGAAGTGACGTGGTTCTTCGTCCTACATGGCGTTTGCGTGGCGGTTGAGGTAGAGATGAAGAAGGCGGCGACTGACAGGTGGCGGTTGCACCCGATGGTTTCGAGGCCGTTGACAATAGTGTTTTTGGGTGTGACAGGCAATTGGCTGTTCTTTCCTCAGTTGCTGAGAAATGGTGTGGATTTGAAGGCTATAGATGAGTATGGGATTATGATAGATTTTGTCAAGGCTCATCTGCCCTTGCACATTATTGGTGCAAAAGATAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT_2

Protein Analysis

383

Amino Acids

43.64

Weight (kDa)

9.48

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 690
Acc36I ACCTGC 1 cut(s) 690
AccI GTMKAC 1 cut(s) 772
AciI CCGC 6 cut(s) 647, 697, 821, 923, 947, 964
AclWI GGATC 2 cut(s) 31, 44
AcoI YGGCCR 1 cut(s) 474
AcvI CACGTG 2 cut(s) 866, 879
AfaI GTAC 4 cut(s) 542, 560, 575, 753
AfiI CCNNNNNNNGG 1 cut(s) 799
AflIII ACRYGT 3 cut(s) 570, 863, 865
AgsI TTSAA 4 cut(s) 154, 278, 683, 1066
AhlI ACTAGT 1 cut(s) 271
AjiI CACGTC 1 cut(s) 891
AleI CACNNNNGTG 2 cut(s) 449, 866
AluBI AGCT 5 cut(s) 80, 220, 293, 617, 640
AluI AGCT 5 cut(s) 80, 220, 293, 617, 640
Alw21I GWGCWC 1 cut(s) 642
Alw26I GTCTC 2 cut(s) 829, 876
AlwI GGATC 2 cut(s) 31, 44
AlwNI CAGNNNCTG 1 cut(s) 1045
Ama87I CYCGRG 2 cut(s) 618, 641
AoxI GGCC 7 cut(s) 179, 244, 474, 597, 694, 779, 986
ApaI GGGCCC 1 cut(s) 183
ApeKI GCWGC 2 cut(s) 77, 564
AspLEI GCGC 1 cut(s) 608
AspS9I GGNCC 6 cut(s) 179, 180, 245, 694, 779, 789
AsuC2I CCSGG 1 cut(s) 793
AsuHPI GGTGA 5 cut(s) 20, 327, 383, 646, 709
AvaI CYCGRG 2 cut(s) 618, 641
AvaII GGWCC 1 cut(s) 789
BaeGI GKGCMC 2 cut(s) 183, 456
BalI TGGCCA 1 cut(s) 476
BamHI GGATCC 1 cut(s) 36
BanII GRGCYC 3 cut(s) 183, 642, 663
BauI CACGAG 1 cut(s) 839
BbrPI CACGTG 2 cut(s) 866, 879
Bbv12I GWGCWC 1 cut(s) 642
BbvI GCAGC 2 cut(s) 89, 551
BccI CCATC 4 cut(s) 131, 177, 394, 970
BceAI ACGGC 3 cut(s) 593, 741, 973
BclI TGATCA 1 cut(s) 433
BcnI CCSGG 1 cut(s) 793
BcoDI GTCTC 2 cut(s) 829, 876
BcuI ACTAGT 1 cut(s) 271
BfaI CTAG 1 cut(s) 272
BfmI CTRYAG 1 cut(s) 1071
BfoI RGCGCY 1 cut(s) 609
BfuAI ACCTGC 1 cut(s) 690
BisI GCNGC 5 cut(s) 78, 565, 647, 697, 948
BlsI GCNGC 5 cut(s) 79, 566, 648, 698, 949
Bme1390I CCNGG 1 cut(s) 793
Bme18I GGWCC 1 cut(s) 789
BmeT110I CYCGRG 2 cut(s) 618, 641
BmgBI CACGTC 1 cut(s) 891
BmgT120I GGNCC 6 cut(s) 179, 180, 245, 694, 779, 789
BmiI GGNNCC 5 cut(s) 38, 181, 695, 707, 791
BmrFI CCNGG 1 cut(s) 793
BmsI GCATC 2 cut(s) 105, 219
BpuEI CTTGAG 1 cut(s) 622
BpuMI CCSGG 1 cut(s) 793
BsaAI YACGTR 2 cut(s) 866, 879
BsaI GGTCTC 1 cut(s) 829
BsaJI CCNNGG 3 cut(s) 241, 577, 782
Bsc4I CCNNNNNNNGG 1 cut(s) 799
BseDI CCNNGG 3 cut(s) 241, 577, 782
BseGI GGATG 3 cut(s) 10, 141, 723
BseLI CCNNNNNNNGG 1 cut(s) 799
BseMII CTCAG 3 cut(s) 840, 1037, 1052
BseRI GAGGAG 3 cut(s) 107, 212, 215
BseSI GKGCMC 2 cut(s) 183, 456
BseXI GCAGC 2 cut(s) 89, 551
BseYI CCCAGC 1 cut(s) 613
BshFI GGCC 7 cut(s) 181, 246, 476, 599, 696, 781, 988
BsiHKAI GWGCWC 1 cut(s) 642
BsiHKCI CYCGRG 2 cut(s) 618, 641
BsiSI CCGG 1 cut(s) 793
BsiWI CGTACG 1 cut(s) 751
BslFI GGGAC 2 cut(s) 596, 775
BslI CCNNNNNNNGG 1 cut(s) 799
BsmAI GTCTC 2 cut(s) 829, 876
BsmFI GGGAC 2 cut(s) 596, 775
BsnI GGCC 7 cut(s) 181, 246, 476, 599, 696, 781, 988
Bso31I GGTCTC 1 cut(s) 829
BsoBI CYCGRG 2 cut(s) 618, 641
Bsp120I GGGCCC 1 cut(s) 179
Bsp1286I GDGCHC 4 cut(s) 183, 456, 642, 663
Bsp143I GATC 3 cut(s) 36, 349, 433
BspACI CCGC 6 cut(s) 647, 697, 821, 923, 947, 964
BspANI GGCC 7 cut(s) 181, 246, 476, 599, 696, 781, 988
BspCNI CTCAG 3 cut(s) 839, 1038, 1051
BspLI GGNNCC 5 cut(s) 38, 181, 695, 707, 791
BspMI ACCTGC 1 cut(s) 690
BspPI GGATC 2 cut(s) 31, 44
BspTNI GGTCTC 1 cut(s) 829
BssECI CCNNGG 3 cut(s) 241, 577, 782
BssMI GATC 3 cut(s) 36, 349, 433
BssNAI GTATAC 1 cut(s) 773
BssSI CACGAG 1 cut(s) 839
BssT1I CCWWGG 2 cut(s) 241, 577
Bst1107I GTATAC 1 cut(s) 773
Bst2BI CACGAG 1 cut(s) 839
Bst6I CTCTTC 1 cut(s) 233
BstBAI YACGTR 2 cut(s) 866, 879
BstC8I GCNNGC 3 cut(s) 295, 474, 597
BstDEI CTNAG 3 cut(s) 826, 1038, 1046
BstEII GGTNACC 1 cut(s) 715
BstF5I GGATG 3 cut(s) 10, 141, 723
BstH2I RGCGCY 1 cut(s) 609
BstHHI GCGC 1 cut(s) 608
BstKTI GATC 3 cut(s) 39, 352, 436
BstMAI GTCTC 2 cut(s) 829, 876
BstMBI GATC 3 cut(s) 36, 349, 433
BstMWI GCNNNNNNNGC 4 cut(s) 482, 605, 614, 646
BstNSI RCATGY 1 cut(s) 574
BstPI GGTNACC 1 cut(s) 715
BstSCI CCNGG 1 cut(s) 791
BstSFI CTRYAG 1 cut(s) 1071
BstSLI GKGCMC 2 cut(s) 183, 456
BstV1I GCAGC 2 cut(s) 89, 551
BstX2I RGATCY 1 cut(s) 36
BstXI CCANNNNNNTGG 1 cut(s) 176
BstYI RGATCY 1 cut(s) 36
BstZ17I GTATAC 1 cut(s) 773
BsuRI GGCC 7 cut(s) 181, 246, 476, 599, 696, 781, 988
BtrI CACGTC 1 cut(s) 891
BtsCI GGATG 3 cut(s) 10, 141, 723
BveI ACCTGC 1 cut(s) 690
Cac8I GCNNGC 3 cut(s) 295, 474, 597
CaiI CAGNNNCTG 1 cut(s) 1045
CfoI GCGC 1 cut(s) 608
Cfr13I GGNCC 6 cut(s) 179, 180, 245, 694, 779, 789
Csp6I GTAC 4 cut(s) 541, 559, 574, 752
CviAII CATG 3 cut(s) 571, 712, 908
CviQI GTAC 4 cut(s) 541, 559, 574, 752
DdeI CTNAG 3 cut(s) 826, 1038, 1046
DpnI GATC 3 cut(s) 38, 351, 435
DpnII GATC 3 cut(s) 36, 349, 433
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 233
EarI CTCTTC 1 cut(s) 233
Ecl136II GAGCTC 1 cut(s) 640
Eco130I CCWWGG 2 cut(s) 241, 577
Eco24I GRGCYC 3 cut(s) 183, 642, 663
Eco31I GGTCTC 1 cut(s) 829
Eco47I GGWCC 1 cut(s) 789
Eco53kI GAGCTC 1 cut(s) 640
Eco72I CACGTG 2 cut(s) 866, 879
Eco88I CYCGRG 2 cut(s) 618, 641
Eco91I GGTNACC 1 cut(s) 715
EcoICRI GAGCTC 1 cut(s) 640
EcoO65I GGTNACC 1 cut(s) 715
EcoT14I CCWWGG 2 cut(s) 241, 577
EcoT38I GRGCYC 3 cut(s) 183, 642, 663
ErhI CCWWGG 2 cut(s) 241, 577
FaeI CATG 3 cut(s) 574, 715, 911
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FaqI GGGAC 2 cut(s) 596, 775
FatI CATG 3 cut(s) 570, 711, 907
FauNDI CATATG 1 cut(s) 514
FbaI TGATCA 1 cut(s) 433
FblI GTMKAC 1 cut(s) 772
Fnu4HI GCNGC 5 cut(s) 78, 565, 647, 697, 948
FokI GGATG 3 cut(s) 17, 128, 710
FriOI GRGCYC 3 cut(s) 183, 642, 663
Fsp4HI GCNGC 5 cut(s) 78, 565, 647, 697, 948
FspBI CTAG 1 cut(s) 272
GlaI GCGC 1 cut(s) 607
GluI GCNGC 5 cut(s) 78, 565, 647, 697, 948
GsaI CCCAGC 1 cut(s) 617
HaeII RGCGCY 1 cut(s) 609
HaeIII GGCC 7 cut(s) 181, 246, 476, 599, 696, 781, 988
HapII CCGG 1 cut(s) 793
HhaI GCGC 1 cut(s) 608
Hin1II CATG 3 cut(s) 574, 715, 911
Hin6I GCGC 1 cut(s) 606
HinP1I GCGC 1 cut(s) 606
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HinfI GANTC 1 cut(s) 154
HpaII CCGG 1 cut(s) 793
HphI GGTGA 5 cut(s) 20, 327, 383, 646, 709
Hpy166II GTNNAC 5 cut(s) 424, 654, 773, 813, 993
Hpy188III TCNNGA 1 cut(s) 683
Hpy8I GTNNAC 5 cut(s) 424, 654, 773, 813, 993
Hpy99I CGWCG 1 cut(s) 740
HpyAV CCTTC 3 cut(s) 308, 937, 1060
HpyCH4IV ACGT 3 cut(s) 865, 878, 890
HpyCH4V TGCA 4 cut(s) 838, 970, 1123, 1136
HpyF10VI GCNNNNNNNGC 4 cut(s) 482, 605, 614, 646
HpyF3I CTNAG 3 cut(s) 826, 1038, 1046
HpySE526I ACGT 3 cut(s) 865, 878, 890
Hsp92II CATG 3 cut(s) 574, 715, 911
HspAI GCGC 1 cut(s) 606
Ksp22I TGATCA 1 cut(s) 433
Kzo9I GATC 3 cut(s) 36, 349, 433
LmnI GCTCC 1 cut(s) 225
Lsp1109I GCAGC 2 cut(s) 89, 551
LweI GCATC 2 cut(s) 105, 219
MaeI CTAG 1 cut(s) 272
MaeII ACGT 3 cut(s) 865, 878, 890
MaeIII GTNAC 4 cut(s) 65, 715, 886, 1012
MalI GATC 3 cut(s) 38, 351, 435
MboI GATC 3 cut(s) 36, 349, 433
MboII GAAGA 5 cut(s) 118, 127, 220, 889, 952
MfeI CAATTG 2 cut(s) 429, 1021
MflI RGATCY 1 cut(s) 36
MhlI GDGCHC 4 cut(s) 183, 456, 642, 663
MlsI TGGCCA 1 cut(s) 476
MluCI AATT 4 cut(s) 278, 429, 465, 1021
MluNI TGGCCA 1 cut(s) 476
MmeI TCCRAC 1 cut(s) 386
Mox20I TGGCCA 1 cut(s) 476
MscI TGGCCA 1 cut(s) 476
MseI TTAA 4 cut(s) 216, 237, 306, 833
MslI CAYNNNNRTG 3 cut(s) 174, 449, 866
Msp20I TGGCCA 1 cut(s) 476
MspI CCGG 1 cut(s) 793
MspR9I CCNGG 1 cut(s) 793
MunI CAATTG 2 cut(s) 429, 1021
MwoI GCNNNNNNNGC 4 cut(s) 482, 605, 614, 646
NciI CCSGG 1 cut(s) 793
NdeI CATATG 1 cut(s) 514
NdeII GATC 3 cut(s) 36, 349, 433
NlaIII CATG 3 cut(s) 574, 715, 911
NlaIV GGNNCC 5 cut(s) 38, 181, 695, 707, 791
NmuCI GTSAC 3 cut(s) 715, 886, 1012
NspI RCATGY 1 cut(s) 574
OliI CACNNNNGTG 2 cut(s) 449, 866
PaeR7I CTCGAG 2 cut(s) 618, 641
PaqCI CACCTGC 1 cut(s) 690
PciI ACATGT 1 cut(s) 570
PfeI GAWTC 1 cut(s) 154
Pfl23II CGTACG 1 cut(s) 751
PkrI GCNGC 5 cut(s) 79, 566, 648, 698, 949
PmaCI CACGTG 2 cut(s) 866, 879
PmlI CACGTG 2 cut(s) 866, 879
Ppu21I YACGTR 2 cut(s) 866, 879
PscI ACATGT 1 cut(s) 570
Psp124BI GAGCTC 1 cut(s) 642
PspCI CACGTG 2 cut(s) 866, 879
PspEI GGTNACC 1 cut(s) 715
PspFI CCCAGC 1 cut(s) 613
PspLI CGTACG 1 cut(s) 751
PspN4I GGNNCC 5 cut(s) 38, 181, 695, 707, 791
PspOMI GGGCCC 1 cut(s) 179
PspPI GGNCC 6 cut(s) 179, 180, 245, 694, 779, 789
PspXI VCTCGAGB 2 cut(s) 618, 641
PstNI CAGNNNCTG 1 cut(s) 1045
PsuI RGATCY 1 cut(s) 36
RsaI GTAC 4 cut(s) 542, 560, 575, 753
RsaNI GTAC 4 cut(s) 541, 559, 574, 752
RseI CAYNNNNRTG 3 cut(s) 174, 449, 866
SacI GAGCTC 1 cut(s) 642
SaqAI TTAA 4 cut(s) 216, 237, 306, 833
SatI GCNGC 5 cut(s) 78, 565, 647, 697, 948
Sau3AI GATC 3 cut(s) 36, 349, 433
Sau96I GGNCC 6 cut(s) 179, 180, 245, 694, 779, 789
ScrFI CCNGG 1 cut(s) 793
SduI GDGCHC 4 cut(s) 183, 456, 642, 663
SfaNI GCATC 2 cut(s) 105, 219
SfcI CTRYAG 1 cut(s) 1071
Sfr274I CTCGAG 2 cut(s) 618, 641
SinI GGWCC 1 cut(s) 789
SlaI CTCGAG 2 cut(s) 618, 641
SmiMI CAYNNNNRTG 3 cut(s) 174, 449, 866
SmlI CTYRAG 3 cut(s) 601, 618, 641
SmoI CTYRAG 3 cut(s) 601, 618, 641
SpeI ACTAGT 1 cut(s) 271
Sse9I AATT 4 cut(s) 278, 429, 465, 1021
SsiI CCGC 6 cut(s) 647, 697, 821, 923, 947, 964
SspMI CTAG 1 cut(s) 272
SstI GAGCTC 1 cut(s) 642
StyD4I CCNGG 1 cut(s) 791
StyI CCWWGG 2 cut(s) 241, 577
TaiI ACGT 3 cut(s) 868, 881, 893
TaqI TCGA 3 cut(s) 619, 642, 983
TasI AATT 4 cut(s) 278, 429, 465, 1021
TatI WGTACW 1 cut(s) 558
TauI GCSGC 3 cut(s) 649, 699, 950
TfiI GAWTC 1 cut(s) 154
Tru1I TTAA 4 cut(s) 216, 237, 306, 833
Tru9I TTAA 4 cut(s) 216, 237, 306, 833
TseFI GTSAC 3 cut(s) 715, 886, 1012
TseI GCWGC 2 cut(s) 77, 564
Tsp45I GTSAC 3 cut(s) 715, 886, 1012
TspDTI ATGAA 5 cut(s) 13, 127, 271, 531, 953
VpaK11BI GGWCC 1 cut(s) 789
XceI RCATGY 1 cut(s) 574
XcmI CCANNNNNNNNNTGG 1 cut(s) 575
XhoI CTCGAG 2 cut(s) 618, 641
XmiI GTMKAC 1 cut(s) 772
XspI CTAG 1 cut(s) 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.