FvH4_1g10380

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000489
Physical Location & Seq
Reverse (-)
5662743 .. 5665222
2480 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g10380.t1

Sequence Viewer

Length: 1929 bp
ATGAATCACTCCAATTCGTATGAGACTCATGATGAGAGCACTGAGACAACAGGTACACTTGCTTCTCGTGTTGCTGATCAGTTTGAAGAATCGGCAGACACAAACACAGGTAACTCGTTTGTAAGTTATAGTGGCATGGATATTGATGTGTTCATAGCTGCACGAGAAGGTAATATAGATTGCCTTAGAGAACACGGAGAGCATCTTCACCAAATGTTGACTCCATCCAAGAACACAGTTCTCCATATTTATATAGCATGCGTAGGCCGTGCAACATTGGCGAAATCTGAAACAGTGCGGAAGTCGAAGCCAGCCAAAATCGTGGAGGAGATCGTCCAGATGTGCCCGCCGCTACTATTGCAGCCCAATGGTAACGGAGACACTCCATTACACTTTTCGGCCAGACATGGGCATGCTGCAATAGTGGAAGTTCTTATACAGGCTTCGAAATTAGCTTGTCATCATTCCAGCGACCTCGAGAGAGGTATCTCGACAGAAGAGACGTGCTGGCAGATGCTTATAAGAACAACCAACAAGGAAAAGAACACTGCATTGCACGAGGCTGTGCGCTTTAATCACCTTGATGTAGTGAGGATGTTGACCACAGAGGACCCCGATTTCTTCTACAGTGCAAATGATTCTGGCGAAACTCCGGTTTACATGGCTACTGAGAGGGGATATCGTGCCCTGGTTATTGAAATGCTCAAAAACTGCACAAACCCAACTTATCAAGGCCCCAATGGTTACACCTCTTTGCACGCAGCAGCTATCTCCAATGATGAACAGATGACCAAAACACTTCTAGTGAACAACAAGGCTTTGACAAGAGCAGTAGACGAACTAGGAGATACTCCACTTCACTTAGCCACATGTTGGGGTCACGCTGCAATTGTGAAACAACTGCTACAGTGTGATAAATCTGCTGCATACATTTGTGATAACAGAAACAGGTCGCCATTTCATAATGCGTGTTACCAGGGCAATATATCTGTAGTGAAAGAGCTAGCTTCTCGTTGCCCTGATTGTTGTGAATTCGTTGATAATAAAGGTCGGAATGGTCTTCACTATGCCATCGACGGAAAGAGTCATCAAGTAGAAGCCTTTATACGAAATGATCCATGGCTTAGCAGTGTCCTTTTAAATGGCAAAGATGCTGATGGGAACACACCTCTCCATTATATTGCTACTTCTCTGTATGAAGGCATGGATTTTATAAGTGAACCCAGGGTTGATAAGATGACATTTAACAAAAGAAATTTAAACGCTTTGGACATCCTTCAAAACAGTAATGAATTAAGCGAGAAGGTGGTGCTGCACTCAGAACTTACCCAGCAGTTGATAAAAACTGGTGCAAGAGGACATTGCCGTCTTCGAATCCACCAAGATGGTGAGAAGGAGTTCATGGTAAATGAAGTAAAAGAGGCCAATCTGGTAGTGTCAACACTCATAGCAACTGTAACTTTTGCAGCAGGTTTTGCCGTGCCTGGGGGTTACCAAAGTGAAAAAGGACCGGACCAGGGTTTTGCGGTACTAACAAGAAATGCAGCATTCAAAACATTCGTGATGGCCAATACACTAGCCATGTGTATGTCCAGTTGTGCTGTTATGATCCGCATTGTTCTGGCAATCCGAAGAAAGGATGAGGAGCATGGTCCCTTGATCCGAAGAAAGGAGGAGCATGGTCCTCTTCTCACTGCAATAAATCTGACATTTTACGCCTTGATCGCAATGGTGGTGGCATTTCTTACCGGCACATATTCAGTTTTAGGTTATTCACCAGAACTTGCTATCGCTGCATGTGTAACTGGTTGCTTTTTCTCCTTTGTATTTGGTTTTTTCATGCTTTCTCGCAAAATGGATAACCTCCGTATACATTATTTCAATGCGCATGACACCGTCATGATCTGGTTACGCATGTACAAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

643

Amino Acids

71.52

Weight (kDa)

6.2

Isoelectric Point (pI)

37.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 106 - 203 1.6e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 175 - 236 1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 221 - 305 1.4e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 267 - 337 1.4e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 298 - 361 2.9e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 320 - 406 6.9e-07 Ankyrin repeats (3 copies)
PGG PF13962 470 - 587 8.3e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 521, 1214
AasI GACNNNNNNGTC 1 cut(s) 1365
Acc16I TGCGCA 1 cut(s) 1887
Acc36I ACCTGC 1 cut(s) 1460
AccB7I CCANNNNNTGG 1 cut(s) 873
AccI GTMKAC 2 cut(s) 834, 1870
AciI CCGC 5 cut(s) 298, 347, 350, 1526, 1612
AclWI GGATC 3 cut(s) 1109, 1603, 1654
AcoI YGGCCR 2 cut(s) 399, 1566
AcsI RAATTY 2 cut(s) 1031, 1255
AfaI GTAC 3 cut(s) 55, 1530, 1919
AfiI CCNNNNNNNGG 6 cut(s) 408, 873, 1485, 1517, 1636, 1669
AflIII ACRYGT 1 cut(s) 869
AgsI TTSAA 5 cut(s) 86, 698, 1280, 1552, 1882
AjiI CACGTC 1 cut(s) 504
AjnI CCWGG 5 cut(s) 687, 975, 1223, 1483, 1515
AluBI AGCT 5 cut(s) 158, 455, 767, 1003, 1007
AluI AGCT 5 cut(s) 158, 455, 767, 1003, 1007
Alw21I GWGCWC 1 cut(s) 41
Alw26I GTCTC 4 cut(s) 17, 38, 372, 494
AlwI GGATC 3 cut(s) 1109, 1603, 1654
Ama87I CYCGRG 1 cut(s) 476
AoxI GGCC 5 cut(s) 265, 399, 733, 1422, 1566
ApoI RAATTY 2 cut(s) 1031, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 1505, 1537
Asp700I GAANNNNTTC 1 cut(s) 1397
AspLEI GCGC 2 cut(s) 570, 1888
AspS9I GGNCC 6 cut(s) 610, 734, 1508, 1513, 1652, 1682
AsuHPI GGTGA 4 cut(s) 200, 569, 1400, 1767
AsuII TTCGAA 2 cut(s) 446, 1372
AsuNHI GCTAGC 1 cut(s) 1003
AvaI CYCGRG 1 cut(s) 476
AvaII GGWCC 5 cut(s) 610, 1508, 1513, 1652, 1682
BaeGI GKGCMC 2 cut(s) 347, 688
BalI TGGCCA 1 cut(s) 1568
BarI GAAGNNNNNNTAC 6 cut(s) 46, 78, 420, 452, 1089, 1121
BauI CACGAG 3 cut(s) 66, 162, 557
BbsI GAAGAC 2 cut(s) 1052, 1361
Bbv12I GWGCWC 1 cut(s) 41
BccI CCATC 5 cut(s) 232, 1079, 1151, 1379, 1558
BceAI ACGGC 3 cut(s) 252, 1350, 1463
BciT130I CCWGG 5 cut(s) 689, 977, 1225, 1485, 1517
BclI TGATCA 1 cut(s) 76
BcoDI GTCTC 4 cut(s) 17, 38, 372, 494
BfaI CTAG 4 cut(s) 803, 842, 1004, 1577
BfmI CTRYAG 3 cut(s) 625, 905, 990
BfuAI ACCTGC 1 cut(s) 1460
BlpI GCTNAGC 1 cut(s) 1124
Bme1390I CCNGG 5 cut(s) 689, 977, 1225, 1485, 1517
Bme18I GGWCC 5 cut(s) 610, 1508, 1513, 1652, 1682
BmeT110I CYCGRG 1 cut(s) 476
BmgBI CACGTC 1 cut(s) 504
BmgT120I GGNCC 6 cut(s) 610, 734, 1508, 1513, 1652, 1682
BmiI GGNNCC 3 cut(s) 612, 736, 1654
BmrFI CCNGG 5 cut(s) 689, 977, 1225, 1485, 1517
BmsI GCATC 3 cut(s) 211, 504, 1141
BmtI GCTAGC 1 cut(s) 1007
BpiI GAAGAC 2 cut(s) 1052, 1361
Bpu1102I GCTNAGC 1 cut(s) 1124
Bpu14I TTCGAA 2 cut(s) 446, 1372
BsaJI CCNNGG 7 cut(s) 687, 976, 1118, 1223, 1224, 1484, 1516
BsaWI WCCGGW 2 cut(s) 652, 1510
Bsc4I CCNNNNNNNGG 6 cut(s) 408, 873, 1485, 1517, 1636, 1669
Bse118I RCCGGY 1 cut(s) 1748
Bse1I ACTGG 3 cut(s) 1351, 1593, 1810
Bse3DI GCAATG 3 cut(s) 551, 1360, 1734
BseBI CCWGG 5 cut(s) 689, 977, 1225, 1485, 1517
BseDI CCNNGG 7 cut(s) 687, 976, 1118, 1223, 1224, 1484, 1516
BseGI GGATG 4 cut(s) 224, 600, 1272, 1645
BseLI CCNNNNNNNGG 6 cut(s) 408, 873, 1485, 1517, 1636, 1669
BseMI GCAATG 3 cut(s) 551, 1360, 1734
BseMII CTCAG 3 cut(s) 33, 660, 1332
BseNI ACTGG 3 cut(s) 1351, 1593, 1810
BseRI GAGGAG 3 cut(s) 341, 1658, 1688
BseSI GKGCMC 2 cut(s) 347, 688
BseYI CCCAGC 1 cut(s) 1329
BsgI GTGCAG 3 cut(s) 144, 697, 1298
BshFI GGCC 5 cut(s) 267, 401, 735, 1424, 1568
BsiHKAI GWGCWC 1 cut(s) 41
BsiHKCI CYCGRG 1 cut(s) 476
BsiSI CCGG 3 cut(s) 653, 1511, 1749
BslFI GGGAC 1 cut(s) 1638
BslI CCNNNNNNNGG 6 cut(s) 408, 873, 1485, 1517, 1636, 1669
BsmAI GTCTC 4 cut(s) 17, 38, 372, 494
BsmBI CGTCTC 1 cut(s) 494
BsmFI GGGAC 1 cut(s) 1638
BsmI GAATGC 1 cut(s) 1547
BsnI GGCC 5 cut(s) 267, 401, 735, 1424, 1568
BsoBI CYCGRG 1 cut(s) 476
Bsp119I TTCGAA 2 cut(s) 446, 1372
Bsp1286I GDGCHC 3 cut(s) 41, 347, 688
Bsp1407I TGTACA 1 cut(s) 1917
Bsp143I GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
Bsp1720I GCTNAGC 1 cut(s) 1124
Bsp19I CCATGG 1 cut(s) 1118
BspACI CCGC 5 cut(s) 298, 347, 350, 1526, 1612
BspANI GGCC 5 cut(s) 267, 401, 735, 1424, 1568
BspCNI CTCAG 3 cut(s) 34, 661, 1331
BspHI TCATGA 2 cut(s) 28, 1899
BspLI GGNNCC 3 cut(s) 612, 736, 1654
BspMI ACCTGC 1 cut(s) 1460
BspOI GCTAGC 1 cut(s) 1007
BspPI GGATC 3 cut(s) 1109, 1603, 1654
BspT104I TTCGAA 2 cut(s) 446, 1372
BsrDI GCAATG 3 cut(s) 551, 1360, 1734
BsrFI RCCGGY 1 cut(s) 1748
BsrGI TGTACA 1 cut(s) 1917
BsrI ACTGG 3 cut(s) 1351, 1593, 1810
BssAI RCCGGY 1 cut(s) 1748
BssECI CCNNGG 7 cut(s) 687, 976, 1118, 1223, 1224, 1484, 1516
BssMI GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
BssNAI GTATAC 1 cut(s) 1871
BssSI CACGAG 3 cut(s) 66, 162, 557
BssT1I CCWWGG 1 cut(s) 1118
Bst1107I GTATAC 1 cut(s) 1871
Bst2BI CACGAG 3 cut(s) 66, 162, 557
Bst2UI CCWGG 5 cut(s) 689, 977, 1225, 1485, 1517
Bst4CI ACNGT 7 cut(s) 238, 295, 629, 909, 1286, 1456, 1897
Bst6I CTCTTC 2 cut(s) 492, 1692
BstAPI GCANNNNNTGC 1 cut(s) 1475
BstAUI TGTACA 1 cut(s) 1917
BstBI TTCGAA 2 cut(s) 446, 1372
BstC8I GCNNGC 7 cut(s) 259, 312, 347, 414, 509, 759, 1005
BstDEI CTNAG 6 cut(s) 42, 185, 669, 862, 1124, 1318
BstDSI CCRYGG 1 cut(s) 1118
BstEII GGTNACC 1 cut(s) 1490
BstF5I GGATG 4 cut(s) 224, 600, 1272, 1645
BstHHI GCGC 2 cut(s) 570, 1888
BstKTI GATC 7 cut(s) 79, 333, 1117, 1611, 1662, 1725, 1905
BstMAI GTCTC 4 cut(s) 17, 38, 372, 494
BstMBI GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
BstMWI GCNNNNNNNGC 5 cut(s) 278, 358, 1475, 1724, 1793
BstNI CCWGG 5 cut(s) 689, 977, 1225, 1485, 1517
BstNSI RCATGY 5 cut(s) 261, 416, 873, 1800, 1918
BstPI GGTNACC 1 cut(s) 1490
BstSCI CCNGG 5 cut(s) 687, 975, 1223, 1483, 1515
BstSFI CTRYAG 3 cut(s) 625, 905, 990
BstSLI GKGCMC 2 cut(s) 347, 688
BstV2I GAAGAC 2 cut(s) 1052, 1361
BstXI CCANNNNNNTGG 2 cut(s) 322, 1385
BstZ17I GTATAC 1 cut(s) 1871
BsuRI GGCC 5 cut(s) 267, 401, 735, 1424, 1568
BtgI CCRYGG 1 cut(s) 1118
BtrI CACGTC 1 cut(s) 504
BtsCI GGATG 4 cut(s) 224, 600, 1272, 1645
BtsI GCAGTG 3 cut(s) 546, 1135, 1692
BtsIMutI CAGTG 7 cut(s) 39, 300, 546, 634, 914, 1135, 1692
BveI ACCTGC 1 cut(s) 1460
Cac8I GCNNGC 7 cut(s) 259, 312, 347, 414, 509, 759, 1005
CciI TCATGA 2 cut(s) 28, 1899
CfoI GCGC 2 cut(s) 570, 1888
Cfr10I RCCGGY 1 cut(s) 1748
Cfr13I GGNCC 6 cut(s) 610, 734, 1508, 1513, 1652, 1682
Csp6I GTAC 3 cut(s) 54, 1529, 1918
CspCI CAANNNNNGTGG 2 cut(s) 1716, 1751
CviQI GTAC 3 cut(s) 54, 1529, 1918
DdeI CTNAG 6 cut(s) 42, 185, 669, 862, 1124, 1318
DpnI GATC 7 cut(s) 78, 332, 1116, 1610, 1661, 1724, 1904
DpnII GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
DraI TTTAAA 2 cut(s) 1140, 1260
DrdI GACNNNNNNGTC 1 cut(s) 1365
DseDI GACNNNNNNGTC 1 cut(s) 1365
EaeI YGGCCR 2 cut(s) 399, 1566
Eam1104I CTCTTC 2 cut(s) 492, 1692
EarI CTCTTC 2 cut(s) 492, 1692
Eco130I CCWWGG 1 cut(s) 1118
Eco32I GATATC 1 cut(s) 680
Eco47I GGWCC 5 cut(s) 610, 1508, 1513, 1652, 1682
Eco88I CYCGRG 1 cut(s) 476
Eco91I GGTNACC 1 cut(s) 1490
EcoO109I RGGNCCY 2 cut(s) 610, 734
EcoO65I GGTNACC 1 cut(s) 1490
EcoRI GAATTC 1 cut(s) 1031
EcoRII CCWGG 5 cut(s) 687, 975, 1223, 1483, 1515
EcoRV GATATC 1 cut(s) 680
EcoT14I CCWWGG 1 cut(s) 1118
ErhI CCWWGG 1 cut(s) 1118
Esp3I CGTCTC 1 cut(s) 494
FaqI GGGAC 1 cut(s) 1638
FauI CCCGC 1 cut(s) 354
FbaI TGATCA 1 cut(s) 76
FblI GTMKAC 2 cut(s) 834, 1870
FokI GGATG 4 cut(s) 211, 607, 1259, 1652
FspAI RTGCGCAY 1 cut(s) 1887
FspBI CTAG 4 cut(s) 803, 842, 1004, 1577
FspI TGCGCA 1 cut(s) 1887
GlaI GCGC 2 cut(s) 569, 1887
GsaI CCCAGC 1 cut(s) 1333
HaeIII GGCC 5 cut(s) 267, 401, 735, 1424, 1568
HapII CCGG 3 cut(s) 653, 1511, 1749
HhaI GCGC 2 cut(s) 570, 1888
Hin6I GCGC 2 cut(s) 568, 1886
HinP1I GCGC 2 cut(s) 568, 1886
HincII GTYRAC 3 cut(s) 219, 600, 1440
HindII GTYRAC 3 cut(s) 219, 600, 1440
HinfI GANTC 7 cut(s) 4, 25, 89, 220, 638, 1084, 1374
HpaII CCGG 3 cut(s) 653, 1511, 1749
HphI GGTGA 4 cut(s) 200, 569, 1400, 1767
Hpy166II GTNNAC 9 cut(s) 56, 219, 600, 658, 808, 835, 1220, 1440, 1871
Hpy188I TCNGA 6 cut(s) 289, 1053, 1321, 1631, 1664, 1707
Hpy188III TCNNGA 6 cut(s) 29, 337, 478, 490, 1561, 1900
Hpy8I GTNNAC 9 cut(s) 56, 219, 600, 658, 808, 835, 1220, 1440, 1871
Hpy99I CGWCG 1 cut(s) 1079
HpyAV CCTTC 5 cut(s) 161, 1193, 1286, 1297, 1387
HpyCH4III ACNGT 7 cut(s) 238, 295, 629, 909, 1286, 1456, 1897
HpyCH4IV ACGT 1 cut(s) 503
HpyF10VI GCNNNNNNNGC 5 cut(s) 278, 358, 1475, 1724, 1793
HpyF3I CTNAG 6 cut(s) 42, 185, 669, 862, 1124, 1318
HpySE526I ACGT 1 cut(s) 503
HspAI GCGC 2 cut(s) 568, 1886
Ksp22I TGATCA 1 cut(s) 76
Kzo9I GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
LmnI GCTCC 2 cut(s) 1645, 1675
LweI GCATC 3 cut(s) 211, 504, 1141
MaeI CTAG 4 cut(s) 803, 842, 1004, 1577
MaeII ACGT 1 cut(s) 503
MaeIII GTNAC 9 cut(s) 110, 371, 743, 878, 971, 1456, 1490, 1801, 1908
MalI GATC 7 cut(s) 78, 332, 1116, 1610, 1661, 1724, 1904
MboI GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
MboII GAAGA 9 cut(s) 98, 197, 509, 613, 1052, 1361, 1644, 1677, 1679
MfeI CAATTG 1 cut(s) 888
MhlI GDGCHC 3 cut(s) 41, 347, 688
MlsI TGGCCA 1 cut(s) 1568
MluCI AATT 6 cut(s) 13, 449, 888, 1031, 1255, 1292
MluNI TGGCCA 1 cut(s) 1568
MlyI GAGTC 3 cut(s) 19, 214, 1093
MmeI TCCRAC 1 cut(s) 1031
Mox20I TGGCCA 1 cut(s) 1568
MroXI GAANNNNTTC 1 cut(s) 1397
MscI TGGCCA 1 cut(s) 1568
MseI TTAA 5 cut(s) 573, 1139, 1245, 1259, 1295
MslI CAYNNNNRTG 5 cut(s) 411, 582, 1383, 1586, 1898
Msp20I TGGCCA 1 cut(s) 1568
MspI CCGG 3 cut(s) 653, 1511, 1749
MspR9I CCNGG 5 cut(s) 689, 977, 1225, 1485, 1517
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1547
MvaI CCWGG 5 cut(s) 689, 977, 1225, 1485, 1517
MwoI GCNNNNNNNGC 5 cut(s) 278, 358, 1475, 1724, 1793
NcoI CCATGG 1 cut(s) 1118
NdeII GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
NheI GCTAGC 1 cut(s) 1003
NlaIV GGNNCC 3 cut(s) 612, 736, 1654
NmuCI GTSAC 1 cut(s) 878
NsbI TGCGCA 1 cut(s) 1887
NspI RCATGY 5 cut(s) 261, 416, 873, 1800, 1918
NspV TTCGAA 2 cut(s) 446, 1372
PaeI GCATGC 2 cut(s) 261, 416
PaeR7I CTCGAG 1 cut(s) 476
PagI TCATGA 2 cut(s) 28, 1899
PasI CCCWGGG 1 cut(s) 1224
PciI ACATGT 1 cut(s) 869
PctI GAATGC 1 cut(s) 1547
PdmI GAANNNNTTC 1 cut(s) 1397
PfeI GAWTC 4 cut(s) 4, 89, 638, 1374
PflFI GACNNNGTC 1 cut(s) 1895
PflMI CCANNNNNTGG 1 cut(s) 873
PleI GAGTC 3 cut(s) 19, 214, 1092
PpsI GAGTC 3 cut(s) 19, 214, 1092
PpuMI RGGWCCY 1 cut(s) 610
PscI ACATGT 1 cut(s) 869
PsiI TTATAA 2 cut(s) 521, 1214
Psp5II RGGWCCY 1 cut(s) 610
Psp6I CCWGG 5 cut(s) 687, 975, 1223, 1483, 1515
PspEI GGTNACC 1 cut(s) 1490
PspFI CCCAGC 1 cut(s) 1329
PspGI CCWGG 5 cut(s) 687, 975, 1223, 1483, 1515
PspN4I GGNNCC 3 cut(s) 612, 736, 1654
PspPI GGNCC 6 cut(s) 610, 734, 1508, 1513, 1652, 1682
PspPPI RGGWCCY 1 cut(s) 610
PsyI GACNNNGTC 1 cut(s) 1895
RsaI GTAC 3 cut(s) 55, 1530, 1919
RsaNI GTAC 3 cut(s) 54, 1529, 1918
RseI CAYNNNNRTG 5 cut(s) 411, 582, 1383, 1586, 1898
SaqAI TTAA 5 cut(s) 573, 1139, 1245, 1259, 1295
Sau3AI GATC 7 cut(s) 76, 330, 1114, 1608, 1659, 1722, 1902
Sau96I GGNCC 6 cut(s) 610, 734, 1508, 1513, 1652, 1682
SchI GAGTC 3 cut(s) 19, 214, 1093
ScrFI CCNGG 5 cut(s) 689, 977, 1225, 1485, 1517
SduI GDGCHC 3 cut(s) 41, 347, 688
SfaNI GCATC 3 cut(s) 211, 504, 1141
SfcI CTRYAG 3 cut(s) 625, 905, 990
Sfr274I CTCGAG 1 cut(s) 476
SfuI TTCGAA 2 cut(s) 446, 1372
SinI GGWCC 5 cut(s) 610, 1508, 1513, 1652, 1682
SlaI CTCGAG 1 cut(s) 476
SmiMI CAYNNNNRTG 5 cut(s) 411, 582, 1383, 1586, 1898
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
SphI GCATGC 2 cut(s) 261, 416
Sse9I AATT 6 cut(s) 13, 449, 888, 1031, 1255, 1292
SsiI CCGC 5 cut(s) 298, 347, 350, 1526, 1612
SspMI CTAG 4 cut(s) 803, 842, 1004, 1577
StyD4I CCNGG 5 cut(s) 687, 975, 1223, 1483, 1515
StyI CCWWGG 1 cut(s) 1118
TaaI ACNGT 7 cut(s) 238, 295, 629, 909, 1286, 1456, 1897
TaiI ACGT 1 cut(s) 506
TaqI TCGA 6 cut(s) 305, 446, 477, 491, 1074, 1372
TasI AATT 6 cut(s) 13, 449, 888, 1031, 1255, 1292
TatI WGTACW 1 cut(s) 1917
TauI GCSGC 1 cut(s) 352
TfiI GAWTC 4 cut(s) 4, 89, 638, 1374
Tru1I TTAA 5 cut(s) 573, 1139, 1245, 1259, 1295
Tru9I TTAA 5 cut(s) 573, 1139, 1245, 1259, 1295
TscAI CASTG 7 cut(s) 46, 300, 553, 634, 914, 1135, 1699
TseFI GTSAC 1 cut(s) 878
Tsp45I GTSAC 1 cut(s) 878
TspDTI ATGAA 9 cut(s) 17, 142, 795, 950, 1212, 1305, 1390, 1425, 1828
TspGWI ACGGA 4 cut(s) 210, 390, 1092, 1856
TspRI CASTG 7 cut(s) 46, 300, 553, 634, 914, 1135, 1699
Tth111I GACNNNGTC 1 cut(s) 1895
Van91I CCANNNNNTGG 1 cut(s) 873
VpaK11BI GGWCC 5 cut(s) 610, 1508, 1513, 1652, 1682
XapI RAATTY 2 cut(s) 1031, 1255
XceI RCATGY 5 cut(s) 261, 416, 873, 1800, 1918
XhoI CTCGAG 1 cut(s) 476
XmiI GTMKAC 2 cut(s) 834, 1870
XmnI GAANNNNTTC 1 cut(s) 1397
XspI CTAG 4 cut(s) 803, 842, 1004, 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.