Rh7AG461200

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000489
Physical Location & Seq
Reverse (-)
63422907 .. 63427051
4145 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG461200.1

Sequence Viewer

Length: 1905 bp
ATGAATCCCTCTGATTCAGCTGAGACGGAGATCAGTAGTCCAACATCGGCCTATCATGCCACGATACTGGAGGAGACCAACGCAGTGTTCTGTTCTGAATGGAATCAGCAGAAATCTACACCAGTTAAGAGACGCTTAAGCGGCATGGATACTCAGGTGTTCAAGGCGGCACGAGAGGGCAATATTGATGCCCTTAGAGAACATAGTGATCATCTTCACCAAATACTGACTTCAACCAAAAACACAGTCCTCCATGTCTATATAGCTTGCGTAGGCAGTGCAAGGTTGACAGAGTCTGAAGAATTGCTGAAATCAGCCGAGGTTGTAAGGGAGATGCTTAAAATGTGCCAGCGGCTACTATTGCAGCCAAACGAGAGCGGTGATACTGCCTTACACTTGGCGGCAAGACACGGACGTGCTGACATAGTTGAAGTTCTTATTCGGGCTGCGAAAGACTGGCATGGCGACCTCGAGGAAGGTATCTCATCAAAAGACGTATACTACCAGTTTCTCATTAGAAGACCTAACGAGGAGAAAAACACAGCCTTGCACGAGGCAGTGCGGTTCGATCACCTTGATGTGGTTAAGATATTGACTAGGGAAGACCCCGAGTTTTTGTACTCTGCTAATAATGGTGGGGAAACTCCGCTCTACATGGCTGCCGAGAGGGGATATCCAAAATTGGTTTTTGAAATGCTCGACACTTGCACGAATCCATCCTACCAAGGACCCGATGGTATAACAGCTTTACACGCTGCAGCTACCTACGGTGATGAACAATTAACGAGAAGATTACTTGAGATGGAAAGGACGCTAGCAACAGCATCTGACGCACTAGGAATGACTCCACTTCATTTGGCTGCAGCTAAGGGTCGCGCTTCAATTGTGAAACAAATACTGGAATGTGATAAGTCCACTGCCTACATTGTCAACATGTACAAGTTGACACCCGTTCATTATGCAGCCCATGCAGGGCATGTAGATGTACTGAAACAGCTTATTTTCTATTGCCCGGACAGTTGCGAATTGGTGGACCAAGACGGTCGCAATGCCCTACACTTAGCAATTATCGGTAATGAAGAAAAAGTAGAAGAGTTTGTTCGGAAAGATCCATGGCTTAGTAGCGTCCTTTTAAATGGCAAAGATTCTGTCGGAAACACACCGCTCCATCAAATTGCTACTTCTGATCAAGAATACGATGGCTTGGAATTTATCAGTGATTCTAGAGTCGATAAGATGGCATTCAACAAAAAAAATAAGAACGCGCTAGACATCATTCTGCATAGAACTGATTCTCAGTGGAAGAGGAACCTCATACAAGGGTTGAGAAATTTTGGTGCAAGAGAGAGTCAACGAGTGTCAAGAGACAAAGGTGGTGACAAGGAAGGTGACAGAGAGTCAAAATACAAGGAAATAAAAGAATCTCATATGGTAGTATCTGCACTCATAGCAACTGTAACCTTCGCAGCAGGTTTCACTGTGCCTGGTGGTTACCAAAGTGAAAAAGGGCCAGATCAAGGTTTTGCAGTTCTATCAAGAAATGCAGCTTTCAAGGCGTTTGTGATAACAAATACATTAGCCATGACTCTGTCCAGTAGTGCTGTCATGCTACGCTTTCTCTCATCACTGAACTGGTCAGATTCATTATTAAGTGTGGCGCTAAATTGTACCTTTTTCGCTCTGATTGCAATGGTGGCTGCATTCCTTACCGGTGCATATGCAGTATTAGGGGGTCATTCTTCATTAGGACTTGCCATTGCGAATTGTGTGCTTGGGGCTGGCTTCTTCTCGGCTATATGTTTTGTCTCTATTTCTCCAGCTTTCAGTACTTTTCGTAATCGTGTCTCTCTTCTCCATCTCCGCATAATTACCCTGCTCGGATTGGAATCAGTATTTTTGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

634

Amino Acids

70.05

Weight (kDa)

6.04

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 55 - 148 1.4e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 176 - 233 1.6e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 217 - 303 8.6e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 250 - 297 1.1e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 319 - 412 1.6e-09 Ankyrin repeats (3 copies)
PGG PF13962 467 - 575 2.5e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 470
Acc36I ACCTGC 1 cut(s) 1460
AccBSI CCGCTC 3 cut(s) 378, 649, 1165
AccI GTMKAC 1 cut(s) 498
AccII CGCG 2 cut(s) 876, 1265
AciI CCGC 9 cut(s) 141, 167, 352, 378, 401, 562, 647, 1163, 1861
AclWI GGATC 1 cut(s) 1103
AcsI RAATTY 2 cut(s) 1208, 1330
AcuI CTGAAG 1 cut(s) 318
AfaI GTAC 5 cut(s) 620, 938, 987, 1669, 1828
AfiI CCNNNNNNNGG 3 cut(s) 580, 972, 1517
AflII CTTAAG 1 cut(s) 136
AflIII ACRYGT 1 cut(s) 933
AgeI ACCGGT 1 cut(s) 1709
AgsI TTSAA 7 cut(s) 163, 234, 431, 692, 882, 1246, 1552
AhdI GACNNNNNGTC 1 cut(s) 1396
AjiI CACGTC 1 cut(s) 416
AjnI CCWGG 1 cut(s) 1483
AjuI GAANNNNNNNTTGG 2 cut(s) 71, 103
AleI CACNNNNGTG 1 cut(s) 414
AluBI AGCT 8 cut(s) 20, 266, 746, 761, 866, 997, 1547, 1820
AluI AGCT 8 cut(s) 20, 266, 746, 761, 866, 997, 1547, 1820
Alw26I GTCTC 6 cut(s) 17, 68, 124, 1359, 1810, 1849
AlwI GGATC 1 cut(s) 1103
AlwNI CAGNNNCTG 2 cut(s) 296, 827
Ama87I CYCGRG 2 cut(s) 470, 608
AoxI GGCC 2 cut(s) 48, 1508
ApoI RAATTY 2 cut(s) 1208, 1330
ArsI GACNNNNNNTTYG 4 cut(s) 231, 263, 1134, 1166
AsiGI ACCGGT 1 cut(s) 1709
Asp700I GAANNNNTTC 1 cut(s) 1291
AspLEI GCGC 3 cut(s) 878, 1267, 1660
AspS9I GGNCC 3 cut(s) 728, 1033, 1508
AsuC2I CCSGG 1 cut(s) 1013
AsuHPI GGTGA 6 cut(s) 209, 392, 563, 782, 1388, 1400
AsuNHI GCTAGC 1 cut(s) 814
AvaI CYCGRG 2 cut(s) 470, 608
AvaII GGWCC 2 cut(s) 728, 1033
BaeI ACNNNNGTAYC 2 cut(s) 141, 174
BauI CACGAG 2 cut(s) 171, 551
BbsI GAAGAC 2 cut(s) 526, 609
BccI CCATC 7 cut(s) 724, 728, 796, 1176, 1193, 1231, 1863
BcgI CGANNNNNNTGC 2 cut(s) 1750, 1784
BciT130I CCWGG 1 cut(s) 1485
BciVI GTATCC 1 cut(s) 142
BclI TGATCA 2 cut(s) 208, 1186
BcnI CCSGG 1 cut(s) 1013
BcoDI GTCTC 6 cut(s) 17, 68, 124, 1359, 1810, 1849
BfaI CTAG 5 cut(s) 597, 815, 836, 1224, 1268
BfmI CTRYAG 2 cut(s) 756, 861
BfoI RGCGCY 1 cut(s) 1661
BfrI CTTAAG 1 cut(s) 136
BfuAI ACCTGC 1 cut(s) 1460
BfuI GTATCC 1 cut(s) 142
BmcAI AGTACT 1 cut(s) 1828
Bme1390I CCNGG 2 cut(s) 1013, 1485
Bme18I GGWCC 2 cut(s) 728, 1033
BmeRI GACNNNNNGTC 1 cut(s) 1396
BmeT110I CYCGRG 2 cut(s) 470, 608
BmgBI CACGTC 1 cut(s) 416
BmgT120I GGNCC 3 cut(s) 728, 1033, 1508
BmiI GGNNCC 2 cut(s) 730, 1310
BmrFI CCNGG 2 cut(s) 1013, 1485
BmsI GCATC 3 cut(s) 178, 324, 833
BmtI GCTAGC 1 cut(s) 818
BpiI GAAGAC 2 cut(s) 526, 609
BpmI CTGGAG 2 cut(s) 89, 1800
Bpu10I CCTNAGC 1 cut(s) 867
BpuEI CTTGAG 1 cut(s) 818
BpuMI CCSGG 1 cut(s) 1013
BsaBI GATNNNNATC 1 cut(s) 1885
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 3 cut(s) 318, 724, 1112
BsaWI WCCGGW 1 cut(s) 1709
Bsc4I CCNNNNNNNGG 3 cut(s) 580, 972, 1517
Bse118I RCCGGY 1 cut(s) 1709
Bse1I ACTGG 7 cut(s) 72, 122, 461, 505, 903, 1593, 1637
Bse3DI GCAATG 3 cut(s) 1054, 1695, 1755
Bse8I GATNNNNATC 1 cut(s) 1885
BseBI CCWGG 1 cut(s) 1485
BseDI CCNNGG 3 cut(s) 318, 724, 1112
BseGI GGATG 1 cut(s) 716
BseJI GATNNNNATC 1 cut(s) 1885
BseLI CCNNNNNNNGG 3 cut(s) 580, 972, 1517
BseMI GCAATG 3 cut(s) 1054, 1695, 1755
BseMII CTCAG 3 cut(s) 12, 167, 1310
BseNI ACTGG 7 cut(s) 72, 122, 461, 505, 903, 1593, 1637
BseRI GAGGAG 2 cut(s) 86, 545
BsgI GTGCAG 1 cut(s) 1425
Bsh1236I CGCG 2 cut(s) 876, 1265
Bsh1285I CGRYCG 1 cut(s) 1045
BshFI GGCC 2 cut(s) 50, 1510
BshTI ACCGGT 1 cut(s) 1709
BsiEI CGRYCG 1 cut(s) 1045
BsiHKCI CYCGRG 2 cut(s) 470, 608
BsiSI CCGG 2 cut(s) 1013, 1710
BslI CCNNNNNNNGG 3 cut(s) 580, 972, 1517
BsmAI GTCTC 6 cut(s) 17, 68, 124, 1359, 1810, 1849
BsmBI CGTCTC 2 cut(s) 17, 124
BsmI GAATGC 2 cut(s) 1241, 1700
BsnI GGCC 2 cut(s) 50, 1510
Bso31I GGTCTC 1 cut(s) 68
BsoBI CYCGRG 2 cut(s) 470, 608
Bsp1407I TGTACA 1 cut(s) 936
Bsp143I GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
Bsp19I CCATGG 1 cut(s) 1112
BspACI CCGC 9 cut(s) 141, 167, 352, 378, 401, 562, 647, 1163, 1861
BspANI GGCC 2 cut(s) 50, 1510
BspCNI CTCAG 3 cut(s) 13, 166, 1309
BspFNI CGCG 2 cut(s) 876, 1265
BspLI GGNNCC 2 cut(s) 730, 1310
BspMAI CTGCAG 2 cut(s) 760, 865
BspMI ACCTGC 1 cut(s) 1460
BspOI GCTAGC 1 cut(s) 818
BspPI GGATC 1 cut(s) 1103
BspTI CTTAAG 1 cut(s) 136
BspTNI GGTCTC 1 cut(s) 68
BsrBI CCGCTC 3 cut(s) 378, 649, 1165
BsrDI GCAATG 3 cut(s) 1054, 1695, 1755
BsrFI RCCGGY 1 cut(s) 1709
BsrGI TGTACA 1 cut(s) 936
BsrI ACTGG 7 cut(s) 72, 122, 461, 505, 903, 1593, 1637
BssAI RCCGGY 1 cut(s) 1709
BssECI CCNNGG 3 cut(s) 318, 724, 1112
BssMI GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
BssNAI GTATAC 1 cut(s) 499
BssSI CACGAG 2 cut(s) 171, 551
BssT1I CCWWGG 2 cut(s) 724, 1112
Bst1107I GTATAC 1 cut(s) 499
Bst2BI CACGAG 2 cut(s) 171, 551
Bst2UI CCWGG 1 cut(s) 1485
Bst4CI ACNGT 6 cut(s) 247, 770, 1019, 1043, 1456, 1480
Bst6I CTCTTC 3 cut(s) 1086, 1298, 1854
BstAFI CTTAAG 1 cut(s) 136
BstAPI GCANNNNNTGC 1 cut(s) 968
BstAUI TGTACA 1 cut(s) 936
BstC8I GCNNGC 4 cut(s) 268, 350, 816, 1780
BstDEI CTNAG 7 cut(s) 21, 153, 194, 867, 1060, 1118, 1296
BstDSI CCRYGG 1 cut(s) 1112
BstEII GGTNACC 1 cut(s) 1490
BstF5I GGATG 1 cut(s) 716
BstFNI CGCG 2 cut(s) 876, 1265
BstH2I RGCGCY 1 cut(s) 1661
BstHHI GCGC 3 cut(s) 878, 1267, 1660
BstKTI GATC 6 cut(s) 33, 211, 571, 1111, 1189, 1516
BstMAI GTCTC 6 cut(s) 17, 68, 124, 1359, 1810, 1849
BstMBI GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
BstMCI CGRYCG 1 cut(s) 1045
BstNI CCWGG 1 cut(s) 1485
BstNSI RCATGY 2 cut(s) 937, 980
BstPI GGTNACC 1 cut(s) 1490
BstSCI CCNGG 2 cut(s) 1011, 1483
BstSFI CTRYAG 2 cut(s) 756, 861
BstUI CGCG 2 cut(s) 876, 1265
BstV2I GAAGAC 2 cut(s) 526, 609
BstX2I RGATCY 1 cut(s) 1108
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 1 cut(s) 1108
BstZ17I GTATAC 1 cut(s) 499
BsuI GTATCC 1 cut(s) 142
BsuRI GGCC 2 cut(s) 50, 1510
BtgI CCRYGG 1 cut(s) 1112
BtrI CACGTC 1 cut(s) 416
BtsCI GGATG 1 cut(s) 716
BtsI GCAGTG 4 cut(s) 90, 283, 564, 915
BtsIMutI CAGTG 8 cut(s) 90, 283, 564, 915, 1222, 1304, 1476, 1625
BveI ACCTGC 1 cut(s) 1460
Cac8I GCNNGC 4 cut(s) 268, 350, 816, 1780
CaiI CAGNNNCTG 2 cut(s) 296, 827
CfoI GCGC 3 cut(s) 878, 1267, 1660
Cfr10I RCCGGY 1 cut(s) 1709
Cfr13I GGNCC 3 cut(s) 728, 1033, 1508
CseI GACGC 4 cut(s) 141, 820, 839, 1114
Csp6I GTAC 5 cut(s) 619, 937, 986, 1668, 1827
CspAI ACCGGT 1 cut(s) 1709
CspCI CAANNNNNGTGG 2 cut(s) 837, 872
CviQI GTAC 5 cut(s) 619, 937, 986, 1668, 1827
DdeI CTNAG 7 cut(s) 21, 153, 194, 867, 1060, 1118, 1296
DpnI GATC 6 cut(s) 32, 210, 570, 1110, 1188, 1515
DpnII GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
DraI TTTAAA 1 cut(s) 1134
DriI GACNNNNNGTC 1 cut(s) 1396
Eam1104I CTCTTC 3 cut(s) 1086, 1298, 1854
Eam1105I GACNNNNNGTC 1 cut(s) 1396
EarI CTCTTC 3 cut(s) 1086, 1298, 1854
Eco130I CCWWGG 2 cut(s) 724, 1112
Eco31I GGTCTC 1 cut(s) 68
Eco32I GATATC 1 cut(s) 674
Eco47I GGWCC 2 cut(s) 728, 1033
Eco57I CTGAAG 1 cut(s) 318
Eco88I CYCGRG 2 cut(s) 470, 608
Eco91I GGTNACC 1 cut(s) 1490
EcoO109I RGGNCCY 1 cut(s) 728
EcoO65I GGTNACC 1 cut(s) 1490
EcoRII CCWGG 1 cut(s) 1483
EcoRV GATATC 1 cut(s) 674
EcoT14I CCWWGG 2 cut(s) 724, 1112
ErhI CCWWGG 2 cut(s) 724, 1112
Esp3I CGTCTC 2 cut(s) 17, 124
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FauNDI CATATG 2 cut(s) 1428, 1717
FbaI TGATCA 2 cut(s) 208, 1186
FblI GTMKAC 1 cut(s) 498
FokI GGATG 1 cut(s) 703
FspBI CTAG 5 cut(s) 597, 815, 836, 1224, 1268
GlaI GCGC 3 cut(s) 877, 1266, 1659
GsuI CTGGAG 2 cut(s) 89, 1800
HaeII RGCGCY 1 cut(s) 1661
HaeIII GGCC 2 cut(s) 50, 1510
HapII CCGG 2 cut(s) 1013, 1710
HgaI GACGC 4 cut(s) 141, 820, 839, 1114
HhaI GCGC 3 cut(s) 878, 1267, 1660
Hin6I GCGC 3 cut(s) 876, 1265, 1658
HinP1I GCGC 3 cut(s) 876, 1265, 1658
HincII GTYRAC 4 cut(s) 288, 931, 945, 1352
HindII GTYRAC 4 cut(s) 288, 931, 945, 1352
HpaII CCGG 2 cut(s) 1013, 1710
HphI GGTGA 6 cut(s) 209, 392, 563, 782, 1388, 1400
Hpy166II GTNNAC 7 cut(s) 288, 499, 915, 931, 945, 1033, 1352
Hpy188III TCNNGA 4 cut(s) 1190, 1224, 1362, 1536
Hpy8I GTNNAC 7 cut(s) 288, 499, 915, 931, 945, 1033, 1352
HpyAV CCTTC 3 cut(s) 470, 1379, 1471
HpyCH4III ACNGT 6 cut(s) 247, 770, 1019, 1043, 1456, 1480
HpyCH4IV ACGT 2 cut(s) 415, 495
HpyF3I CTNAG 7 cut(s) 21, 153, 194, 867, 1060, 1118, 1296
HpySE526I ACGT 2 cut(s) 415, 495
HspAI GCGC 3 cut(s) 876, 1265, 1658
Ksp22I TGATCA 2 cut(s) 208, 1186
Kzo9I GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
LmnI GCTCC 1 cut(s) 1170
LweI GCATC 3 cut(s) 178, 324, 833
MaeI CTAG 5 cut(s) 597, 815, 836, 1224, 1268
MaeII ACGT 2 cut(s) 415, 495
MaeIII GTNAC 4 cut(s) 1376, 1388, 1456, 1490
MalI GATC 6 cut(s) 32, 210, 570, 1110, 1188, 1515
MbiI CCGCTC 3 cut(s) 378, 649, 1165
MboI GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
MfeI CAATTG 1 cut(s) 882
MflI RGATCY 1 cut(s) 1108
MlyI GAGTC 6 cut(s) 302, 838, 1236, 1357, 1406, 1579
MmeI TCCRAC 2 cut(s) 65, 1132
MroXI GAANNNNTTC 1 cut(s) 1291
MseI TTAA 7 cut(s) 126, 137, 339, 585, 782, 1133, 1649
MslI CAYNNNNRTG 3 cut(s) 414, 576, 981
MspA1I CMGCKG 2 cut(s) 20, 352
MspCI CTTAAG 1 cut(s) 136
MspI CCGG 2 cut(s) 1013, 1710
MspR9I CCNGG 2 cut(s) 1013, 1485
MunI CAATTG 1 cut(s) 882
Mva1269I GAATGC 2 cut(s) 1241, 1700
MvaI CCWGG 1 cut(s) 1485
MvnI CGCG 2 cut(s) 876, 1265
NciI CCSGG 1 cut(s) 1013
NcoI CCATGG 1 cut(s) 1112
NdeI CATATG 2 cut(s) 1428, 1717
NdeII GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
NheI GCTAGC 1 cut(s) 814
NlaIV GGNNCC 2 cut(s) 730, 1310
NmeAIII GCCGAG 3 cut(s) 343, 688, 1769
NmuCI GTSAC 2 cut(s) 1376, 1388
NspI RCATGY 2 cut(s) 937, 980
OliI CACNNNNGTG 1 cut(s) 414
PaeR7I CTCGAG 1 cut(s) 470
PciI ACATGT 1 cut(s) 933
PctI GAATGC 2 cut(s) 1241, 1700
PdmI GAANNNNTTC 1 cut(s) 1291
PflFI GACNNNGTC 2 cut(s) 292, 1588
PinAI ACCGGT 1 cut(s) 1709
PleI GAGTC 6 cut(s) 301, 838, 1235, 1356, 1405, 1579
PpsI GAGTC 6 cut(s) 301, 838, 1235, 1356, 1405, 1579
PpuMI RGGWCCY 1 cut(s) 728
PscI ACATGT 1 cut(s) 933
Psp5II RGGWCCY 1 cut(s) 728
Psp6I CCWGG 1 cut(s) 1483
PspEI GGTNACC 1 cut(s) 1490
PspGI CCWGG 1 cut(s) 1483
PspN4I GGNNCC 2 cut(s) 730, 1310
PspPI GGNCC 3 cut(s) 728, 1033, 1508
PspPPI RGGWCCY 1 cut(s) 728
PspXI VCTCGAGB 1 cut(s) 470
PstI CTGCAG 2 cut(s) 760, 865
PstNI CAGNNNCTG 2 cut(s) 296, 827
PsuI RGATCY 1 cut(s) 1108
PsyI GACNNNGTC 2 cut(s) 292, 1588
PvuII CAGCTG 1 cut(s) 20
RsaI GTAC 5 cut(s) 620, 938, 987, 1669, 1828
RsaNI GTAC 5 cut(s) 619, 937, 986, 1668, 1827
RseI CAYNNNNRTG 3 cut(s) 414, 576, 981
SaqAI TTAA 7 cut(s) 126, 137, 339, 585, 782, 1133, 1649
Sau3AI GATC 6 cut(s) 30, 208, 568, 1108, 1186, 1513
Sau96I GGNCC 3 cut(s) 728, 1033, 1508
ScaI AGTACT 1 cut(s) 1828
SchI GAGTC 6 cut(s) 302, 838, 1236, 1357, 1406, 1579
ScrFI CCNGG 2 cut(s) 1013, 1485
SfaNI GCATC 3 cut(s) 178, 324, 833
SfcI CTRYAG 2 cut(s) 756, 861
Sfr274I CTCGAG 1 cut(s) 470
SinI GGWCC 2 cut(s) 728, 1033
SlaI CTCGAG 1 cut(s) 470
SmiMI CAYNNNNRTG 3 cut(s) 414, 576, 981
SmlI CTYRAG 3 cut(s) 136, 470, 797
SmoI CTYRAG 3 cut(s) 136, 470, 797
SsiI CCGC 9 cut(s) 141, 167, 352, 378, 401, 562, 647, 1163, 1861
SspI AATATT 1 cut(s) 184
SspMI CTAG 5 cut(s) 597, 815, 836, 1224, 1268
StyD4I CCNGG 2 cut(s) 1011, 1483
StyI CCWWGG 2 cut(s) 724, 1112
TaaI ACNGT 6 cut(s) 247, 770, 1019, 1043, 1456, 1480
TaiI ACGT 2 cut(s) 418, 498
TaqI TCGA 4 cut(s) 471, 567, 699, 1230
TatI WGTACW 4 cut(s) 618, 936, 985, 1826
TauI GCSGC 4 cut(s) 144, 170, 355, 404
Tru1I TTAA 7 cut(s) 126, 137, 339, 585, 782, 1133, 1649
Tru9I TTAA 7 cut(s) 126, 137, 339, 585, 782, 1133, 1649
TscAI CASTG 8 cut(s) 90, 283, 564, 922, 1222, 1304, 1483, 1632
TseFI GTSAC 2 cut(s) 1376, 1388
Tsp45I GTSAC 2 cut(s) 1376, 1388
TspDTI ATGAA 7 cut(s) 17, 789, 842, 944, 1092, 1632, 1731
TspGWI ACGGA 2 cut(s) 41, 426
TspRI CASTG 8 cut(s) 90, 283, 564, 922, 1222, 1304, 1483, 1632
Tth111I GACNNNGTC 2 cut(s) 292, 1588
Vha464I CTTAAG 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 728, 1033
XapI RAATTY 2 cut(s) 1208, 1330
XbaI TCTAGA 1 cut(s) 1223
XceI RCATGY 2 cut(s) 937, 980
XcmI CCANNNNNNNNNTGG 1 cut(s) 731
XhoI CTCGAG 1 cut(s) 470
XmiI GTMKAC 1 cut(s) 498
XmnI GAANNNNTTC 1 cut(s) 1291
XspI CTAG 5 cut(s) 597, 815, 836, 1224, 1268
ZrmI AGTACT 1 cut(s) 1828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.