Rh7DG281200

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000489
Physical Location & Seq
Forward (+)
30384943 .. 30387763
2821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG281200.1

Sequence Viewer

Length: 1914 bp
ATGAATCCCTCTGATTCAGCTGAGACAGAGAGTAGTCCAACATCGGCCTATCATGCCACGATATTGGAGGAGACCAACGCAATGTTCTATTCTGAATGGAACCAGCCAAAATCTATACCAGTCAAGAAAAGCTTAAGCGGCATGGATACTAAGGTGTTCAAGGCGGCACGAGAGGGCAATATTGATGGCCTTAGAGAACATAGTGATTATCTTCACCAGATACTGACTCCAACCAAAAACACAGTCCTCCATGTCTATATAGCTTGCGTAGGCAGTGCAAGGTTGACAAAGTCTGAAGAATTGCTGAAGTCAGCCGAGGCTGTAAGGGAGATGCTTAAAATGTGCCAGCGGCTACTATTGCAGCCAAACGAGAGCGGTGATACTGTCTTACACTTAGCGGCAAGACACGGACGTGCTGACATAGTTGGAGTTCTTATTCAGGCTGCAAAAGACTGGCATGGTGACCTCGAGGAAGGTATCACATCAAAAGAAGTATGCTACCAGTTTCTCATAAGAAGACGTAACGAGGAGAAAAACACAGCCTTGCACGAGGCAGTGCTGTTTAATCATCTAGATGTGGTAAAGATATTGACTGGGGAAGACCCTGAGTTTTTGTACTCTGCTAATGATGCTGGCGAAACTCCAGTATACATGGCTGCCGAAAGAGGATATCGCGAATTGGTTTTTGAAATCCTTGACACCTGCACAAGTTCATCCTACCAAGGACCCGATGGTTTAACAGCTCTACACGTTGCAGCTGCCTACGGTCATGATCAAATAACGAGAAGACTACTAGAGAAGGAAATGACGCTAGCAACAGCAGCAAACGGAGAAGGATATACTCCACTTCATATGGCTGCATGTAGAGGTCACGTTTCAATTGTGAAACAAATACTTGAATGTGACAAGTCCACTGCCTACATTGGCGACATTATTTACAAGATGACACCCGTTCACCTTGCAGCGTATACAGGGCATGTAGATGTACTGAAACAGCTTATTTTCTACTGCCCTGACAGTTTCGAATTGGTGGACAGTGAAGGTGTCAACGCCCTACATTTTGCAATTATTGGTAATAAATATAAAGTAGAAGAGTTTGTTCGAAAAGATCCATGGCTTAGTAGTGTCCTTTTAAATAGCAAAGATTCTGTCGGGAACACACCTCTCCATCTAATTGCTGCTTCTGAAAAATACGAAGGCTTGAAATTTATCAGTGATTCGAGAGTTGATAAGATGGCATTCAACAAAAAAAATAAGAACGCGTTAGACATCATTCTAAAGAGCACGAATTCTCCGTGGAACCGGAAGATCATAAATCTCTACGAAGGTTTGAAAAAGTCTGGTGCAAGAGTAGGTCAACGTATGTCAAGAGACAAAGATGGTGGCACGAAAAATCATGCCAGTAAAGGTGACAAAGAGTCAAAATTCAAGGAACTAAAAGAATCTCATTTGGTAGTGTCTGCACTCATAGCAACTGTAACCTTCGCAGCAGGCTTCACTGTGCCTGGTGGTTATCAAAGTGAAAAAGGGTCGGATCAAGGTTTTGCAGTTCTATCAAGAAATGCAGCTTTCAAAGCATTTGTGATAACAAATACATTAGCCATGACACTGTCCAGTTGTGCCGTCATGATACGCCTTTTCTTGTCGTACCCACAGGGGCCAAGTTCATTACCTCAGCCAATAATTAGTTGTACATTTTACGCCCTAATTGCAATGCTGGCTGCATTCCTTACCGGTACATATGCAGTATTAGGTGGCCGTTCTTCATTAGGACTTGCTATTGCGGTTTGTGTGCTCGGCAGCGTCTTCTTCCTGGTTTTGAGTTTTGTTTCCAGTTATTCAGCTTTCAAAACTTTTCCTAAGCGTGCCTCTCATGTCCGAATACAGATAGTCAAACGTAGGTCTGCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

637

Amino Acids

70.12

Weight (kDa)

8.46

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 110 - 198 8.9e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 170 - 232 2e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 218 - 302 9.4e-15 Ankyrin repeats (3 copies)
Ank_4 PF13637 249 - 296 2.7e-08 Ankyrin repeats (many copies)
PGG PF13962 475 - 583 7.8e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 710
AbsI CCTCGAGG 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 710
AccBSI CCGCTC 1 cut(s) 375
AccI GTMKAC 2 cut(s) 648, 968
AccII CGCG 2 cut(s) 675, 1262
AciI CCGC 6 cut(s) 138, 164, 349, 375, 398, 1784
AclWI GGATC 2 cut(s) 1103, 1542
AcoI YGGCCR 1 cut(s) 1756
AcsI RAATTY 3 cut(s) 1205, 1288, 1424
AcuI CTGAAG 2 cut(s) 315, 326
AfaI GTAC 5 cut(s) 617, 987, 1649, 1693, 1738
AflII CTTAAG 1 cut(s) 133
AflIII ACRYGT 2 cut(s) 748, 1260
AgeI ACCGGT 1 cut(s) 1733
AhdI GACNNNNNGTC 1 cut(s) 1417
AjiI CACGTC 1 cut(s) 413
AjnI CCWGG 2 cut(s) 1504, 1812
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AleI CACNNNNGTG 1 cut(s) 411
AluBI AGCT 8 cut(s) 20, 132, 263, 743, 758, 997, 1568, 1844
AluI AGCT 8 cut(s) 20, 132, 263, 743, 758, 997, 1568, 1844
Alw21I GWGCWC 2 cut(s) 1286, 1797
Alw26I GTCTC 3 cut(s) 17, 65, 1365
AlwI GGATC 2 cut(s) 1103, 1542
AlwNI CAGNNNCTG 1 cut(s) 223
Ama87I CYCGRG 1 cut(s) 467
AoxI GGCC 4 cut(s) 45, 187, 1658, 1756
ApoI RAATTY 3 cut(s) 1205, 1288, 1424
ArsI GACNNNNNNTTYG 4 cut(s) 228, 260, 1134, 1166
AsiGI ACCGGT 1 cut(s) 1733
AspS9I GGNCC 2 cut(s) 725, 1658
AsuHPI GGTGA 5 cut(s) 206, 389, 473, 947, 1421
AsuII TTCGAA 2 cut(s) 1023, 1102
AsuNHI GCTAGC 1 cut(s) 811
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 1 cut(s) 725
BaeI ACNNNNGTAYC 2 cut(s) 138, 171
BauI CACGAG 2 cut(s) 168, 548
BbsI GAAGAC 4 cut(s) 523, 606, 793, 1798
Bbv12I GWGCWC 2 cut(s) 1286, 1797
BbvCI CCTCAGC 1 cut(s) 1674
BccI CCATC 5 cut(s) 179, 725, 1176, 1228, 1373
BceAI ACGGC 2 cut(s) 1607, 1743
BciT130I CCWGG 2 cut(s) 1506, 1814
BciVI GTATCC 1 cut(s) 139
BclI TGATCA 1 cut(s) 772
BcoDI GTCTC 3 cut(s) 17, 65, 1365
BfaI CTAG 3 cut(s) 572, 794, 812
BfrI CTTAAG 1 cut(s) 133
BfuAI ACCTGC 1 cut(s) 710
BfuI GTATCC 1 cut(s) 139
Bme1390I CCNGG 2 cut(s) 1506, 1814
Bme18I GGWCC 1 cut(s) 725
BmeRI GACNNNNNGTC 1 cut(s) 1417
BmeT110I CYCGRG 1 cut(s) 467
BmgBI CACGTC 1 cut(s) 413
BmgT120I GGNCC 2 cut(s) 725, 1658
BmiI GGNNCC 4 cut(s) 101, 727, 1301, 1659
BmrFI CCNGG 2 cut(s) 1506, 1814
BmrI ACTGGG 1 cut(s) 603
BmsI GCATC 2 cut(s) 321, 619
BmtI GCTAGC 1 cut(s) 815
BmuI ACTGGG 1 cut(s) 603
BpiI GAAGAC 4 cut(s) 523, 606, 793, 1798
BpmI CTGGAG 1 cut(s) 627
Bpu10I CCTNAGC 2 cut(s) 1674, 1860
Bpu14I TTCGAA 2 cut(s) 1023, 1102
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 4 cut(s) 315, 721, 1112, 1295
BsaWI WCCGGW 2 cut(s) 1302, 1733
BsaXI ACNNNNNCTCC 2 cut(s) 1276, 1306
Bse118I RCCGGY 1 cut(s) 1733
Bse1I ACTGG 8 cut(s) 119, 458, 502, 598, 644, 1401, 1614, 1833
Bse3DI GCAATG 2 cut(s) 87, 1719
BseBI CCWGG 2 cut(s) 1506, 1814
BseDI CCNNGG 4 cut(s) 315, 721, 1112, 1295
BseGI GGATG 1 cut(s) 713
BseMI GCAATG 2 cut(s) 87, 1719
BseMII CTCAG 3 cut(s) 12, 597, 1688
BseNI ACTGG 8 cut(s) 119, 458, 502, 598, 644, 1401, 1614, 1833
BseRI GAGGAG 2 cut(s) 83, 542
BsgI GTGCAG 2 cut(s) 688, 1446
Bsh1236I CGCG 2 cut(s) 675, 1262
BshFI GGCC 4 cut(s) 47, 189, 1660, 1758
BshTI ACCGGT 1 cut(s) 1733
BsiHKAI GWGCWC 2 cut(s) 1286, 1797
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 2 cut(s) 1303, 1734
BsmAI GTCTC 3 cut(s) 17, 65, 1365
BsmI GAATGC 2 cut(s) 1238, 1724
BsnI GGCC 4 cut(s) 47, 189, 1660, 1758
Bso31I GGTCTC 1 cut(s) 65
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 2 cut(s) 1023, 1102
Bsp1286I GDGCHC 2 cut(s) 1286, 1797
Bsp1407I TGTACA 1 cut(s) 1691
Bsp143I GATC 4 cut(s) 772, 1108, 1308, 1534
Bsp19I CCATGG 1 cut(s) 1112
Bsp68I TCGCGA 1 cut(s) 675
BspACI CCGC 6 cut(s) 138, 164, 349, 375, 398, 1784
BspANI GGCC 4 cut(s) 47, 189, 1660, 1758
BspCNI CTCAG 3 cut(s) 13, 598, 1687
BspFNI CGCG 2 cut(s) 675, 1262
BspHI TCATGA 2 cut(s) 769, 1626
BspLI GGNNCC 4 cut(s) 101, 727, 1301, 1659
BspMI ACCTGC 1 cut(s) 710
BspOI GCTAGC 1 cut(s) 815
BspPI GGATC 2 cut(s) 1103, 1542
BspT104I TTCGAA 2 cut(s) 1023, 1102
BspTI CTTAAG 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 65
BsrBI CCGCTC 1 cut(s) 375
BsrDI GCAATG 2 cut(s) 87, 1719
BsrFI RCCGGY 1 cut(s) 1733
BsrGI TGTACA 1 cut(s) 1691
BsrI ACTGG 8 cut(s) 119, 458, 502, 598, 644, 1401, 1614, 1833
BssAI RCCGGY 1 cut(s) 1733
BssECI CCNNGG 4 cut(s) 315, 721, 1112, 1295
BssMI GATC 4 cut(s) 772, 1108, 1308, 1534
BssNAI GTATAC 2 cut(s) 649, 969
BssSI CACGAG 2 cut(s) 168, 548
BssT1I CCWWGG 2 cut(s) 721, 1112
Bst1107I GTATAC 2 cut(s) 649, 969
Bst2BI CACGAG 2 cut(s) 168, 548
Bst2UI CCWGG 2 cut(s) 1506, 1814
Bst4CI ACNGT 8 cut(s) 244, 385, 767, 1019, 1037, 1477, 1501, 1611
Bst6I CTCTTC 1 cut(s) 1086
BstAFI CTTAAG 1 cut(s) 133
BstAUI TGTACA 1 cut(s) 1691
BstBI TTCGAA 2 cut(s) 1023, 1102
BstC8I GCNNGC 7 cut(s) 265, 347, 634, 813, 1492, 1719, 1866
BstDEI CTNAG 9 cut(s) 21, 150, 191, 394, 606, 1118, 1674, 1860, 1911
BstDSI CCRYGG 2 cut(s) 1112, 1295
BstEII GGTNACC 1 cut(s) 461
BstF5I GGATG 1 cut(s) 713
BstFNI CGCG 2 cut(s) 675, 1262
BstKTI GATC 4 cut(s) 775, 1111, 1311, 1537
BstMAI GTCTC 3 cut(s) 17, 65, 1365
BstMBI GATC 4 cut(s) 772, 1108, 1308, 1534
BstMWI GCNNNNNNNGC 9 cut(s) 53, 138, 358, 629, 821, 1469, 1574, 1709, 1718
BstNI CCWGG 2 cut(s) 1506, 1814
BstNSI RCATGY 2 cut(s) 864, 980
BstPI GGTNACC 1 cut(s) 461
BstSCI CCNGG 2 cut(s) 1504, 1812
BstUI CGCG 2 cut(s) 675, 1262
BstV2I GAAGAC 4 cut(s) 523, 606, 793, 1798
BstX2I RGATCY 1 cut(s) 1108
BstXI CCANNNNNNTGG 1 cut(s) 64
BstYI RGATCY 1 cut(s) 1108
BstZ17I GTATAC 2 cut(s) 649, 969
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 4 cut(s) 47, 189, 1660, 1758
BtgI CCRYGG 2 cut(s) 1112, 1295
BtrI CACGTC 1 cut(s) 413
BtsCI GGATG 1 cut(s) 713
BtsI GCAGTG 3 cut(s) 280, 561, 912
BtsIMutI CAGTG 7 cut(s) 280, 561, 912, 1042, 1219, 1497, 1607
BtuMI TCGCGA 1 cut(s) 675
BveI ACCTGC 1 cut(s) 710
Cac8I GCNNGC 7 cut(s) 265, 347, 634, 813, 1492, 1719, 1866
CaiI CAGNNNCTG 1 cut(s) 223
CciI TCATGA 2 cut(s) 769, 1626
Cfr10I RCCGGY 1 cut(s) 1733
Cfr13I GGNCC 2 cut(s) 725, 1658
CseI GACGC 2 cut(s) 817, 1792
Csp6I GTAC 5 cut(s) 616, 986, 1648, 1692, 1737
CspAI ACCGGT 1 cut(s) 1733
CspCI CAANNNNNGTGG 2 cut(s) 1363, 1398
CviQI GTAC 5 cut(s) 616, 986, 1648, 1692, 1737
DdeI CTNAG 9 cut(s) 21, 150, 191, 394, 606, 1118, 1674, 1860, 1911
DpnI GATC 4 cut(s) 774, 1110, 1310, 1536
DpnII GATC 4 cut(s) 772, 1108, 1308, 1534
DraI TTTAAA 1 cut(s) 1134
DriI GACNNNNNGTC 1 cut(s) 1417
EaeI YGGCCR 1 cut(s) 1756
Eam1104I CTCTTC 1 cut(s) 1086
Eam1105I GACNNNNNGTC 1 cut(s) 1417
EarI CTCTTC 1 cut(s) 1086
Eco130I CCWWGG 2 cut(s) 721, 1112
Eco31I GGTCTC 1 cut(s) 65
Eco32I GATATC 1 cut(s) 671
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 2 cut(s) 315, 326
Eco88I CYCGRG 1 cut(s) 467
Eco91I GGTNACC 1 cut(s) 461
EcoO109I RGGNCCY 1 cut(s) 725
EcoO65I GGTNACC 1 cut(s) 461
EcoRI GAATTC 1 cut(s) 1288
EcoRII CCWGG 2 cut(s) 1504, 1812
EcoRV GATATC 1 cut(s) 671
EcoT14I CCWWGG 2 cut(s) 721, 1112
ErhI CCWWGG 2 cut(s) 721, 1112
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FauNDI CATATG 2 cut(s) 852, 1741
FbaI TGATCA 1 cut(s) 772
FblI GTMKAC 2 cut(s) 648, 968
FokI GGATG 1 cut(s) 700
FspBI CTAG 3 cut(s) 572, 794, 812
GsuI CTGGAG 1 cut(s) 627
HaeIII GGCC 4 cut(s) 47, 189, 1660, 1758
HapII CCGG 2 cut(s) 1303, 1734
HgaI GACGC 2 cut(s) 817, 1792
HincII GTYRAC 3 cut(s) 285, 1048, 1358
HindII GTYRAC 3 cut(s) 285, 1048, 1358
HindIII AAGCTT 1 cut(s) 130
HinfI GANTC 7 cut(s) 4, 14, 226, 1145, 1217, 1418, 1442
HpaII CCGG 2 cut(s) 1303, 1734
HphI GGTGA 5 cut(s) 206, 389, 473, 947, 1421
Hpy166II GTNNAC 8 cut(s) 285, 649, 912, 955, 969, 1033, 1048, 1358
Hpy188I TCNGA 6 cut(s) 13, 94, 295, 1186, 1534, 1880
Hpy188III TCNNGA 9 cut(s) 124, 572, 674, 770, 1153, 1221, 1368, 1557, 1627
Hpy8I GTNNAC 8 cut(s) 285, 649, 912, 955, 969, 1033, 1048, 1358
HpyAV CCTTC 7 cut(s) 467, 793, 827, 1034, 1190, 1319, 1492
HpyCH4III ACNGT 8 cut(s) 244, 385, 767, 1019, 1037, 1477, 1501, 1611
HpyCH4IV ACGT 6 cut(s) 412, 520, 750, 873, 1360, 1897
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 138, 358, 629, 821, 1469, 1574, 1709, 1718
HpyF3I CTNAG 9 cut(s) 21, 150, 191, 394, 606, 1118, 1674, 1860, 1911
HpySE526I ACGT 6 cut(s) 412, 520, 750, 873, 1360, 1897
Ksp22I TGATCA 1 cut(s) 772
Kzo9I GATC 4 cut(s) 772, 1108, 1308, 1534
LweI GCATC 2 cut(s) 321, 619
MaeI CTAG 3 cut(s) 572, 794, 812
MaeII ACGT 6 cut(s) 412, 520, 750, 873, 1360, 1897
MaeIII GTNAC 6 cut(s) 461, 521, 869, 902, 1409, 1477
MalI GATC 4 cut(s) 774, 1110, 1310, 1536
MbiI CCGCTC 1 cut(s) 375
MboI GATC 4 cut(s) 772, 1108, 1308, 1534
MfeI CAATTG 1 cut(s) 879
MflI RGATCY 1 cut(s) 1108
MhlI GDGCHC 2 cut(s) 1286, 1797
MluI ACGCGT 1 cut(s) 1260
MlyI GAGTC 2 cut(s) 220, 1427
MmeI TCCRAC 4 cut(s) 62, 254, 406, 1512
MseI TTAA 5 cut(s) 134, 336, 564, 737, 1133
MslI CAYNNNNRTG 3 cut(s) 411, 573, 981
MspA1I CMGCKG 3 cut(s) 20, 349, 758
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 2 cut(s) 1303, 1734
MspR9I CCNGG 2 cut(s) 1506, 1814
MunI CAATTG 1 cut(s) 879
Mva1269I GAATGC 2 cut(s) 1238, 1724
MvaI CCWGG 2 cut(s) 1506, 1814
MvnI CGCG 2 cut(s) 675, 1262
MwoI GCNNNNNNNGC 9 cut(s) 53, 138, 358, 629, 821, 1469, 1574, 1709, 1718
NcoI CCATGG 1 cut(s) 1112
NdeI CATATG 2 cut(s) 852, 1741
NdeII GATC 4 cut(s) 772, 1108, 1308, 1534
NheI GCTAGC 1 cut(s) 811
NlaIV GGNNCC 4 cut(s) 101, 727, 1301, 1659
NmeAIII GCCGAG 2 cut(s) 340, 1776
NmuCI GTSAC 4 cut(s) 461, 869, 902, 1409
NruI TCGCGA 1 cut(s) 675
NspI RCATGY 2 cut(s) 864, 980
NspV TTCGAA 2 cut(s) 1023, 1102
OliI CACNNNNGTG 1 cut(s) 411
PaeR7I CTCGAG 1 cut(s) 467
PagI TCATGA 2 cut(s) 769, 1626
PaqCI CACCTGC 1 cut(s) 710
PcsI WCGNNNNNNNCGW 1 cut(s) 1292
PctI GAATGC 2 cut(s) 1238, 1724
PfeI GAWTC 5 cut(s) 4, 14, 1145, 1217, 1442
PflFI GACNNNGTC 2 cut(s) 289, 1609
PinAI ACCGGT 1 cut(s) 1733
PleI GAGTC 2 cut(s) 220, 1426
PpsI GAGTC 2 cut(s) 220, 1426
PpuMI RGGWCCY 1 cut(s) 725
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 2 cut(s) 1504, 1812
PspEI GGTNACC 1 cut(s) 461
PspGI CCWGG 2 cut(s) 1504, 1812
PspN4I GGNNCC 4 cut(s) 101, 727, 1301, 1659
PspPI GGNCC 2 cut(s) 725, 1658
PspPPI RGGWCCY 1 cut(s) 725
PspXI VCTCGAGB 1 cut(s) 467
PstNI CAGNNNCTG 1 cut(s) 223
PsuI RGATCY 1 cut(s) 1108
PsyI GACNNNGTC 2 cut(s) 289, 1609
PvuII CAGCTG 2 cut(s) 20, 758
RruI TCGCGA 1 cut(s) 675
RsaI GTAC 5 cut(s) 617, 987, 1649, 1693, 1738
RsaNI GTAC 5 cut(s) 616, 986, 1648, 1692, 1737
RseI CAYNNNNRTG 3 cut(s) 411, 573, 981
SaqAI TTAA 5 cut(s) 134, 336, 564, 737, 1133
Sau3AI GATC 4 cut(s) 772, 1108, 1308, 1534
Sau96I GGNCC 2 cut(s) 725, 1658
SchI GAGTC 2 cut(s) 220, 1427
ScrFI CCNGG 2 cut(s) 1506, 1814
SduI GDGCHC 2 cut(s) 1286, 1797
SfaNI GCATC 2 cut(s) 321, 619
Sfr274I CTCGAG 1 cut(s) 467
SfuI TTCGAA 2 cut(s) 1023, 1102
SinI GGWCC 1 cut(s) 725
SlaI CTCGAG 1 cut(s) 467
SmiMI CAYNNNNRTG 3 cut(s) 411, 573, 981
SmlI CTYRAG 2 cut(s) 133, 467
SmoI CTYRAG 2 cut(s) 133, 467
SsiI CCGC 6 cut(s) 138, 164, 349, 375, 398, 1784
SspI AATATT 1 cut(s) 181
SspMI CTAG 3 cut(s) 572, 794, 812
StyD4I CCNGG 2 cut(s) 1504, 1812
StyI CCWWGG 2 cut(s) 721, 1112
TaaI ACNGT 8 cut(s) 244, 385, 767, 1019, 1037, 1477, 1501, 1611
TaiI ACGT 6 cut(s) 415, 523, 753, 876, 1363, 1900
TaqI TCGA 4 cut(s) 468, 1023, 1102, 1220
TatI WGTACW 3 cut(s) 615, 985, 1691
TauI GCSGC 4 cut(s) 141, 167, 352, 401
TfiI GAWTC 5 cut(s) 4, 14, 1145, 1217, 1442
Tru1I TTAA 5 cut(s) 134, 336, 564, 737, 1133
Tru9I TTAA 5 cut(s) 134, 336, 564, 737, 1133
TscAI CASTG 7 cut(s) 280, 561, 919, 1042, 1219, 1504, 1614
TseFI GTSAC 4 cut(s) 461, 869, 902, 1409
Tsp45I GTSAC 4 cut(s) 461, 869, 902, 1409
TspDTI ATGAA 5 cut(s) 17, 702, 839, 1656, 1755
TspGWI ACGGA 3 cut(s) 423, 843, 1284
TspRI CASTG 7 cut(s) 280, 561, 919, 1042, 1219, 1504, 1614
Tth111I GACNNNGTC 2 cut(s) 289, 1609
Vha464I CTTAAG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 725
XapI RAATTY 3 cut(s) 1205, 1288, 1424
XbaI TCTAGA 1 cut(s) 571
XceI RCATGY 2 cut(s) 864, 980
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XhoI CTCGAG 1 cut(s) 467
XmiI GTMKAC 2 cut(s) 648, 968
XspI CTAG 3 cut(s) 572, 794, 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.