Rw0G001860

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00058
OG0000489
Physical Location & Seq
Reverse (-)
19351 .. 25108
5758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G001860.1

Sequence Viewer

Length: 1947 bp
ATGAATCCCTCTAATTCAGCTGAGATCGAGATTAGTGGTCCAACATCGGCCTATCATGCCACGATATTGGAGGAGACCAATGCAGTGTTCCGTTCTGAATGGAATCAGCAGAAATCTACACCAGTCAAGAGAAGCTTAAGCGGCATGGATACTAAGGTGTTCAAGGCGGCACGAGAGGGCAATATTGATGCCCTTAGAGAACATAGTGATCATCTTCACCAACAATTGACTCCAACCAAAAACACAGTCCTCCATGTCTATATAGCTTGCGTAGGCAGTGCAAGGTTGACCGAGTCTAAAGAATTGCTGAAGTCAGCCGAGGTTGTAAGGGAGATGCTTAAAATGTGCCAGCGGCTACTATTGCACCCAAACGAGAGCGGTGATACTGCCTTACACTTGGCGGCAAGACACGGACGTGATGACATAGTTGGAGTTCTTATTCATGCGGCGAAAGGCTGGCATGGCGACCTCGAGGAAGGTATCTCATCAAAAGAAGAATGCTACCAGTTTCTCATCAGAAGACCTAACAAGGAGAAAAACACAGCCTTGCACGAGGCAGTGCGATTTAATAATCTAGATGTGGTAAAGATATTGACTAGGGAAGACCCCGAGTTTTTGTACTCTGCTAATGATGCTGGGCAAACTCCACTCTACATGGCTGCCGAGAGGGGATATTCCGAATTGGTTTTTGAAATGCTCGAAACTTGCACGAATCCATCTTACCAAGGGCCCGATGGTTTAACAGCTTTACACGTTGCAGCTGCCTACGGTTATGAAACAATAACGAGAAGACTACTACAGAAGGAAATGACGCTAGCAATAGCAACGGAGAGAAACGGAAATACTCCACTTCATATGGCTGCATTAAGGGGTCATGTTTTACCTGTGAAACGAATACTGGAATTTGATAAGTCCCCTGCCTACATTGGCAACAGATACGAGATGACACCCGTTCACCTTGCAGCTTGTTCAGGGAGTGTAGGTGTACTCGAACAGCTTATTTTCGACTGCCCTGACAGTTTTGAATTGGTGGACCATAAGGGTCGCAATGCCCTACATTTGGCCATTATCAATAATGAATATAAAGTAGAAGAGTTTGTTCGAAAAGATCCATGGCTCAGTAGCGTCCTTTTAAATGGCAAAGATTCTGTCGGAAACACACCTCTCCATCAAATTGCTACTTCTCAACGATACGATGGCTTTTATTTTGTCAGTGATTATAGAGTTGATAAAATGGCAGTCAACAAAGAAAATATGAATGCGGTAGACATAATTCAACAAAATGTTCGAAAAAAAGAAAAAGACAGCATCCTAGAGTTTACTACTTTTCGATGGATGAATAATCTCTTAAGAGGTTTGCAAAAGTCTGGTGCAAGAGCTGGTGAACGACTACCAAGAGACGATGGTGATGGCAGAAAAGTCAAAATTGACCTAGAGAATAGATACAAGGAAGTAAAAAAATCTCATTTGGTAATGTGCACACTCATAGCAACTGTGACCTTCGCAGCAGGATTCACTGTTCCTGGTGGTTATCAAAATGAAAAAGGGCCAGATCAAGGTTTTGCAGTTCTATCAAAAAATGCAGCTTTTCAGGCATTTGTGATAACAAATACATTAGCCATGACTATGTCCAGTTGTGCCACCATGATACGCCTTTTCTTGTCGCTAAAAGGGAAGCCTCATGGATCACACTCATTTAATGTGGCTTTAGGTCTTACCAACAATGCATTGATTGCTATGGTGGTTGCATACCTTACTGGTACATATGCAGTATTAGGACATCATTCTTCATTAGGACTAGCCATCGGGGTTTGTGGTATTGCCTGCTATTTTTTGGTTCATGGTTTTCTTGTTACTTCTCCACGTTACCTTGGTTCTCGTATGCATAGCTATAAGCGCAACCACCGCACACTTTTCCGCCTATTGGAATATTACTTTTACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

648

Amino Acids

72.54

Weight (kDa)

8.48

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 55 - 149 3.6e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 210 - 269 9.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 217 - 300 2.6e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 250 - 293 2.1e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 278 - 334 9.7e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 319 - 410 3.8e-07 Ankyrin repeats (3 copies)
PGG PF13962 480 - 591 1.6e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 470
AccBSI CCGCTC 1 cut(s) 378
AccI GTMKAC 1 cut(s) 1266
AciI CCGC 9 cut(s) 141, 167, 352, 378, 401, 446, 1262, 1906, 1918
AclWI GGATC 2 cut(s) 1103, 1693
AcoI YGGCCR 1 cut(s) 1062
AcsI RAATTY 1 cut(s) 902
AcuI CTGAAG 1 cut(s) 329
AfaI GTAC 3 cut(s) 620, 987, 1762
AfiI CCNNNNNNNGG 3 cut(s) 1060, 1556, 1924
AflII CTTAAG 2 cut(s) 136, 1348
AflIII ACRYGT 1 cut(s) 751
AgsI TTSAA 4 cut(s) 163, 692, 1025, 1277
AjiI CACGTC 1 cut(s) 416
AjnI CCWGG 1 cut(s) 1522
AjuI GAANNNNNNNTTGG 2 cut(s) 71, 103
AleI CACNNNNGTG 1 cut(s) 414
AloI GAACNNNNNNTCC 2 cut(s) 1503, 1535
Alw21I GWGCWC 1 cut(s) 1481
Alw26I GTCTC 2 cut(s) 68, 1392
Alw44I GTGCAC 1 cut(s) 1477
AlwI GGATC 2 cut(s) 1103, 1693
Ama87I CYCGRG 2 cut(s) 470, 608
AoxI GGCC 4 cut(s) 48, 728, 1062, 1547
ApaI GGGCCC 1 cut(s) 732
ApaLI GTGCAC 1 cut(s) 1477
ApeKI GCWGC 7 cut(s) 659, 758, 761, 860, 962, 1505, 1583
ApoI RAATTY 1 cut(s) 902
ArsI GACNNNNNNTTYG 4 cut(s) 231, 263, 1134, 1166
AspLEI GCGC 1 cut(s) 1899
AspS9I GGNCC 5 cut(s) 38, 728, 729, 1033, 1547
AsuHPI GGTGA 5 cut(s) 209, 392, 947, 1394, 1418
AsuII TTCGAA 2 cut(s) 1102, 1288
AsuNHI GCTAGC 1 cut(s) 814
AvaI CYCGRG 2 cut(s) 470, 608
AvaII GGWCC 2 cut(s) 38, 1033
BaeGI GKGCMC 2 cut(s) 732, 1481
BaeI ACNNNNGTAYC 2 cut(s) 141, 174
BalI TGGCCA 1 cut(s) 1064
BanII GRGCYC 1 cut(s) 732
BauI CACGAG 2 cut(s) 171, 551
BbsI GAAGAC 3 cut(s) 526, 609, 796
Bbv12I GWGCWC 1 cut(s) 1481
BbvI GCAGC 7 cut(s) 646, 748, 770, 847, 974, 1517, 1595
BccI CCATC 8 cut(s) 724, 728, 1176, 1190, 1326, 1397, 1403, 1811
BciT130I CCWGG 1 cut(s) 1524
BciVI GTATCC 1 cut(s) 142
BclI TGATCA 1 cut(s) 208
BcoDI GTCTC 2 cut(s) 68, 1392
BfaI CTAG 6 cut(s) 575, 597, 815, 1313, 1433, 1799
BfmI CTRYAG 1 cut(s) 797
BfrI CTTAAG 2 cut(s) 136, 1348
BfuI GTATCC 1 cut(s) 142
Bme1390I CCNGG 1 cut(s) 1524
Bme18I GGWCC 2 cut(s) 38, 1033
BmeT110I CYCGRG 2 cut(s) 470, 608
BmgBI CACGTC 1 cut(s) 416
BmgT120I GGNCC 5 cut(s) 38, 728, 729, 1033, 1547
BmiI GGNNCC 1 cut(s) 730
BmrFI CCNGG 1 cut(s) 1524
BmsI GCATC 4 cut(s) 178, 324, 622, 1317
BmtI GCTAGC 1 cut(s) 818
BpiI GAAGAC 3 cut(s) 526, 609, 796
Bpu14I TTCGAA 2 cut(s) 1102, 1288
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 4 cut(s) 318, 724, 1112, 1870
BsaXI ACNNNNNCTCC 2 cut(s) 967, 997
Bsc4I CCNNNNNNNGG 3 cut(s) 1060, 1556, 1924
Bse1I ACTGG 5 cut(s) 122, 505, 903, 1632, 1762
Bse3DI GCAATG 1 cut(s) 1054
BseBI CCWGG 1 cut(s) 1524
BseDI CCNNGG 4 cut(s) 318, 724, 1112, 1870
BseGI GGATG 2 cut(s) 1308, 1341
BseLI CCNNNNNNNGG 3 cut(s) 1060, 1556, 1924
BseMI GCAATG 1 cut(s) 1054
BseMII CTCAG 2 cut(s) 12, 1132
BseNI ACTGG 5 cut(s) 122, 505, 903, 1632, 1762
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 2 cut(s) 732, 1481
BseXI GCAGC 7 cut(s) 646, 748, 770, 847, 974, 1517, 1595
BseYI CCCAGC 1 cut(s) 635
BshFI GGCC 4 cut(s) 50, 730, 1064, 1549
BsiHKAI GWGCWC 1 cut(s) 1481
BsiHKCI CYCGRG 2 cut(s) 470, 608
BslFI GGGAC 1 cut(s) 898
BslI CCNNNNNNNGG 3 cut(s) 1060, 1556, 1924
BsmAI GTCTC 2 cut(s) 68, 1392
BsmBI CGTCTC 1 cut(s) 1392
BsmFI GGGAC 1 cut(s) 898
BsmI GAATGC 2 cut(s) 503, 1264
BsnI GGCC 4 cut(s) 50, 730, 1064, 1549
Bso31I GGTCTC 1 cut(s) 68
BsoBI CYCGRG 2 cut(s) 470, 608
Bsp119I TTCGAA 2 cut(s) 1102, 1288
Bsp120I GGGCCC 1 cut(s) 728
Bsp1286I GDGCHC 2 cut(s) 732, 1481
Bsp143I GATC 5 cut(s) 24, 208, 1108, 1552, 1685
Bsp19I CCATGG 1 cut(s) 1112
BspACI CCGC 9 cut(s) 141, 167, 352, 378, 401, 446, 1262, 1906, 1918
BspANI GGCC 4 cut(s) 50, 730, 1064, 1549
BspCNI CTCAG 2 cut(s) 13, 1131
BspLI GGNNCC 1 cut(s) 730
BspOI GCTAGC 1 cut(s) 818
BspPI GGATC 2 cut(s) 1103, 1693
BspT104I TTCGAA 2 cut(s) 1102, 1288
BspTI CTTAAG 2 cut(s) 136, 1348
BspTNI GGTCTC 1 cut(s) 68
BsrBI CCGCTC 1 cut(s) 378
BsrDI GCAATG 1 cut(s) 1054
BsrI ACTGG 5 cut(s) 122, 505, 903, 1632, 1762
BssECI CCNNGG 4 cut(s) 318, 724, 1112, 1870
BssMI GATC 5 cut(s) 24, 208, 1108, 1552, 1685
BssSI CACGAG 2 cut(s) 171, 551
BssT1I CCWWGG 3 cut(s) 724, 1112, 1870
Bst2BI CACGAG 2 cut(s) 171, 551
Bst2UI CCWGG 1 cut(s) 1524
Bst4CI ACNGT 5 cut(s) 247, 770, 1019, 1495, 1519
Bst6I CTCTTC 1 cut(s) 1086
BstAFI CTTAAG 2 cut(s) 136, 1348
BstAPI GCANNNNNTGC 1 cut(s) 1733
BstBI TTCGAA 2 cut(s) 1102, 1288
BstC8I GCNNGC 5 cut(s) 268, 350, 458, 816, 1825
BstDEI CTNAG 4 cut(s) 21, 153, 194, 1118
BstDSI CCRYGG 1 cut(s) 1112
BstF5I GGATG 2 cut(s) 1308, 1341
BstHHI GCGC 1 cut(s) 1899
BstKTI GATC 5 cut(s) 27, 211, 1111, 1555, 1688
BstMAI GTCTC 2 cut(s) 68, 1392
BstMBI GATC 5 cut(s) 24, 208, 1108, 1552, 1685
BstMWI GCNNNNNNNGC 9 cut(s) 56, 141, 361, 462, 632, 1592, 1733, 1896, 1905
BstNI CCWGG 1 cut(s) 1524
BstSCI CCNGG 1 cut(s) 1522
BstSFI CTRYAG 1 cut(s) 797
BstSLI GKGCMC 2 cut(s) 732, 1481
BstV1I GCAGC 7 cut(s) 646, 748, 770, 847, 974, 1517, 1595
BstV2I GAAGAC 3 cut(s) 526, 609, 796
BstX2I RGATCY 1 cut(s) 1108
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 1 cut(s) 1108
BsuI GTATCC 1 cut(s) 142
BsuRI GGCC 4 cut(s) 50, 730, 1064, 1549
BtgI CCRYGG 1 cut(s) 1112
BtrI CACGTC 1 cut(s) 416
BtsCI GGATG 2 cut(s) 1308, 1341
BtsI GCAGTG 3 cut(s) 90, 283, 564
BtsIMutI CAGTG 5 cut(s) 90, 283, 564, 1219, 1515
Cac8I GCNNGC 5 cut(s) 268, 350, 458, 816, 1825
CfoI GCGC 1 cut(s) 1899
Cfr13I GGNCC 5 cut(s) 38, 728, 729, 1033, 1547
CseI GACGC 2 cut(s) 820, 1114
Csp6I GTAC 3 cut(s) 619, 986, 1761
CviQI GTAC 3 cut(s) 619, 986, 1761
DdeI CTNAG 4 cut(s) 21, 153, 194, 1118
DpnI GATC 5 cut(s) 26, 210, 1110, 1554, 1687
DpnII GATC 5 cut(s) 24, 208, 1108, 1552, 1685
DraI TTTAAA 1 cut(s) 1134
EaeI YGGCCR 1 cut(s) 1062
Eam1104I CTCTTC 1 cut(s) 1086
EarI CTCTTC 1 cut(s) 1086
EciI GGCGGA 1 cut(s) 1907
Eco130I CCWWGG 3 cut(s) 724, 1112, 1870
Eco24I GRGCYC 1 cut(s) 732
Eco31I GGTCTC 1 cut(s) 68
Eco47I GGWCC 2 cut(s) 38, 1033
Eco57I CTGAAG 1 cut(s) 329
Eco88I CYCGRG 2 cut(s) 470, 608
EcoO109I RGGNCCY 1 cut(s) 728
EcoRII CCWGG 1 cut(s) 1522
EcoT14I CCWWGG 3 cut(s) 724, 1112, 1870
EcoT22I ATGCAT 2 cut(s) 1729, 1887
EcoT38I GRGCYC 1 cut(s) 732
ErhI CCWWGG 3 cut(s) 724, 1112, 1870
Esp3I CGTCTC 1 cut(s) 1392
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FaqI GGGAC 1 cut(s) 898
FauNDI CATATG 2 cut(s) 855, 1765
FbaI TGATCA 1 cut(s) 208
FblI GTMKAC 1 cut(s) 1266
FokI GGATG 2 cut(s) 1295, 1348
FriOI GRGCYC 1 cut(s) 732
FspBI CTAG 6 cut(s) 575, 597, 815, 1313, 1433, 1799
GlaI GCGC 1 cut(s) 1898
GsaI CCCAGC 1 cut(s) 639
HaeIII GGCC 4 cut(s) 50, 730, 1064, 1549
HgaI GACGC 2 cut(s) 820, 1114
HhaI GCGC 1 cut(s) 1899
Hin6I GCGC 1 cut(s) 1897
HinP1I GCGC 1 cut(s) 1897
HincII GTYRAC 2 cut(s) 288, 1243
HindII GTYRAC 2 cut(s) 288, 1243
HindIII AAGCTT 1 cut(s) 133
HinfI GANTC 7 cut(s) 4, 103, 229, 293, 712, 1145, 1512
HphI GGTGA 5 cut(s) 209, 392, 947, 1394, 1418
Hpy166II GTNNAC 9 cut(s) 288, 955, 986, 1033, 1243, 1267, 1320, 1385, 1479
Hpy188I TCNGA 4 cut(s) 97, 518, 679, 1154
Hpy188III TCNNGA 3 cut(s) 28, 127, 575
Hpy8I GTNNAC 9 cut(s) 288, 955, 986, 1033, 1243, 1267, 1320, 1385, 1479
HpyAV CCTTC 3 cut(s) 470, 796, 1510
HpyCH4III ACNGT 5 cut(s) 247, 770, 1019, 1495, 1519
HpyCH4IV ACGT 3 cut(s) 415, 753, 1864
HpyF10VI GCNNNNNNNGC 9 cut(s) 56, 141, 361, 462, 632, 1592, 1733, 1896, 1905
HpyF3I CTNAG 4 cut(s) 21, 153, 194, 1118
HpySE526I ACGT 3 cut(s) 415, 753, 1864
HspAI GCGC 1 cut(s) 1897
Ksp22I TGATCA 1 cut(s) 208
Kzo9I GATC 5 cut(s) 24, 208, 1108, 1552, 1685
Lsp1109I GCAGC 7 cut(s) 646, 748, 770, 847, 974, 1517, 1595
LweI GCATC 4 cut(s) 178, 324, 622, 1317
MaeI CTAG 6 cut(s) 575, 597, 815, 1313, 1433, 1799
MaeII ACGT 3 cut(s) 415, 753, 1864
MaeIII GTNAC 3 cut(s) 1495, 1852, 1865
MalI GATC 5 cut(s) 26, 210, 1110, 1554, 1687
MbiI CCGCTC 1 cut(s) 378
MboI GATC 5 cut(s) 24, 208, 1108, 1552, 1685
MboII GAAGA 7 cut(s) 206, 506, 531, 614, 801, 1103, 1779
MfeI CAATTG 1 cut(s) 224
MflI RGATCY 1 cut(s) 1108
MhlI GDGCHC 2 cut(s) 732, 1481
MlsI TGGCCA 1 cut(s) 1064
MluCI AATT 9 cut(s) 13, 224, 302, 680, 902, 1025, 1173, 1272, 1425
MluNI TGGCCA 1 cut(s) 1064
MlyI GAGTC 2 cut(s) 223, 302
MmeI TCCRAC 4 cut(s) 65, 257, 409, 1132
Mox20I TGGCCA 1 cut(s) 1064
Mph1103I ATGCAT 2 cut(s) 1729, 1887
MscI TGGCCA 1 cut(s) 1064
MseI TTAA 8 cut(s) 137, 339, 567, 740, 866, 1133, 1349, 1698
MslI CAYNNNNRTG 2 cut(s) 414, 1625
Msp20I TGGCCA 1 cut(s) 1064
MspA1I CMGCKG 3 cut(s) 20, 352, 761
MspCI CTTAAG 2 cut(s) 136, 1348
MspR9I CCNGG 1 cut(s) 1524
MunI CAATTG 1 cut(s) 224
Mva1269I GAATGC 2 cut(s) 503, 1264
MvaI CCWGG 1 cut(s) 1524
MwoI GCNNNNNNNGC 9 cut(s) 56, 141, 361, 462, 632, 1592, 1733, 1896, 1905
NcoI CCATGG 1 cut(s) 1112
NdeI CATATG 2 cut(s) 855, 1765
NdeII GATC 5 cut(s) 24, 208, 1108, 1552, 1685
NheI GCTAGC 1 cut(s) 814
NlaIV GGNNCC 1 cut(s) 730
NmeAIII GCCGAG 2 cut(s) 343, 688
NmuCI GTSAC 1 cut(s) 1495
NsiI ATGCAT 2 cut(s) 1729, 1887
NspV TTCGAA 2 cut(s) 1102, 1288
OliI CACNNNNGTG 1 cut(s) 414
PaeR7I CTCGAG 1 cut(s) 470
PctI GAATGC 2 cut(s) 503, 1264
PfeI GAWTC 5 cut(s) 4, 103, 712, 1145, 1512
PflFI GACNNNGTC 2 cut(s) 292, 1627
PleI GAGTC 2 cut(s) 223, 301
PpsI GAGTC 2 cut(s) 223, 301
Psp6I CCWGG 1 cut(s) 1522
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 1 cut(s) 1522
PspN4I GGNNCC 1 cut(s) 730
PspOMI GGGCCC 1 cut(s) 728
PspPI GGNCC 5 cut(s) 38, 728, 729, 1033, 1547
PspXI VCTCGAGB 1 cut(s) 470
PsuI RGATCY 1 cut(s) 1108
PsyI GACNNNGTC 2 cut(s) 292, 1627
PvuII CAGCTG 2 cut(s) 20, 761
RsaI GTAC 3 cut(s) 620, 987, 1762
RsaNI GTAC 3 cut(s) 619, 986, 1761
RseI CAYNNNNRTG 2 cut(s) 414, 1625
SaqAI TTAA 8 cut(s) 137, 339, 567, 740, 866, 1133, 1349, 1698
Sau3AI GATC 5 cut(s) 24, 208, 1108, 1552, 1685
Sau96I GGNCC 5 cut(s) 38, 728, 729, 1033, 1547
SchI GAGTC 2 cut(s) 223, 302
ScrFI CCNGG 1 cut(s) 1524
SduI GDGCHC 2 cut(s) 732, 1481
SfaNI GCATC 4 cut(s) 178, 324, 622, 1317
SfcI CTRYAG 1 cut(s) 797
Sfr274I CTCGAG 1 cut(s) 470
SfuI TTCGAA 2 cut(s) 1102, 1288
SinI GGWCC 2 cut(s) 38, 1033
SlaI CTCGAG 1 cut(s) 470
SmiMI CAYNNNNRTG 2 cut(s) 414, 1625
SmlI CTYRAG 3 cut(s) 136, 470, 1348
SmoI CTYRAG 3 cut(s) 136, 470, 1348
Sse9I AATT 9 cut(s) 13, 224, 302, 680, 902, 1025, 1173, 1272, 1425
SsiI CCGC 9 cut(s) 141, 167, 352, 378, 401, 446, 1262, 1906, 1918
SspI AATATT 2 cut(s) 184, 1931
SspMI CTAG 6 cut(s) 575, 597, 815, 1313, 1433, 1799
StyD4I CCNGG 1 cut(s) 1522
StyI CCWWGG 3 cut(s) 724, 1112, 1870
TaaI ACNGT 5 cut(s) 247, 770, 1019, 1495, 1519
TaiI ACGT 3 cut(s) 418, 756, 1867
TaqI TCGA 8 cut(s) 27, 471, 699, 990, 1005, 1102, 1288, 1330
TaqII GACCGA 1 cut(s) 305
TasI AATT 9 cut(s) 13, 224, 302, 680, 902, 1025, 1173, 1272, 1425
TatI WGTACW 2 cut(s) 618, 985
TauI GCSGC 5 cut(s) 144, 170, 355, 404, 449
TfiI GAWTC 5 cut(s) 4, 103, 712, 1145, 1512
Tru1I TTAA 8 cut(s) 137, 339, 567, 740, 866, 1133, 1349, 1698
Tru9I TTAA 8 cut(s) 137, 339, 567, 740, 866, 1133, 1349, 1698
TscAI CASTG 5 cut(s) 90, 283, 564, 1219, 1522
TseFI GTSAC 1 cut(s) 1495
TseI GCWGC 7 cut(s) 659, 758, 761, 860, 962, 1505, 1583
Tsp45I GTSAC 1 cut(s) 1495
TspGWI ACGGA 4 cut(s) 80, 426, 842, 852
TspRI CASTG 5 cut(s) 90, 283, 564, 1219, 1522
Tth111I GACNNNGTC 2 cut(s) 292, 1627
Vha464I CTTAAG 2 cut(s) 136, 1348
VneI GTGCAC 1 cut(s) 1477
VpaK11BI GGWCC 2 cut(s) 38, 1033
XapI RAATTY 1 cut(s) 902
XbaI TCTAGA 1 cut(s) 574
XcmI CCANNNNNNNNNTGG 1 cut(s) 731
XhoI CTCGAG 1 cut(s) 470
XmiI GTMKAC 1 cut(s) 1266
XspI CTAG 6 cut(s) 575, 597, 815, 1313, 1433, 1799
Zsp2I ATGCAT 2 cut(s) 1729, 1887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.