MD07G1083500.v1.1

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
8411835 .. 8414818
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1083500.v1.1.491

Sequence Viewer

Length: 2058 bp
ATGTCTAGGCACGTAATGATGAAATATCAAAAAATGGATCACTCCCATTCAACTGACCAGGCCGAGAGTGCTAGTACTACTGATCGCTTAGCAGTTCAGACCAAGGAGGGAGCTACTAAAGAAGGCAATAGTGCAGTTTCGATAGGTGGCATGGAACTTGATGTGTTTCGTGCTGCAAAACAAGGCGACCTTGTTGCCCTCAGGGAACATGCTGAACATCTTCACCTAAAGCTGACTGCAACAAATAACACGGTCCTTCATGTTTATATAGCATGCTTAAGCAGGCCGACATCCGGACAAAACACACTGGAGCCAGCCGACATTGTGAACCATATCCTTGAAATGTGTCCCGCACTACTATGGCTGCACAATAAGAGCGGTGAGACTGCCTTACACCTATCGGCGAGACAGGGGCTAGTTGATATAGTTGGAGTTCTTATCGATCAGGCAACAAAAGTTCGTCACCATGGCGACCTTGAGCAAGGCCGAGTCTTAACAGAAGAAGAAGCCTGCTTGAAGAAGCAGATGCTCATTAGGAAAACCAACAACAACAAGGATACAGCGTTGCACGAAGCAGTGCGCTATAATAATCCTTTAGGAAAAACAACAACAAGAAGGAAAACCAATCAACGTTCTGTGGTGGAGAAATTGACCAAAGAAGACCCCGAGTTTTCCTACGCTGCTAATGATTCAGGCGAAACTCCAATTTATTTAGCTGCCGAGAGGAAAAATCTTCCTTTGGTTTCTGAAATGCTCAAGAATTGCAGTGTTCCAACTTACACTGGTCCAAATGGTAGAACGGCGTTGCACGTTGCAGTGATTCGCATGGATGAAGAAATGACGGAGGAACTACTAAAAGCCGATAGGACTTTGAGCAAAGCAGCAGACGAACTAGGATGTACTCCACTACACCTTGCTGCACGTTGTGGTTCCATTTCAATTGTTAAACAACTGCTTGCAAATGATAGATCTACTGCTTACATTGCTGACAAAGATGGTGCGACAGCTCTTCACTTTGCAGCGTCCGAAGGCAATCTAGATGTAATGAAAGAGCTTATTTCTCAATGCCCTGATTGTTGCGAACTGGTCGACAACAAATTTCAGAATGTTCTTTACTACGCAATACGGAACCAACAATACCAAATAGTCAATTATGTTTCAGCAGATGCATGGCTTAGCAACATCCTGTTAAATGGCATTGATGTTGATGGGAACACACCCTTCCATCACCTAGCTATTCATTCTCCCAAAAGCATCGACTTGCTAGATTATCATAAAGTTGATTGGATGGCATTCAACAAGCAAAACTTAAACGCTTTTGACATACTTCTAGCCAACTTCGATGATATACACACATTACTGCAGGAATTTTATGGAAAACTACTTCGAATGATGGGTGTTAGACCAAGTCCAAGAATTGAAAACCCAAAAGAAAGTAGTGGCAATGAGGTGGAGGAAACTCAAAGAAGCAAGGACATGGGAGAAGGTTTACAGAAAGCAAAAGAAACTCATCTGGTAGTGGCTACATTGATAGCAACTGTTACCTTCGCAGCAGGTGTTACCATGCCCGGCGGATACCAAAGCGAAAAAGGACCAGACCAGGGTTCCCCCCTTCTGTCAAGAAAAGCAGCGTTCAAAGCATTTGTTCTAACTGATACACTAGCCATGGCCATGTCTAGTTGTTCTGTCCTAGTGCTCCTTTACTCCTCAATTCACACAACGAGGAATTACAAAGGGACGTTTCAATTGGCAGTGTCTTTGACAATTTGGGCTTTGGTTGCAATGGTTGTTGCATTCATTACCGGCACATATGCAGTACTGGGTGGTCATTCTCCAGGGATTGCCGTTGCAGCTTGTGCGCTTAGCTGCATTTTCTTCTCTGTCTTTGCAAATTCTCTTCTTTCTATTGAAAGAAAAATACATAATGCGCCACATTTCATGGACGACATGGTTCACGACTTTAAGCTGCTGACAGGTTACTCGTCAATTGTCAGATTGAGCTCATTATTAGGTTTCTTCATGAAGAAGAAGGAGAATTTGTTATCACGCATTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

686

Amino Acids

75.6

Weight (kDa)

6.62

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 209 - 287 1.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 238 - 321 1.5e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 296 - 354 1e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 303 - 386 7.7e-14 Ankyrin repeats (3 copies)
PGG PF13962 495 - 606 2.6e-32 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1544
Acc36I ACCTGC 1 cut(s) 1544
AccBSI CCGCTC 1 cut(s) 378
AccI GTMKAC 1 cut(s) 1089
AccIII TCCGGA 1 cut(s) 293
AciI CCGC 3 cut(s) 351, 378, 1572
AclI AACGTT 1 cut(s) 631
AclWI GGATC 1 cut(s) 45
AcoI YGGCCR 1 cut(s) 1668
AcsI RAATTY 4 cut(s) 1097, 1367, 1891, 2035
AdeI CACNNNGTG 1 cut(s) 926
AfaI GTAC 3 cut(s) 76, 901, 1818
AfiI CCNNNNNNNGG 2 cut(s) 293, 1601
AflII CTTAAG 1 cut(s) 277
AgsI TTSAA 9 cut(s) 51, 341, 517, 939, 1297, 1421, 1636, 1745, 1910
AjnI CCWGG 3 cut(s) 57, 1599, 1834
Alw21I GWGCWC 2 cut(s) 1698, 2003
Alw26I GTCTC 2 cut(s) 377, 400
AlwI GGATC 1 cut(s) 45
Ama87I CYCGRG 1 cut(s) 665
Aor13HI TCCGGA 1 cut(s) 293
AoxI GGCC 4 cut(s) 60, 284, 484, 1668
ApoI RAATTY 4 cut(s) 1097, 1367, 1891, 2035
Asp700I GAANNNNTTC 1 cut(s) 219
AspLEI GCGC 3 cut(s) 582, 1861, 1930
AspS9I GGNCC 3 cut(s) 253, 785, 1592
AsuC2I CCSGG 1 cut(s) 1569
AsuHPI GGTGA 4 cut(s) 215, 392, 455, 1220
AsuII TTCGAA 1 cut(s) 1387
AvaI CYCGRG 1 cut(s) 665
AvaII GGWCC 3 cut(s) 253, 785, 1592
AxyI CCTNAGG 1 cut(s) 200
BalI TGGCCA 1 cut(s) 1670
BanII GRGCYC 1 cut(s) 2003
BbsI GAAGAC 1 cut(s) 666
Bbv12I GWGCWC 2 cut(s) 1698, 2003
BccI CCATC 5 cut(s) 989, 1202, 1233, 1282, 1387
BceAI ACGGC 2 cut(s) 816, 1829
BcgI CGANNNNNNTGC 2 cut(s) 176, 210
BciT130I CCWGG 3 cut(s) 59, 1601, 1836
BciVI GTATCC 2 cut(s) 550, 1568
BcnI CCSGG 1 cut(s) 1569
BcoDI GTCTC 2 cut(s) 377, 400
BfmI CTRYAG 1 cut(s) 1361
BfrI CTTAAG 1 cut(s) 277
BfuAI ACCTGC 1 cut(s) 1544
BfuI GTATCC 2 cut(s) 550, 1568
BglII AGATCT 1 cut(s) 968
BlpI GCTNAGC 3 cut(s) 88, 1175, 1862
BmcAI AGTACT 2 cut(s) 76, 1818
Bme1390I CCNGG 4 cut(s) 59, 1569, 1601, 1836
Bme18I GGWCC 3 cut(s) 253, 785, 1592
BmeT110I CYCGRG 1 cut(s) 665
BmgT120I GGNCC 3 cut(s) 253, 785, 1592
BmiI GGNNCC 4 cut(s) 312, 931, 1130, 1606
BmrFI CCNGG 4 cut(s) 59, 1569, 1601, 1836
BmrI ACTGGG 1 cut(s) 1829
BmsI GCATC 3 cut(s) 516, 1156, 1263
BmuI ACTGGG 1 cut(s) 1829
BpiI GAAGAC 1 cut(s) 666
BpmI CTGGAG 2 cut(s) 329, 1818
Bpu1102I GCTNAGC 3 cut(s) 88, 1175, 1862
Bpu14I TTCGAA 1 cut(s) 1387
BpuEI CTTGAG 2 cut(s) 497, 740
BpuMI CCSGG 1 cut(s) 1569
Bsa29I ATCGAT 1 cut(s) 441
BsaAI YACGTR 1 cut(s) 13
BsaJI CCNNGG 5 cut(s) 102, 466, 1600, 1665, 1835
BsaWI WCCGGW 1 cut(s) 293
BsaXI ACNNNNNCTCC 2 cut(s) 2024, 2054
Bsc4I CCNNNNNNNGG 2 cut(s) 293, 1601
Bse118I RCCGGY 1 cut(s) 1802
Bse1I ACTGG 4 cut(s) 312, 787, 1089, 1824
Bse21I CCTNAGG 1 cut(s) 200
Bse3DI GCAATG 3 cut(s) 981, 1450, 1788
BseAI TCCGGA 1 cut(s) 293
BseBI CCWGG 3 cut(s) 59, 1601, 1836
BseCI ATCGAT 1 cut(s) 441
BseDI CCNNGG 5 cut(s) 102, 466, 1600, 1665, 1835
BseGI GGATG 5 cut(s) 290, 835, 902, 1182, 1293
BseLI CCNNNNNNNGG 2 cut(s) 293, 1601
BseMI GCAATG 3 cut(s) 981, 1450, 1788
BseMII CTCAG 1 cut(s) 214
BseNI ACTGG 4 cut(s) 312, 787, 1089, 1824
BseRI GAGGAG 1 cut(s) 1696
BsgI GTGCAG 3 cut(s) 153, 350, 903
BshFI GGCC 4 cut(s) 62, 286, 486, 1670
BshVI ATCGAT 1 cut(s) 441
BsiHKAI GWGCWC 2 cut(s) 1698, 2003
BsiHKCI CYCGRG 1 cut(s) 665
BsiSI CCGG 3 cut(s) 294, 1569, 1803
BslFI GGGAC 2 cut(s) 333, 1750
BslI CCNNNNNNNGG 2 cut(s) 293, 1601
BsmAI GTCTC 2 cut(s) 377, 400
BsmFI GGGAC 2 cut(s) 333, 1750
BsmI GAATGC 3 cut(s) 1292, 1793, 2049
BsnI GGCC 4 cut(s) 62, 286, 486, 1670
BsoBI CYCGRG 1 cut(s) 665
Bsp119I TTCGAA 1 cut(s) 1387
Bsp1286I GDGCHC 2 cut(s) 1698, 2003
Bsp13I TCCGGA 1 cut(s) 293
Bsp143I GATC 4 cut(s) 37, 82, 442, 968
Bsp1720I GCTNAGC 3 cut(s) 88, 1175, 1862
Bsp19I CCATGG 2 cut(s) 466, 1665
BspACI CCGC 3 cut(s) 351, 378, 1572
BspANI GGCC 4 cut(s) 62, 286, 486, 1670
BspCNI CTCAG 1 cut(s) 213
BspDI ATCGAT 1 cut(s) 441
BspEI TCCGGA 1 cut(s) 293
BspHI TCATGA 1 cut(s) 2019
BspLI GGNNCC 4 cut(s) 312, 931, 1130, 1606
BspMAI CTGCAG 1 cut(s) 1365
BspMI ACCTGC 1 cut(s) 1544
BspPI GGATC 1 cut(s) 45
BspQI GCTCTTC 1 cut(s) 1014
BspT104I TTCGAA 1 cut(s) 1387
BspTI CTTAAG 1 cut(s) 277
BsrBI CCGCTC 1 cut(s) 378
BsrDI GCAATG 3 cut(s) 981, 1450, 1788
BsrFI RCCGGY 1 cut(s) 1802
BsrI ACTGG 4 cut(s) 312, 787, 1089, 1824
BssAI RCCGGY 1 cut(s) 1802
BssECI CCNNGG 5 cut(s) 102, 466, 1600, 1665, 1835
BssMI GATC 4 cut(s) 37, 82, 442, 968
BssT1I CCWWGG 3 cut(s) 102, 466, 1665
Bst2UI CCWGG 3 cut(s) 59, 1601, 1836
Bst4CI ACNGT 2 cut(s) 253, 1540
Bst6I CTCTTC 2 cut(s) 1014, 1902
BstAFI CTTAAG 1 cut(s) 277
BstAPI GCANNNNNTGC 1 cut(s) 1856
BstBAI YACGTR 1 cut(s) 13
BstBI TTCGAA 1 cut(s) 1387
BstC8I GCNNGC 5 cut(s) 274, 284, 315, 511, 957
BstDEI CTNAG 4 cut(s) 88, 200, 1175, 1862
BstDSI CCRYGG 2 cut(s) 466, 1665
BstF5I GGATG 5 cut(s) 290, 835, 902, 1182, 1293
BstHHI GCGC 3 cut(s) 582, 1861, 1930
BstKTI GATC 4 cut(s) 40, 85, 445, 971
BstMAI GTCTC 2 cut(s) 377, 400
BstMBI GATC 4 cut(s) 37, 82, 442, 968
BstMWI GCNNNNNNNGC 6 cut(s) 68, 983, 1637, 1778, 1850, 1856
BstNI CCWGG 3 cut(s) 59, 1601, 1836
BstNSI RCATGY 2 cut(s) 212, 276
BstSCI CCNGG 4 cut(s) 57, 1567, 1599, 1834
BstSFI CTRYAG 1 cut(s) 1361
BstV2I GAAGAC 1 cut(s) 666
BstX2I RGATCY 1 cut(s) 968
BstYI RGATCY 1 cut(s) 968
Bsu15I ATCGAT 1 cut(s) 441
Bsu36I CCTNAGG 1 cut(s) 200
BsuI GTATCC 2 cut(s) 550, 1568
BsuRI GGCC 4 cut(s) 62, 286, 486, 1670
BsuTUI ATCGAT 1 cut(s) 441
BtgI CCRYGG 2 cut(s) 466, 1665
BtsCI GGATG 5 cut(s) 290, 835, 902, 1182, 1293
BtsI GCAGTG 4 cut(s) 582, 772, 822, 1758
BtsIMutI CAGTG 6 cut(s) 305, 582, 772, 780, 822, 1758
BveI ACCTGC 1 cut(s) 1544
Cac8I GCNNGC 5 cut(s) 274, 284, 315, 511, 957
CciI TCATGA 1 cut(s) 2019
CfoI GCGC 3 cut(s) 582, 1861, 1930
Cfr10I RCCGGY 1 cut(s) 1802
Cfr13I GGNCC 3 cut(s) 253, 785, 1592
ClaI ATCGAT 1 cut(s) 441
CseI GACGC 1 cut(s) 1011
Csp6I GTAC 3 cut(s) 75, 900, 1817
CviQI GTAC 3 cut(s) 75, 900, 1817
DdeI CTNAG 4 cut(s) 88, 200, 1175, 1862
DpnI GATC 4 cut(s) 39, 84, 444, 970
DpnII GATC 4 cut(s) 37, 82, 442, 968
DraIII CACNNNGTG 1 cut(s) 926
EaeI YGGCCR 1 cut(s) 1668
Eam1104I CTCTTC 2 cut(s) 1014, 1902
EarI CTCTTC 2 cut(s) 1014, 1902
EciI GGCGGA 1 cut(s) 1587
Ecl136II GAGCTC 1 cut(s) 2001
Eco130I CCWWGG 3 cut(s) 102, 466, 1665
Eco24I GRGCYC 1 cut(s) 2003
Eco47I GGWCC 3 cut(s) 253, 785, 1592
Eco53kI GAGCTC 1 cut(s) 2001
Eco81I CCTNAGG 1 cut(s) 200
Eco88I CYCGRG 1 cut(s) 665
EcoICRI GAGCTC 1 cut(s) 2001
EcoRII CCWGG 3 cut(s) 57, 1599, 1834
EcoT14I CCWWGG 3 cut(s) 102, 466, 1665
EcoT22I ATGCAT 1 cut(s) 1171
EcoT38I GRGCYC 1 cut(s) 2003
ErhI CCWWGG 3 cut(s) 102, 466, 1665
FalI AAGNNNNNCTT 4 cut(s) 174, 206, 1292, 1324
FaqI GGGAC 2 cut(s) 333, 1750
FauI CCCGC 1 cut(s) 358
FauNDI CATATG 1 cut(s) 1810
FblI GTMKAC 1 cut(s) 1089
FokI GGATG 5 cut(s) 277, 842, 909, 1169, 1300
FriOI GRGCYC 1 cut(s) 2003
GlaI GCGC 3 cut(s) 581, 1860, 1929
GsuI CTGGAG 2 cut(s) 329, 1818
HaeIII GGCC 4 cut(s) 62, 286, 486, 1670
HapII CCGG 3 cut(s) 294, 1569, 1803
HgaI GACGC 1 cut(s) 1011
HhaI GCGC 3 cut(s) 582, 1861, 1930
Hin6I GCGC 3 cut(s) 580, 1859, 1928
HinP1I GCGC 3 cut(s) 580, 1859, 1928
HincII GTYRAC 1 cut(s) 1090
HindII GTYRAC 1 cut(s) 1090
HinfI GANTC 3 cut(s) 489, 689, 820
HpaII CCGG 3 cut(s) 294, 1569, 1803
HphI GGTGA 4 cut(s) 215, 392, 455, 1220
Hpy166II GTNNAC 4 cut(s) 328, 1090, 1490, 1954
Hpy188I TCNGA 5 cut(s) 99, 748, 1027, 1104, 1994
Hpy188III TCNNGA 6 cut(s) 294, 757, 1037, 1620, 1955, 2020
Hpy8I GTNNAC 4 cut(s) 328, 1090, 1490, 1954
HpyAV CCTTC 9 cut(s) 116, 266, 609, 1022, 1231, 1478, 1555, 1622, 2023
HpyCH4III ACNGT 2 cut(s) 253, 1540
HpyCH4IV ACGT 5 cut(s) 12, 631, 810, 922, 1739
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 983, 1637, 1778, 1850, 1856
HpyF3I CTNAG 4 cut(s) 88, 200, 1175, 1862
HpySE526I ACGT 5 cut(s) 12, 631, 810, 922, 1739
HspAI GCGC 3 cut(s) 580, 1859, 1928
Kpn2I TCCGGA 1 cut(s) 293
Kzo9I GATC 4 cut(s) 37, 82, 442, 968
LguI GCTCTTC 1 cut(s) 1014
LmnI GCTCC 3 cut(s) 110, 310, 1701
LweI GCATC 3 cut(s) 516, 1156, 1263
MaeII ACGT 5 cut(s) 12, 631, 810, 922, 1739
MaeIII GTNAC 4 cut(s) 461, 1540, 1558, 1976
MalI GATC 4 cut(s) 39, 84, 444, 970
MbiI CCGCTC 1 cut(s) 378
MboI GATC 4 cut(s) 37, 82, 442, 968
MfeI CAATTG 3 cut(s) 939, 1745, 1986
MflI RGATCY 1 cut(s) 968
MhlI GDGCHC 2 cut(s) 1698, 2003
MlsI TGGCCA 1 cut(s) 1670
MluNI TGGCCA 1 cut(s) 1670
MlyI GAGTC 1 cut(s) 498
MmeI TCCRAC 2 cut(s) 409, 797
MnlI CCTC 8 cut(s) 100, 209, 717, 838, 1441, 1447, 1716, 1717
Mox20I TGGCCA 1 cut(s) 1670
Mph1103I ATGCAT 1 cut(s) 1171
MroI TCCGGA 1 cut(s) 293
MroXI GAANNNNTTC 1 cut(s) 219
MscI TGGCCA 1 cut(s) 1670
MseI TTAA 7 cut(s) 278, 494, 945, 1190, 1310, 1962, 2056
MslI CAYNNNNRTG 2 cut(s) 358, 1670
Msp20I TGGCCA 1 cut(s) 1670
MspCI CTTAAG 1 cut(s) 277
MspI CCGG 3 cut(s) 294, 1569, 1803
MspR9I CCNGG 4 cut(s) 59, 1569, 1601, 1836
MunI CAATTG 3 cut(s) 939, 1745, 1986
Mva1269I GAATGC 3 cut(s) 1292, 1793, 2049
MvaI CCWGG 3 cut(s) 59, 1601, 1836
MwoI GCNNNNNNNGC 6 cut(s) 68, 983, 1637, 1778, 1850, 1856
NciI CCSGG 1 cut(s) 1569
NcoI CCATGG 2 cut(s) 466, 1665
NdeI CATATG 1 cut(s) 1810
NdeII GATC 4 cut(s) 37, 82, 442, 968
NlaIV GGNNCC 4 cut(s) 312, 931, 1130, 1606
NmeAIII GCCGAG 3 cut(s) 88, 512, 745
NmuCI GTSAC 1 cut(s) 461
NsiI ATGCAT 1 cut(s) 1171
NspI RCATGY 2 cut(s) 212, 276
NspV TTCGAA 1 cut(s) 1387
PaeI GCATGC 1 cut(s) 276
PagI TCATGA 1 cut(s) 2019
PaqCI CACCTGC 1 cut(s) 1544
PciSI GCTCTTC 1 cut(s) 1014
PctI GAATGC 3 cut(s) 1292, 1793, 2049
PdmI GAANNNNTTC 1 cut(s) 219
PfeI GAWTC 2 cut(s) 689, 820
PflFI GACNNNGTC 1 cut(s) 1407
PleI GAGTC 1 cut(s) 497
PpsI GAGTC 1 cut(s) 497
Ppu21I YACGTR 1 cut(s) 13
Psp124BI GAGCTC 1 cut(s) 2003
Psp1406I AACGTT 1 cut(s) 631
Psp6I CCWGG 3 cut(s) 57, 1599, 1834
PspGI CCWGG 3 cut(s) 57, 1599, 1834
PspN4I GGNNCC 4 cut(s) 312, 931, 1130, 1606
PspPI GGNCC 3 cut(s) 253, 785, 1592
PsrI GAACNNNNNNTAC 2 cut(s) 1121, 1153
PstI CTGCAG 1 cut(s) 1365
PsuI RGATCY 1 cut(s) 968
PsyI GACNNNGTC 1 cut(s) 1407
RsaI GTAC 3 cut(s) 76, 901, 1818
RsaNI GTAC 3 cut(s) 75, 900, 1817
RseI CAYNNNNRTG 2 cut(s) 358, 1670
SacI GAGCTC 1 cut(s) 2003
SalI GTCGAC 1 cut(s) 1088
SapI GCTCTTC 1 cut(s) 1014
SaqAI TTAA 7 cut(s) 278, 494, 945, 1190, 1310, 1962, 2056
Sau3AI GATC 4 cut(s) 37, 82, 442, 968
Sau96I GGNCC 3 cut(s) 253, 785, 1592
ScaI AGTACT 2 cut(s) 76, 1818
SchI GAGTC 1 cut(s) 498
ScrFI CCNGG 4 cut(s) 59, 1569, 1601, 1836
SduI GDGCHC 2 cut(s) 1698, 2003
SfaNI GCATC 3 cut(s) 516, 1156, 1263
SfcI CTRYAG 1 cut(s) 1361
SfuI TTCGAA 1 cut(s) 1387
SinI GGWCC 3 cut(s) 253, 785, 1592
SmiMI CAYNNNNRTG 2 cut(s) 358, 1670
SmlI CTYRAG 3 cut(s) 277, 476, 755
SmoI CTYRAG 3 cut(s) 277, 476, 755
SphI GCATGC 1 cut(s) 276
SsiI CCGC 3 cut(s) 351, 378, 1572
SstI GAGCTC 1 cut(s) 2003
StyD4I CCNGG 4 cut(s) 57, 1567, 1599, 1834
StyI CCWWGG 3 cut(s) 102, 466, 1665
TaaI ACNGT 2 cut(s) 253, 1540
TaiI ACGT 5 cut(s) 15, 634, 813, 925, 1742
TaqI TCGA 6 cut(s) 140, 441, 1089, 1257, 1341, 1387
TatI WGTACW 3 cut(s) 74, 899, 1816
TfiI GAWTC 2 cut(s) 689, 820
Tru1I TTAA 7 cut(s) 278, 494, 945, 1190, 1310, 1962, 2056
Tru9I TTAA 7 cut(s) 278, 494, 945, 1190, 1310, 1962, 2056
TscAI CASTG 6 cut(s) 312, 582, 772, 787, 822, 1758
TseFI GTSAC 1 cut(s) 461
Tsp45I GTSAC 1 cut(s) 461
TspDTI ATGAA 9 cut(s) 35, 248, 846, 1061, 1229, 1786, 1927, 2008, 2036
TspGWI ACGGA 2 cut(s) 857, 1141
TspRI CASTG 6 cut(s) 312, 582, 772, 787, 822, 1758
Tth111I GACNNNGTC 1 cut(s) 1407
Vha464I CTTAAG 1 cut(s) 277
VpaK11BI GGWCC 3 cut(s) 253, 785, 1592
XapI RAATTY 4 cut(s) 1097, 1367, 1891, 2035
XbaI TCTAGA 1 cut(s) 1036
XceI RCATGY 2 cut(s) 212, 276
XmiI GTMKAC 1 cut(s) 1089
XmnI GAANNNNTTC 1 cut(s) 219
ZrmI AGTACT 2 cut(s) 76, 1818
Zsp2I ATGCAT 1 cut(s) 1171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.