pycom15g20650

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0000489
Physical Location & Seq
Reverse (-)
14803919 .. 14806697
2779 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g20650.2

Sequence Viewer

Length: 1995 bp
ATGGATCCCTCCCATTCAACTGATGAGACCGAGAGTGCTAGTAGTACTGATCACTTAGCAACAGTTCTGATAGGTGGCATGGAACTTGATGTATTTCATGCTGCAAAACAAGGCAACCTTGAGGCCCTCCGGGATCATGCAGAACATCTTGACCTAAAACTGACTGCAACAAATAACACTGTCCTTCATATTTATATAGCGTGCAGCCCAACATCTGCACAAGAAGAAGTGGAGTCAACCGGGATTGTGGAGGATATCCTTCAAATGTGTCCCGCACTACTATTGCTACACAATAAGAGTGGTGAGACTGCCTTACACATTGCGGCGAGACGCGGGCTAGCAGGTATAGTTGGAGTTCTTATCGACCAGGCTGCAAAAGTTCGTCACCCTGGCGACCTTGAGCAAGGTCGAGTCTTAACAGAAGAAGAAGCCTGCTTGCAGAAGCAGATGCTCATTAGGAAAACCAACAACAACAAGAATACAGCGTTGCACGAAGCAGTGCGTTTTTGTCAACCTTCGGTGGTGGAGATATTGACCAAAGAAGACCCCGAGTTTTCCTACGCTGCTAATGATCTAGGCGAAACTCCCCTTTATTTAGCTGTTGAGAGGGGATATCTTCCTTTGGTTTCTAAAATGCTCAGCAATTGCAATGTTCCAACGTACATTGGCCCAAACGGTAGAACGGCGTTGCACGCTGCAGTGATTCGCAAGGATGAAGGAATGATGGAGGAACTAATAAGAGCCGATAGGACTTTGAGCAAAGCAGCAGACGAACTAGGATGTACTCCGCTACACCTTGCTGCACGTTTTGGTCCCCTTTCAATTGTTAAGCAACTGCTTGCAAATGATAGATCTATTGCTTACATTGCTGACAAGGATGGCGCTACAGCTCTTCACTTTGCGGCTTCCGAAGGCAATCTAGATGTAATGAGAGTGCTTATTTCTTATTGCCCTGATTGTTGCGAACTGGTCGACAACAAATTTCAGAATGCACTTCACTATGCCACAAGGAACGGTGGATACCAAATAGTAGGATACGTTTTAGCAGATGCATGGCTTAGCAACATCCTGTTAAATGCCATGGATATTGACGGGAACACACCCCTTGCTCATTCTCCCTACAGCATGCTGTTTACTGAGTGTGTTTATGATGCTAAAGTTGATATAATGGCTTTCAACAAGAAAAATTTAAACGTTTTAGACATCATTCTAGCTAACGAGGACAAGATATCATTGCTGCAGAAAGATTTGAAAAAACCAATGCAACGGAGGGGTATTAAACCAAGTCTTAGAATTAAAAACCCAAAAGGCAATAACGACAATAAGGTGGAGGAAAATCAAATGAGCAAGGACATTGGAAAAGGTTTACAGAAAGCAAAGGAAACTCATCTGGTAGTGGCTACATTGATAGCAACTGTAACCTTCGCAGCAGGTTTTACCATGCCCGGTGGATACCAAAGTGAAAAAGGACCGAACCAGGGTTCCGTCTTTCTGTCAAGAAACGCAGCGTTCAAAGCATTTGTTATAACTGATACAATAGCCATGGCCATGTCTAGTTGTTCTGTCCTAGTGCTCCTTTATTCCTCAATTCACACAAAGGAAAATTTCAAGAACCAGATATTTGGGACGTTTCACTTGGCAGTGTCTTTGACAATGTGGGCTTTGGTTGCAATGGTTGTTTCATTCATTACCGGCATATATGCGGTCTTGGGTGGTCATTCTCCAGGACTTGCCGTTGCAGCTTGTGTGCTTGGCTGCATTTTCTTCTTTGTCTTTGCAAATTCTCTTCTTTCCGCTGAAAGAATATTACTAAAGGCGCCACATTTCCTGGACGACATGGTTCGCGACTTTTGGGTGCTGATACTTTGCTCGTTATTTGCTATTAGCGTTAAAGTGTCGGAGATGGTCGCTTCATCACCAATAGCATCAATTCTGTCTCCAGTTGTGCAATTAATAAGCGTGGGGCTTTTCTGCAAAAGACCTCAATGCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

665

Amino Acids

72.38

Weight (kDa)

6.07

Isoelectric Point (pI)

37.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1526
Acc36I ACCTGC 2 cut(s) 332, 1421
AccB1I GGYRCC 1 cut(s) 1816
AccI GTMKAC 1 cut(s) 972
AccII CGCG 2 cut(s) 333, 1845
AciI CCGC 7 cut(s) 273, 323, 333, 788, 902, 1703, 1794
AclI AACGTT 1 cut(s) 1194
AclWI GGATC 2 cut(s) 12, 141
AcoI YGGCCR 1 cut(s) 1545
AcsI RAATTY 4 cut(s) 980, 1186, 1603, 1780
AcyI GRCGYC 1 cut(s) 1817
AfaI GTAC 3 cut(s) 46, 662, 784
AfiI CCNNNNNNNGG 1 cut(s) 1478
AgsI TTSAA 7 cut(s) 18, 263, 822, 1177, 1252, 1513, 1609
AjnI CCWGG 5 cut(s) 366, 388, 1476, 1723, 1827
AloI GAACNNNNNNTCC 2 cut(s) 1466, 1498
AluBI AGCT 4 cut(s) 599, 890, 1214, 1742
AluI AGCT 4 cut(s) 599, 890, 1214, 1742
Alw21I GWGCWC 1 cut(s) 1575
Alw26I GTCTC 4 cut(s) 20, 299, 322, 1941
AlwI GGATC 2 cut(s) 12, 141
Ama87I CYCGRG 1 cut(s) 548
AoxI GGCC 3 cut(s) 123, 667, 1545
ApoI RAATTY 4 cut(s) 980, 1186, 1603, 1780
AseI ATTAAT 1 cut(s) 1952
AspLEI GCGC 2 cut(s) 884, 1819
AspS9I GGNCC 4 cut(s) 124, 668, 812, 1469
AsuC2I CCSGG 3 cut(s) 131, 241, 1446
AsuHPI GGTGA 3 cut(s) 314, 377, 1908
AsuNHI GCTAGC 1 cut(s) 337
AvaI CYCGRG 1 cut(s) 548
AvaII GGWCC 2 cut(s) 812, 1469
BaeI ACNNNNGTAYC 2 cut(s) 1444, 1477
BalI TGGCCA 1 cut(s) 1547
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1816
BbsI GAAGAC 1 cut(s) 549
Bbv12I GWGCWC 1 cut(s) 1575
BccI CCATC 3 cut(s) 718, 872, 1897
BceAI ACGGC 2 cut(s) 699, 1718
BcgI CGANNNNNNTGC 2 cut(s) 353, 387
BciT130I CCWGG 5 cut(s) 368, 390, 1478, 1725, 1829
BciVI GTATCC 3 cut(s) 1013, 1028, 1445
BclI TGATCA 1 cut(s) 49
BcnI CCSGG 3 cut(s) 131, 241, 1446
BcoDI GTCTC 4 cut(s) 20, 299, 322, 1941
BfaI CTAG 8 cut(s) 39, 338, 575, 776, 920, 1211, 1554, 1568
BfmI CTRYAG 4 cut(s) 696, 885, 1120, 1238
BfoI RGCGCY 2 cut(s) 885, 1820
BfuAI ACCTGC 2 cut(s) 332, 1421
BfuI GTATCC 3 cut(s) 1013, 1028, 1445
BglII AGATCT 1 cut(s) 851
BlpI GCTNAGC 2 cut(s) 638, 1058
BmcAI AGTACT 1 cut(s) 46
Bme1390I CCNGG 8 cut(s) 131, 241, 368, 390, 1446, 1478, 1725, 1829
Bme18I GGWCC 2 cut(s) 812, 1469
BmeT110I CYCGRG 1 cut(s) 548
BmgT120I GGNCC 4 cut(s) 124, 668, 812, 1469
BmiI GGNNCC 4 cut(s) 6, 814, 1483, 1818
BmrFI CCNGG 8 cut(s) 131, 241, 368, 390, 1446, 1478, 1725, 1829
BmsI GCATC 4 cut(s) 438, 1039, 1141, 1934
BmtI GCTAGC 1 cut(s) 341
BpiI GAAGAC 1 cut(s) 549
BpmI CTGGAG 2 cut(s) 1707, 1923
Bpu1102I GCTNAGC 2 cut(s) 638, 1058
BpuEI CTTGAG 2 cut(s) 140, 419
BpuMI CCSGG 3 cut(s) 131, 241, 1446
BsaHI GRCGYC 1 cut(s) 1817
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 4 cut(s) 388, 1080, 1477, 1542
Bsc4I CCNNNNNNNGG 1 cut(s) 1478
Bse118I RCCGGY 1 cut(s) 1691
Bse1I ACTGG 2 cut(s) 972, 1940
Bse3DI GCAATG 5 cut(s) 318, 655, 864, 1232, 1677
BseBI CCWGG 5 cut(s) 368, 390, 1478, 1725, 1829
BseDI CCNNGG 4 cut(s) 388, 1080, 1477, 1542
BseGI GGATG 4 cut(s) 718, 785, 883, 1065
BseLI CCNNNNNNNGG 1 cut(s) 1478
BseMI GCAATG 5 cut(s) 318, 655, 864, 1232, 1677
BseMII CTCAG 2 cut(s) 652, 1128
BseNI ACTGG 2 cut(s) 972, 1940
BsgI GTGCAG 3 cut(s) 201, 223, 786
Bsh1236I CGCG 2 cut(s) 333, 1845
BshFI GGCC 3 cut(s) 125, 669, 1547
BshNI GGYRCC 1 cut(s) 1816
BsiHKAI GWGCWC 1 cut(s) 1575
BsiHKCI CYCGRG 1 cut(s) 548
BsiSI CCGG 4 cut(s) 130, 240, 1446, 1692
BslFI GGGAC 3 cut(s) 255, 798, 1639
BslI CCNNNNNNNGG 1 cut(s) 1478
BsmAI GTCTC 4 cut(s) 20, 299, 322, 1941
BsmBI CGTCTC 1 cut(s) 322
BsmFI GGGAC 3 cut(s) 255, 798, 1639
BsmI GAATGC 1 cut(s) 994
BsnI GGCC 3 cut(s) 125, 669, 1547
Bso31I GGTCTC 1 cut(s) 20
BsoBI CYCGRG 1 cut(s) 548
Bsp1286I GDGCHC 1 cut(s) 1575
Bsp143I GATC 5 cut(s) 4, 49, 133, 571, 851
Bsp1720I GCTNAGC 2 cut(s) 638, 1058
Bsp19I CCATGG 2 cut(s) 1080, 1542
Bsp68I TCGCGA 1 cut(s) 1845
BspACI CCGC 7 cut(s) 273, 323, 333, 788, 902, 1703, 1794
BspANI GGCC 3 cut(s) 125, 669, 1547
BspCNI CTCAG 2 cut(s) 651, 1129
BspFNI CGCG 2 cut(s) 333, 1845
BspLI GGNNCC 4 cut(s) 6, 814, 1483, 1818
BspMAI CTGCAG 2 cut(s) 700, 1242
BspMI ACCTGC 2 cut(s) 332, 1421
BspOI GCTAGC 1 cut(s) 341
BspPI GGATC 2 cut(s) 12, 141
BspQI GCTCTTC 1 cut(s) 897
BspT107I GGYRCC 1 cut(s) 1816
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 5 cut(s) 318, 655, 864, 1232, 1677
BsrFI RCCGGY 1 cut(s) 1691
BsrI ACTGG 2 cut(s) 972, 1940
BssAI RCCGGY 1 cut(s) 1691
BssECI CCNNGG 4 cut(s) 388, 1080, 1477, 1542
BssMI GATC 5 cut(s) 4, 49, 133, 571, 851
BssNI GRCGYC 1 cut(s) 1817
BssT1I CCWWGG 2 cut(s) 1080, 1542
Bst2UI CCWGG 5 cut(s) 368, 390, 1478, 1725, 1829
Bst4CI ACNGT 5 cut(s) 64, 181, 677, 1016, 1417
Bst6I CTCTTC 2 cut(s) 897, 1791
BstACI GRCGYC 1 cut(s) 1817
BstC8I GCNNGC 8 cut(s) 202, 335, 339, 433, 437, 693, 840, 1127
BstDEI CTNAG 5 cut(s) 55, 638, 1058, 1137, 1289
BstDSI CCRYGG 2 cut(s) 1080, 1542
BstF5I GGATG 4 cut(s) 718, 785, 883, 1065
BstFNI CGCG 2 cut(s) 333, 1845
BstH2I RGCGCY 2 cut(s) 885, 1820
BstHHI GCGC 2 cut(s) 884, 1819
BstKTI GATC 5 cut(s) 7, 52, 136, 574, 854
BstMAI GTCTC 4 cut(s) 20, 299, 322, 1941
BstMBI GATC 5 cut(s) 4, 49, 133, 571, 851
BstMWI GCNNNNNNNGC 5 cut(s) 692, 866, 1514, 1667, 1739
BstNI CCWGG 5 cut(s) 368, 390, 1478, 1725, 1829
BstNSI RCATGY 1 cut(s) 1129
BstSCI CCNGG 8 cut(s) 129, 239, 366, 388, 1444, 1476, 1723, 1827
BstSFI CTRYAG 4 cut(s) 696, 885, 1120, 1238
BstUI CGCG 2 cut(s) 333, 1845
BstV2I GAAGAC 1 cut(s) 549
BstX2I RGATCY 2 cut(s) 4, 851
BstXI CCANNNNNNTGG 1 cut(s) 1622
BstYI RGATCY 2 cut(s) 4, 851
BsuI GTATCC 3 cut(s) 1013, 1028, 1445
BsuRI GGCC 3 cut(s) 125, 669, 1547
BtgI CCRYGG 2 cut(s) 1080, 1542
BtsCI GGATG 4 cut(s) 718, 785, 883, 1065
BtsI GCAGTG 3 cut(s) 504, 705, 1647
BtsIMutI CAGTG 4 cut(s) 177, 504, 705, 1647
BtuMI TCGCGA 1 cut(s) 1845
BveI ACCTGC 2 cut(s) 332, 1421
Cac8I GCNNGC 8 cut(s) 202, 335, 339, 433, 437, 693, 840, 1127
CfoI GCGC 2 cut(s) 884, 1819
Cfr10I RCCGGY 1 cut(s) 1691
Cfr13I GGNCC 4 cut(s) 124, 668, 812, 1469
CseI GACGC 1 cut(s) 339
Csp6I GTAC 3 cut(s) 45, 661, 783
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviQI GTAC 3 cut(s) 45, 661, 783
DdeI CTNAG 5 cut(s) 55, 638, 1058, 1137, 1289
DinI GGCGCC 1 cut(s) 1818
DpnI GATC 5 cut(s) 6, 51, 135, 573, 853
DpnII GATC 5 cut(s) 4, 49, 133, 571, 851
DraI TTTAAA 1 cut(s) 1191
EaeI YGGCCR 1 cut(s) 1545
Eam1104I CTCTTC 2 cut(s) 897, 1791
EarI CTCTTC 2 cut(s) 897, 1791
Eco130I CCWWGG 2 cut(s) 1080, 1542
Eco31I GGTCTC 1 cut(s) 20
Eco32I GATATC 3 cut(s) 256, 614, 1230
Eco47I GGWCC 2 cut(s) 812, 1469
Eco88I CYCGRG 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 124
EcoRII CCWGG 5 cut(s) 366, 388, 1476, 1723, 1827
EcoRV GATATC 3 cut(s) 256, 614, 1230
EcoT14I CCWWGG 2 cut(s) 1080, 1542
EcoT22I ATGCAT 1 cut(s) 1054
EgeI GGCGCC 1 cut(s) 1818
EheI GGCGCC 1 cut(s) 1818
ErhI CCWWGG 2 cut(s) 1080, 1542
Esp3I CGTCTC 1 cut(s) 322
FalI AAGNNNNNCTT 2 cut(s) 102, 134
FaqI GGGAC 3 cut(s) 255, 798, 1639
FauI CCCGC 2 cut(s) 280, 326
FbaI TGATCA 1 cut(s) 49
FblI GTMKAC 1 cut(s) 972
FokI GGATG 4 cut(s) 725, 792, 890, 1052
FspBI CTAG 8 cut(s) 39, 338, 575, 776, 920, 1211, 1554, 1568
GlaI GCGC 2 cut(s) 883, 1818
GsuI CTGGAG 2 cut(s) 1707, 1923
HaeII RGCGCY 2 cut(s) 885, 1820
HaeIII GGCC 3 cut(s) 125, 669, 1547
HapII CCGG 4 cut(s) 130, 240, 1446, 1692
HgaI GACGC 1 cut(s) 339
HhaI GCGC 2 cut(s) 884, 1819
Hin1I GRCGYC 1 cut(s) 1817
Hin6I GCGC 2 cut(s) 882, 1817
HinP1I GCGC 2 cut(s) 882, 1817
HincII GTYRAC 3 cut(s) 237, 512, 973
HindII GTYRAC 3 cut(s) 237, 512, 973
HinfI GANTC 3 cut(s) 233, 411, 703
HpaII CCGG 4 cut(s) 130, 240, 1446, 1692
HphI GGTGA 3 cut(s) 314, 377, 1908
Hpy166II GTNNAC 5 cut(s) 237, 512, 973, 1134, 1367
Hpy188I TCNGA 4 cut(s) 69, 910, 987, 1900
Hpy188III TCNNGA 5 cut(s) 149, 920, 1497, 1609, 1844
Hpy8I GTNNAC 5 cut(s) 237, 512, 973, 1134, 1367
HpyAV CCTTC 6 cut(s) 194, 269, 525, 710, 905, 1432
HpyCH4III ACNGT 5 cut(s) 64, 181, 677, 1016, 1417
HpyCH4IV ACGT 5 cut(s) 659, 805, 1038, 1194, 1628
HpyF10VI GCNNNNNNNGC 5 cut(s) 692, 866, 1514, 1667, 1739
HpyF3I CTNAG 5 cut(s) 55, 638, 1058, 1137, 1289
HpySE526I ACGT 5 cut(s) 659, 805, 1038, 1194, 1628
Hsp92I GRCGYC 1 cut(s) 1817
HspAI GCGC 2 cut(s) 882, 1817
KasI GGCGCC 1 cut(s) 1816
Ksp22I TGATCA 1 cut(s) 49
Kzo9I GATC 5 cut(s) 4, 49, 133, 571, 851
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 1 cut(s) 1578
LweI GCATC 4 cut(s) 438, 1039, 1141, 1934
MaeI CTAG 8 cut(s) 39, 338, 575, 776, 920, 1211, 1554, 1568
MaeII ACGT 5 cut(s) 659, 805, 1038, 1194, 1628
MaeIII GTNAC 2 cut(s) 383, 1417
MalI GATC 5 cut(s) 6, 51, 135, 573, 853
MboI GATC 5 cut(s) 4, 49, 133, 571, 851
MboII GAAGA 8 cut(s) 236, 434, 437, 554, 608, 884, 1756, 1778
MfeI CAATTG 2 cut(s) 643, 822
MflI RGATCY 2 cut(s) 4, 851
MhlI GDGCHC 1 cut(s) 1575
MlsI TGGCCA 1 cut(s) 1547
MluNI TGGCCA 1 cut(s) 1547
Mly113I GGCGCC 1 cut(s) 1817
MlyI GAGTC 2 cut(s) 242, 420
MmeI TCCRAC 3 cut(s) 331, 680, 1878
Mox20I TGGCCA 1 cut(s) 1547
Mph1103I ATGCAT 1 cut(s) 1054
MscI TGGCCA 1 cut(s) 1547
MseI TTAA 9 cut(s) 416, 828, 1073, 1190, 1278, 1296, 1890, 1952, 1993
MslI CAYNNNNRTG 1 cut(s) 1547
Msp20I TGGCCA 1 cut(s) 1547
MspA1I CMGCKG 1 cut(s) 1796
MspI CCGG 4 cut(s) 130, 240, 1446, 1692
MspR9I CCNGG 8 cut(s) 131, 241, 368, 390, 1446, 1478, 1725, 1829
MunI CAATTG 2 cut(s) 643, 822
Mva1269I GAATGC 1 cut(s) 994
MvaI CCWGG 5 cut(s) 368, 390, 1478, 1725, 1829
MvnI CGCG 2 cut(s) 333, 1845
MwoI GCNNNNNNNGC 5 cut(s) 692, 866, 1514, 1667, 1739
NarI GGCGCC 1 cut(s) 1817
NciI CCSGG 3 cut(s) 131, 241, 1446
NcoI CCATGG 2 cut(s) 1080, 1542
NdeII GATC 5 cut(s) 4, 49, 133, 571, 851
NheI GCTAGC 1 cut(s) 337
NlaIV GGNNCC 4 cut(s) 6, 814, 1483, 1818
NmuCI GTSAC 1 cut(s) 383
NruI TCGCGA 1 cut(s) 1845
NsiI ATGCAT 1 cut(s) 1054
NspI RCATGY 1 cut(s) 1129
PaeI GCATGC 1 cut(s) 1129
PciSI GCTCTTC 1 cut(s) 897
PctI GAATGC 1 cut(s) 994
PfeI GAWTC 1 cut(s) 703
PfoI TCCNGGA 3 cut(s) 129, 1723, 1827
PleI GAGTC 2 cut(s) 241, 419
PluTI GGCGCC 1 cut(s) 1820
PpsI GAGTC 2 cut(s) 241, 419
PshBI ATTAAT 1 cut(s) 1952
PsiI TTATAA 1 cut(s) 1526
Psp1406I AACGTT 1 cut(s) 1194
Psp6I CCWGG 5 cut(s) 366, 388, 1476, 1723, 1827
PspGI CCWGG 5 cut(s) 366, 388, 1476, 1723, 1827
PspN4I GGNNCC 4 cut(s) 6, 814, 1483, 1818
PspPI GGNCC 4 cut(s) 124, 668, 812, 1469
PsrI GAACNNNNNNTAC 2 cut(s) 1004, 1036
PstI CTGCAG 2 cut(s) 700, 1242
PsuI RGATCY 2 cut(s) 4, 851
RruI TCGCGA 1 cut(s) 1845
RsaI GTAC 3 cut(s) 46, 662, 784
RsaNI GTAC 3 cut(s) 45, 661, 783
RseI CAYNNNNRTG 1 cut(s) 1547
SalI GTCGAC 1 cut(s) 971
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 9 cut(s) 416, 828, 1073, 1190, 1278, 1296, 1890, 1952, 1993
Sau3AI GATC 5 cut(s) 4, 49, 133, 571, 851
Sau96I GGNCC 4 cut(s) 124, 668, 812, 1469
ScaI AGTACT 1 cut(s) 46
SchI GAGTC 2 cut(s) 242, 420
ScrFI CCNGG 8 cut(s) 131, 241, 368, 390, 1446, 1478, 1725, 1829
SduI GDGCHC 1 cut(s) 1575
SfaNI GCATC 4 cut(s) 438, 1039, 1141, 1934
SfcI CTRYAG 4 cut(s) 696, 885, 1120, 1238
SfoI GGCGCC 1 cut(s) 1818
SinI GGWCC 2 cut(s) 812, 1469
SmiMI CAYNNNNRTG 1 cut(s) 1547
SmlI CTYRAG 2 cut(s) 119, 398
SmoI CTYRAG 2 cut(s) 119, 398
SphI GCATGC 1 cut(s) 1129
SsiI CCGC 7 cut(s) 273, 323, 333, 788, 902, 1703, 1794
SspDI GGCGCC 1 cut(s) 1816
SspI AATATT 1 cut(s) 1806
SspMI CTAG 8 cut(s) 39, 338, 575, 776, 920, 1211, 1554, 1568
StyD4I CCNGG 8 cut(s) 129, 239, 366, 388, 1444, 1476, 1723, 1827
StyI CCWWGG 2 cut(s) 1080, 1542
TaaI ACNGT 5 cut(s) 64, 181, 677, 1016, 1417
TaiI ACGT 5 cut(s) 662, 808, 1041, 1197, 1631
TaqI TCGA 3 cut(s) 363, 409, 972
TaqII GACCGA 2 cut(s) 44, 1486
TatI WGTACW 2 cut(s) 44, 782
TauI GCSGC 2 cut(s) 326, 905
TfiI GAWTC 1 cut(s) 703
Tru1I TTAA 9 cut(s) 416, 828, 1073, 1190, 1278, 1296, 1890, 1952, 1993
Tru9I TTAA 9 cut(s) 416, 828, 1073, 1190, 1278, 1296, 1890, 1952, 1993
TscAI CASTG 4 cut(s) 184, 504, 705, 1647
TseFI GTSAC 1 cut(s) 383
Tsp45I GTSAC 1 cut(s) 383
TspDTI ATGAA 6 cut(s) 86, 176, 729, 1671, 1675, 1902
TspGWI ACGGA 2 cut(s) 1282, 1474
TspRI CASTG 4 cut(s) 184, 504, 705, 1647
VpaK11BI GGWCC 2 cut(s) 812, 1469
VspI ATTAAT 1 cut(s) 1952
XapI RAATTY 4 cut(s) 980, 1186, 1603, 1780
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 1 cut(s) 1129
XmiI GTMKAC 1 cut(s) 972
XspI CTAG 8 cut(s) 39, 338, 575, 776, 920, 1211, 1554, 1568
ZrmI AGTACT 1 cut(s) 46
Zsp2I ATGCAT 1 cut(s) 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.