RLG00000000998

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000489
Physical Location & Seq
Forward (+)
9077732 .. 9080855
3124 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000998

Sequence Viewer

Length: 2106 bp
ATGAATCCCTCTGATTCAGCTGAGACAGAGATCAGTAGTCCAACATTGGCCTATCATGCCATGATACTAGAGGAGACCAATACAGTGTTCTGTTCTGAATGGAATCAGCAGAAATCTACACCAGTTAAGAGAAGCTTAAGCGGCATGGATACTAAGGTGTTCAAGGCGGCACGAGAGGGCAATATTGATGCCCTTAGAGAACATAGCAGTGCAAGGTTGACAGAGTCTGAAGAATTGCTGAAATCAGCCGAGGTTGTAAGGGAGATGCTTAAAATGTGCCAGCGGCTACTATTGCAGCCAAACGAGAGCGGTGATACTGCCTTACACTTGGCGGCAAGACACGGACGTGCTGACATAGTTGAAGTTCTTATTCGGGCTGCAAAAGACTGGCATGGCGACCTCGAGGCATCAAAAGACGTATACTACCAGTTTCTCATTAGAAGACCTAACGAGGAGAAAAACACAGCCTTGCACGAGGCAGTGCGGTTCGATCACCTTGATGTGGTTAAGATATTGACTAGGGAAGACCCCGAGTTTTTGTACTCAGCTAATAATGGTGGGGAAACTCCGCTCTACATGGCTGCCGAGAGGGGATATCCAAAATTGGTTTTTGAAATGCTCGACACTAGCACGAATCCATCCTACCAAGGACCCGATGGTATAACAGCTTTACACGCTGCAGCTACCTACGGTGATGAACAATTAACGAGAAGATTACTTGAGATGGAAAGGACGCTAGCAACAGCATCTGACGCACTAGGAAGGACTCCACTTCATTTGGCTGCAGTTAAGGGTCGCGTTTCAATTGTGAAACAAATACTGGAATGTGATAAGTCCACTGCCTACATTGTCAACATTTACAAGATGACACCCGTTCATTATGCAGCCTATGCAGGGCATGTAGATGTACTGGAACAGCTTATTTTCTATTGCCCGGACGGTTGCGAATTGGTGGACCAAAACGGTCGCAATGCCCTACATTTAGCAATTATCGGTTATAAAGAAAAAGTAGAAGAGTTTGTTCGGAAAGATCCATGGCTTAGTAGCGTCCTTTTAAATGGCAAAGATTCTGTCGGAAACACACCTCTCCATCAAATTGCTACTTCTCATGAATACGATGGCTTGGAATTTATCAGTGATTCTAGAGTTGATAAGATGGCATTCAACAGAAAAAATAAGAACGCGCTAGACATCATTCTGCATAGAGCTGATTCTCAGTGGAAGAGGAACCTCATACAAGGGTTGAGAAATTTTGGTGCAAGAGAGAGTCAACGAGTGTCAAGAGACAAAGGTGGTGACAGAGAGTCAAAATACAAGGAAATAAAAAAATCTCATATGGTAGTATCTGCACTCATAGCAACTTTAACCTTCGCAGCAGGTTTCACTGTGCCTGGTGGTTACCAAAGTGAAAAAGGGCCAGATCAAGGTTTTGCAGTTCTATCAAGAAATGCAGCTTTCAAGGCGTTTGTGATAACAAATACATTATCCATGACTCTGTCCAGTAGTGCGGTCATGCTACGCTTTCTCTCATCACTGAACTGGTCAGATTCATTATTATGTGTGGCGCTAAATTGTACCTTTTTCGCTCTGATTGCAATGGTGGCTGCATTCCTTACCGGTGCATATGCAGTATTAGGGGGTCATTCTTCATTAGGACTTGCCATTGCGAATTGTGTGCTTGGGGCTGGCTTCTTCTCGGCTATATGTTTTGTCTCTATTTCTCCAGCTTTCAGTACTTTTTGTAATCGTGTCTCTCTTCTCCATCGCCGCATAATTACCCTAGCCTGCTCGGATTGGAATCACAGAACTTCTAGGCCCAACATGGACGAAGAGTTGAGGTCTACAATTTTTAAGGTTCAGCCCAAATGTGCCCAACCCGAGTGCCATAATGGGAATTTCGTGGCCCATCTCACAGCTGGCCCAACAAGAGGAAGAGTGAGCGCCATTCCCTTGAAATCAAAACCACCAAACAGAGACACTAAATCAAAGAGACAGAAAGAGGATAACCAAATCCGTAGGGATCAAGCGATTGAATTGGGGGCCTCGATCTTCTTCTTGTTCGCCGATCCACGATCAGGTCAGTACGTAGCCTTCGATTTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

702

Amino Acids

77.93

Weight (kDa)

7.6

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 145 - 208 5.9e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 191 - 277 2.7e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 224 - 271 5.8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 269 - 341 6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 293 - 385 1.8e-09 Ankyrin repeats (3 copies)
PGG PF13962 436 - 544 5.5e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
AbsI CCTCGAGG 1 cut(s) 401
Acc36I ACCTGC 1 cut(s) 1367
AccBSI CCGCTC 2 cut(s) 309, 571
AccI GTMKAC 2 cut(s) 420, 1841
AccII CGCG 2 cut(s) 798, 1184
AciI CCGC 9 cut(s) 141, 167, 283, 309, 332, 484, 569, 1508, 1768
AclWI GGATC 3 cut(s) 1025, 2028, 2060
AcsI RAATTY 3 cut(s) 1127, 1249, 1894
AcuI CTGAAG 1 cut(s) 249
AfaI GTAC 5 cut(s) 542, 909, 1576, 1735, 2084
AfiI CCNNNNNNNGG 5 cut(s) 502, 894, 1424, 1928, 2075
AflII CTTAAG 1 cut(s) 136
AgeI ACCGGT 1 cut(s) 1616
AgsI TTSAA 8 cut(s) 163, 362, 614, 804, 1165, 1459, 1954, 2033
AhdI GACNNNNNGTC 1 cut(s) 1303
AjiI CACGTC 1 cut(s) 347
AjnI CCWGG 1 cut(s) 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 71, 103
AleI CACNNNNGTG 1 cut(s) 345
Alw26I GTCTC 7 cut(s) 17, 68, 1278, 1717, 1756, 1968, 1984
AlwI GGATC 3 cut(s) 1025, 2028, 2060
AlwNI CAGNNNCTG 2 cut(s) 227, 749
Ama87I CYCGRG 3 cut(s) 401, 530, 1877
AoxI GGCC 6 cut(s) 48, 1415, 1814, 1902, 1918, 2040
ApoI RAATTY 3 cut(s) 1127, 1249, 1894
ArsI GACNNNNNNTTYG 2 cut(s) 1056, 1088
AsiGI ACCGGT 1 cut(s) 1616
AspLEI GCGC 3 cut(s) 1186, 1567, 1943
AspS9I GGNCC 7 cut(s) 650, 955, 1415, 1815, 1903, 1919, 2040
AsuC2I CCSGG 1 cut(s) 935
AsuHPI GGTGA 4 cut(s) 323, 485, 704, 1307
AsuNHI GCTAGC 1 cut(s) 736
AvaI CYCGRG 3 cut(s) 401, 530, 1877
AvaII GGWCC 2 cut(s) 650, 955
BaeGI GKGCMC 1 cut(s) 1873
BaeI ACNNNNGTAYC 2 cut(s) 141, 174
BarI GAAGNNNNNNTAC 1 cut(s) 2075
BauI CACGAG 2 cut(s) 171, 473
BbsI GAAGAC 2 cut(s) 448, 531
BccI CCATC 8 cut(s) 646, 650, 718, 1098, 1112, 1150, 1770, 1914
BcgI CGANNNNNNTGC 2 cut(s) 1657, 1691
BciT130I CCWGG 1 cut(s) 1392
BciVI GTATCC 1 cut(s) 142
BcnI CCSGG 1 cut(s) 935
BcoDI GTCTC 7 cut(s) 17, 68, 1278, 1717, 1756, 1968, 1984
BfmI CTRYAG 2 cut(s) 678, 783
BfoI RGCGCY 2 cut(s) 1568, 1944
BfrI CTTAAG 1 cut(s) 136
BfuAI ACCTGC 1 cut(s) 1367
BfuI GTATCC 1 cut(s) 142
BmcAI AGTACT 1 cut(s) 1735
Bme1390I CCNGG 2 cut(s) 935, 1392
Bme18I GGWCC 2 cut(s) 650, 955
BmeRI GACNNNNNGTC 1 cut(s) 1303
BmeT110I CYCGRG 3 cut(s) 401, 530, 1877
BmgBI CACGTC 1 cut(s) 347
BmgT120I GGNCC 7 cut(s) 650, 955, 1415, 1815, 1903, 1919, 2040
BmiI GGNNCC 3 cut(s) 652, 1229, 2041
BmrFI CCNGG 2 cut(s) 935, 1392
BmsI GCATC 4 cut(s) 178, 255, 416, 755
BmtI GCTAGC 1 cut(s) 740
BpiI GAAGAC 2 cut(s) 448, 531
BpmI CTGGAG 1 cut(s) 1707
BpuEI CTTGAG 1 cut(s) 740
BpuMI CCSGG 1 cut(s) 935
BsaAI YACGTR 1 cut(s) 2086
BsaBI GATNNNNATC 1 cut(s) 1797
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 3 cut(s) 249, 646, 1034
BsaWI WCCGGW 1 cut(s) 1616
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 894, 1424, 1928, 2075
Bse118I RCCGGY 1 cut(s) 1616
Bse1I ACTGG 7 cut(s) 122, 392, 427, 825, 915, 1500, 1544
Bse3DI GCAATG 3 cut(s) 976, 1602, 1662
Bse8I GATNNNNATC 1 cut(s) 1797
BseBI CCWGG 1 cut(s) 1392
BseDI CCNNGG 3 cut(s) 249, 646, 1034
BseGI GGATG 1 cut(s) 638
BseJI GATNNNNATC 1 cut(s) 1797
BseLI CCNNNNNNNGG 5 cut(s) 502, 894, 1424, 1928, 2075
BseMI GCAATG 3 cut(s) 976, 1602, 1662
BseMII CTCAG 3 cut(s) 12, 558, 1229
BseNI ACTGG 7 cut(s) 122, 392, 427, 825, 915, 1500, 1544
BseRI GAGGAG 2 cut(s) 86, 467
BseSI GKGCMC 1 cut(s) 1873
BsgI GTGCAG 1 cut(s) 1332
Bsh1236I CGCG 2 cut(s) 798, 1184
Bsh1285I CGRYCG 1 cut(s) 967
BshFI GGCC 6 cut(s) 50, 1417, 1816, 1904, 1920, 2042
BshTI ACCGGT 1 cut(s) 1616
BsiEI CGRYCG 1 cut(s) 967
BsiHKCI CYCGRG 3 cut(s) 401, 530, 1877
BsiSI CCGG 2 cut(s) 935, 1617
BslI CCNNNNNNNGG 5 cut(s) 502, 894, 1424, 1928, 2075
BsmAI GTCTC 7 cut(s) 17, 68, 1278, 1717, 1756, 1968, 1984
BsmI GAATGC 2 cut(s) 1160, 1607
BsnI GGCC 6 cut(s) 50, 1417, 1816, 1904, 1920, 2042
Bso31I GGTCTC 1 cut(s) 68
BsoBI CYCGRG 3 cut(s) 401, 530, 1877
Bsp1286I GDGCHC 1 cut(s) 1873
Bsp143I GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
Bsp19I CCATGG 1 cut(s) 1034
BspACI CCGC 9 cut(s) 141, 167, 283, 309, 332, 484, 569, 1508, 1768
BspANI GGCC 6 cut(s) 50, 1417, 1816, 1904, 1920, 2042
BspCNI CTCAG 3 cut(s) 13, 557, 1228
BspFNI CGCG 2 cut(s) 798, 1184
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 3 cut(s) 652, 1229, 2041
BspMAI CTGCAG 2 cut(s) 682, 787
BspMI ACCTGC 1 cut(s) 1367
BspOI GCTAGC 1 cut(s) 740
BspPI GGATC 3 cut(s) 1025, 2028, 2060
BspTI CTTAAG 1 cut(s) 136
BspTNI GGTCTC 1 cut(s) 68
BsrBI CCGCTC 2 cut(s) 309, 571
BsrDI GCAATG 3 cut(s) 976, 1602, 1662
BsrFI RCCGGY 1 cut(s) 1616
BsrI ACTGG 7 cut(s) 122, 392, 427, 825, 915, 1500, 1544
BssAI RCCGGY 1 cut(s) 1616
BssECI CCNNGG 3 cut(s) 249, 646, 1034
BssMI GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
BssNAI GTATAC 1 cut(s) 421
BssSI CACGAG 2 cut(s) 171, 473
BssT1I CCWWGG 2 cut(s) 646, 1034
Bst1107I GTATAC 1 cut(s) 421
Bst2BI CACGAG 2 cut(s) 171, 473
Bst2UI CCWGG 1 cut(s) 1392
Bst4CI ACNGT 5 cut(s) 85, 692, 941, 965, 1387
Bst6I CTCTTC 5 cut(s) 1008, 1217, 1761, 1824, 1927
BstAFI CTTAAG 1 cut(s) 136
BstAPI GCANNNNNTGC 1 cut(s) 890
BstBAI YACGTR 1 cut(s) 2086
BstC8I GCNNGC 5 cut(s) 281, 738, 1687, 1786, 1918
BstDEI CTNAG 6 cut(s) 21, 153, 194, 544, 1040, 1215
BstDSI CCRYGG 1 cut(s) 1034
BstEII GGTNACC 1 cut(s) 1397
BstF5I GGATG 1 cut(s) 638
BstFNI CGCG 2 cut(s) 798, 1184
BstH2I RGCGCY 2 cut(s) 1568, 1944
BstHHI GCGC 3 cut(s) 1186, 1567, 1943
BstKTI GATC 8 cut(s) 33, 493, 1033, 1423, 2023, 2049, 2068, 2075
BstMAI GTCTC 7 cut(s) 17, 68, 1278, 1717, 1756, 1968, 1984
BstMBI GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
BstMCI CGRYCG 1 cut(s) 967
BstNI CCWGG 1 cut(s) 1392
BstNSI RCATGY 1 cut(s) 902
BstPI GGTNACC 1 cut(s) 1397
BstSCI CCNGG 2 cut(s) 933, 1390
BstSFI CTRYAG 2 cut(s) 678, 783
BstSLI GKGCMC 1 cut(s) 1873
BstSNI TACGTA 1 cut(s) 2086
BstUI CGCG 2 cut(s) 798, 1184
BstV2I GAAGAC 2 cut(s) 448, 531
BstX2I RGATCY 1 cut(s) 1030
BstYI RGATCY 1 cut(s) 1030
BstZ17I GTATAC 1 cut(s) 421
BsuI GTATCC 1 cut(s) 142
BsuRI GGCC 6 cut(s) 50, 1417, 1816, 1904, 1920, 2042
BtgI CCRYGG 1 cut(s) 1034
BtgZI GCGATG 1 cut(s) 1748
BtrI CACGTC 1 cut(s) 347
BtsCI GGATG 1 cut(s) 638
BtsI GCAGTG 3 cut(s) 214, 486, 837
BtsIMutI CAGTG 8 cut(s) 90, 214, 486, 837, 1141, 1223, 1383, 1532
BveI ACCTGC 1 cut(s) 1367
Cac8I GCNNGC 5 cut(s) 281, 738, 1687, 1786, 1918
CaiI CAGNNNCTG 2 cut(s) 227, 749
CciI TCATGA 1 cut(s) 1108
CfoI GCGC 3 cut(s) 1186, 1567, 1943
Cfr10I RCCGGY 1 cut(s) 1616
Cfr13I GGNCC 7 cut(s) 650, 955, 1415, 1815, 1903, 1919, 2040
CseI GACGC 3 cut(s) 742, 761, 1036
Csp6I GTAC 5 cut(s) 541, 908, 1575, 1734, 2083
CspAI ACCGGT 1 cut(s) 1616
CspCI CAANNNNNGTGG 2 cut(s) 759, 794
CviQI GTAC 5 cut(s) 541, 908, 1575, 1734, 2083
DdeI CTNAG 6 cut(s) 21, 153, 194, 544, 1040, 1215
DpnI GATC 8 cut(s) 32, 492, 1032, 1422, 2022, 2048, 2067, 2074
DpnII GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
DraI TTTAAA 1 cut(s) 1056
DriI GACNNNNNGTC 1 cut(s) 1303
Eam1104I CTCTTC 5 cut(s) 1008, 1217, 1761, 1824, 1927
Eam1105I GACNNNNNGTC 1 cut(s) 1303
EarI CTCTTC 5 cut(s) 1008, 1217, 1761, 1824, 1927
Eco105I TACGTA 1 cut(s) 2086
Eco130I CCWWGG 2 cut(s) 646, 1034
Eco31I GGTCTC 1 cut(s) 68
Eco32I GATATC 1 cut(s) 596
Eco47I GGWCC 2 cut(s) 650, 955
Eco57I CTGAAG 1 cut(s) 249
Eco88I CYCGRG 3 cut(s) 401, 530, 1877
Eco91I GGTNACC 1 cut(s) 1397
EcoO109I RGGNCCY 2 cut(s) 650, 2040
EcoO65I GGTNACC 1 cut(s) 1397
EcoRII CCWGG 1 cut(s) 1390
EcoRV GATATC 1 cut(s) 596
EcoT14I CCWWGG 2 cut(s) 646, 1034
ErhI CCWWGG 2 cut(s) 646, 1034
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FauNDI CATATG 2 cut(s) 1335, 1624
FblI GTMKAC 2 cut(s) 420, 1841
FokI GGATG 1 cut(s) 625
GlaI GCGC 3 cut(s) 1185, 1566, 1942
GsuI CTGGAG 1 cut(s) 1707
HaeII RGCGCY 2 cut(s) 1568, 1944
HaeIII GGCC 6 cut(s) 50, 1417, 1816, 1904, 1920, 2042
HapII CCGG 2 cut(s) 935, 1617
HgaI GACGC 3 cut(s) 742, 761, 1036
HhaI GCGC 3 cut(s) 1186, 1567, 1943
Hin6I GCGC 3 cut(s) 1184, 1565, 1941
HinP1I GCGC 3 cut(s) 1184, 1565, 1941
HincII GTYRAC 3 cut(s) 219, 853, 1271
HindII GTYRAC 3 cut(s) 219, 853, 1271
HindIII AAGCTT 1 cut(s) 133
HpaII CCGG 2 cut(s) 935, 1617
HphI GGTGA 4 cut(s) 323, 485, 704, 1307
Hpy166II GTNNAC 7 cut(s) 219, 421, 837, 853, 955, 1271, 1842
Hpy188I TCNGA 9 cut(s) 13, 97, 229, 751, 1026, 1076, 1546, 1590, 1792
Hpy188III TCNNGA 4 cut(s) 1109, 1143, 1281, 1443
Hpy8I GTNNAC 7 cut(s) 219, 421, 837, 853, 955, 1271, 1842
HpyAV CCTTC 3 cut(s) 756, 1378, 2101
HpyCH4III ACNGT 5 cut(s) 85, 692, 941, 965, 1387
HpyCH4IV ACGT 3 cut(s) 346, 417, 2085
HpyF3I CTNAG 6 cut(s) 21, 153, 194, 544, 1040, 1215
HpySE526I ACGT 3 cut(s) 346, 417, 2085
HspAI GCGC 3 cut(s) 1184, 1565, 1941
Kzo9I GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
LweI GCATC 4 cut(s) 178, 255, 416, 755
MaeII ACGT 3 cut(s) 346, 417, 2085
MaeIII GTNAC 2 cut(s) 1295, 1397
MalI GATC 8 cut(s) 32, 492, 1032, 1422, 2022, 2048, 2067, 2074
MbiI CCGCTC 2 cut(s) 309, 571
MboI GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
MfeI CAATTG 1 cut(s) 804
MflI RGATCY 1 cut(s) 1030
MhlI GDGCHC 1 cut(s) 1873
MlyI GAGTC 5 cut(s) 233, 760, 1276, 1313, 1486
MmeI TCCRAC 2 cut(s) 65, 1054
MseI TTAA 9 cut(s) 126, 137, 270, 507, 704, 789, 1055, 1364, 1851
MslI CAYNNNNRTG 5 cut(s) 207, 345, 498, 903, 1555
MspA1I CMGCKG 3 cut(s) 20, 283, 1916
MspCI CTTAAG 1 cut(s) 136
MspI CCGG 2 cut(s) 935, 1617
MspR9I CCNGG 2 cut(s) 935, 1392
MunI CAATTG 1 cut(s) 804
Mva1269I GAATGC 2 cut(s) 1160, 1607
MvaI CCWGG 1 cut(s) 1392
MvnI CGCG 2 cut(s) 798, 1184
NciI CCSGG 1 cut(s) 935
NcoI CCATGG 1 cut(s) 1034
NdeI CATATG 2 cut(s) 1335, 1624
NdeII GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
NheI GCTAGC 1 cut(s) 736
NlaIV GGNNCC 3 cut(s) 652, 1229, 2041
NmeAIII GCCGAG 3 cut(s) 274, 610, 1676
NmuCI GTSAC 1 cut(s) 1295
NspI RCATGY 1 cut(s) 902
OliI CACNNNNGTG 1 cut(s) 345
PaeR7I CTCGAG 1 cut(s) 401
PagI TCATGA 1 cut(s) 1108
PcsI WCGNNNNNNNCGW 1 cut(s) 2091
PctI GAATGC 2 cut(s) 1160, 1607
PfeI GAWTC 9 cut(s) 4, 14, 103, 634, 1067, 1139, 1211, 1547, 1798
PflFI GACNNNGTC 2 cut(s) 223, 1495
PinAI ACCGGT 1 cut(s) 1616
PleI GAGTC 5 cut(s) 232, 760, 1275, 1312, 1486
PpsI GAGTC 5 cut(s) 232, 760, 1275, 1312, 1486
Ppu21I YACGTR 1 cut(s) 2086
PpuMI RGGWCCY 1 cut(s) 650
PsiI TTATAA 1 cut(s) 999
Psp5II RGGWCCY 1 cut(s) 650
Psp6I CCWGG 1 cut(s) 1390
PspEI GGTNACC 1 cut(s) 1397
PspGI CCWGG 1 cut(s) 1390
PspN4I GGNNCC 3 cut(s) 652, 1229, 2041
PspPI GGNCC 7 cut(s) 650, 955, 1415, 1815, 1903, 1919, 2040
PspPPI RGGWCCY 1 cut(s) 650
PspXI VCTCGAGB 1 cut(s) 401
PstI CTGCAG 2 cut(s) 682, 787
PstNI CAGNNNCTG 2 cut(s) 227, 749
PsuI RGATCY 1 cut(s) 1030
PsyI GACNNNGTC 2 cut(s) 223, 1495
PvuII CAGCTG 2 cut(s) 20, 1916
RsaI GTAC 5 cut(s) 542, 909, 1576, 1735, 2084
RsaNI GTAC 5 cut(s) 541, 908, 1575, 1734, 2083
RseI CAYNNNNRTG 5 cut(s) 207, 345, 498, 903, 1555
SaqAI TTAA 9 cut(s) 126, 137, 270, 507, 704, 789, 1055, 1364, 1851
Sau3AI GATC 8 cut(s) 30, 490, 1030, 1420, 2020, 2046, 2065, 2072
Sau96I GGNCC 7 cut(s) 650, 955, 1415, 1815, 1903, 1919, 2040
ScaI AGTACT 1 cut(s) 1735
SchI GAGTC 5 cut(s) 233, 760, 1276, 1313, 1486
ScrFI CCNGG 2 cut(s) 935, 1392
SduI GDGCHC 1 cut(s) 1873
SfaNI GCATC 4 cut(s) 178, 255, 416, 755
SfcI CTRYAG 2 cut(s) 678, 783
Sfr274I CTCGAG 1 cut(s) 401
SinI GGWCC 2 cut(s) 650, 955
SlaI CTCGAG 1 cut(s) 401
SmiMI CAYNNNNRTG 5 cut(s) 207, 345, 498, 903, 1555
SmlI CTYRAG 3 cut(s) 136, 401, 719
SmoI CTYRAG 3 cut(s) 136, 401, 719
SnaBI TACGTA 1 cut(s) 2086
SsiI CCGC 9 cut(s) 141, 167, 283, 309, 332, 484, 569, 1508, 1768
SspI AATATT 1 cut(s) 184
StyD4I CCNGG 2 cut(s) 933, 1390
StyI CCWWGG 2 cut(s) 646, 1034
TaaI ACNGT 5 cut(s) 85, 692, 941, 965, 1387
TaiI ACGT 3 cut(s) 349, 420, 2088
TaqI TCGA 5 cut(s) 402, 489, 621, 2045, 2094
TatI WGTACW 3 cut(s) 540, 907, 1733
TauI GCSGC 5 cut(s) 144, 170, 286, 335, 1770
TfiI GAWTC 9 cut(s) 4, 14, 103, 634, 1067, 1139, 1211, 1547, 1798
Tru1I TTAA 9 cut(s) 126, 137, 270, 507, 704, 789, 1055, 1364, 1851
Tru9I TTAA 9 cut(s) 126, 137, 270, 507, 704, 789, 1055, 1364, 1851
TscAI CASTG 8 cut(s) 90, 214, 486, 844, 1141, 1223, 1390, 1539
TseFI GTSAC 1 cut(s) 1295
Tsp45I GTSAC 1 cut(s) 1295
TspDTI ATGAA 7 cut(s) 17, 711, 764, 866, 1125, 1539, 1638
TspGWI ACGGA 2 cut(s) 357, 2003
TspRI CASTG 8 cut(s) 90, 214, 486, 844, 1141, 1223, 1390, 1539
Tth111I GACNNNGTC 2 cut(s) 223, 1495
Vha464I CTTAAG 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 650, 955
XapI RAATTY 3 cut(s) 1127, 1249, 1894
XbaI TCTAGA 1 cut(s) 1142
XceI RCATGY 1 cut(s) 902
XcmI CCANNNNNNNNNTGG 2 cut(s) 653, 1913
XhoI CTCGAG 1 cut(s) 401
XmiI GTMKAC 2 cut(s) 420, 1841
ZrmI AGTACT 1 cut(s) 1735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.