Rh2AG112200

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000489
Physical Location & Seq
Reverse (-)
9999546 .. 10008992
9447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG112200.1

Sequence Viewer

Length: 2103 bp
ATGGACCAACCTTCCACTTCTTCTGACAATGAGAGTGGTGAAGGAACACAGCTCGAGATTGAGAAGGATCGGGCAATAGCAGCTAAAGCTGAATCCAGCCAAGAAGTTGAAGCACAAGATGAATGCTTAACTGGCATGGATCTTCCAGCATACAGGGCCGCAACAACAGGCAATATTGATTTCCTTGTGTTACACGGAGAGCATCTATCCCAAATATTGACTCCAACAAAGAACACAGTTCTCCATATTTATATTGCATGCGCAAAGAGAAGCCGGACGTCATCGAAAAACACAGCCAGCATCAATACGGTTACAAGAATCCTCGACATGTGTCCAGGACTGCTATTGCAAGCCAACGAGAAAGGTGACACAACCTTACATGTGGCCGCGAAACACGGGCATGATCACATAGTTGAACATCTTATCAAGTTGGCTAGAGCTCGTCAGGAGGAAGCTTGTTGCCAGCTGCTCATCAGGACAGTCAATCATGACGGAGACACGGCCTTGCACGAAGCAGTGCGCTTCAATCACCTCACTGTGGTGGAGATATTGACCAGAGCAGACCCCGAGGCTTTGTACTCTGCTAATGATGCAGGAGAGACCCCACTCTACATGGCTGCTCAAAGAGGTTATAATTCTTTGGTTTCTGAAATACTTGAGACTTGCACAAATCCAAGTTATGAAGGTCCTGATGGTAGAACTGCATTGCACGCTTCGGTGATCTACAATGATCGGGATCTCATGAGCAAATTACTAGACTACTTCACTGGCGATAGAGCATTGACAAAAGCAGTTGATAAACAAGGATGGACTCCACTTCACTTTGCTGCATTTTTCGGCCACTCTTTAATTGTAAAGCACTTGCTAAGAGCTGATGAATCTGCGGCTTATGTTCGTGACAAAAATGATAAGAAGACGGCCCTTCACATTGCTGTCTCCAAAGGTCATCTAGATGTAATGAAAGAGCTGATTTCTCATTGCCCTGATTGTTGCGAGCTGGTCGACAAGAGGCATCAAAATGTTCTTCACTATGCAATTGAGAATAAAAGATTTGAAATACAAGATTTTGTTCAGAAAGACCCCTGGCTTAGCAATGTTCTCTTAAATGGCAAAGATGATAACCAAAATACACCTTTTCATCAACTTGCTGCTTCTTTCTACAAATTCCGTCACGTGAGTCGGGCTGGTTCTGAAATTATTGACTCGAGCAAGGATTTCATAAGTGATGCTAGAGTTGATAAGATGGCATTCAATAAGGAACACCTGACTGCTTTGGATATGATTCAAGCTAACCATAGTTTTTCGCGACTAGAGAAGAAATATGTGCAAAGGCTCTCTTCGAAAGTGAACAGTGGCAGACCAGGTTATCACACTGTAAACGACGAAATCAAAGGAAATAAAGACAAAGAGATCCTAATTGAGAGGAAGGAAGCAACTAATCAAATAGTGAAGGAATTAAAACAATCGCATCTCATAGCAACTGTAACCTTCACAGCAGTTGGTGTCTCTGATTCAAATCTCATTGCTTCTGGCTCTGGGGGTTCACAGTTTAGAGTCTCGGAAATGGTAACAGATGCAGATTTGAAGTTTCTGATTGAAAATTTGGACGAGAAGATCGGTCAGAATAAGAAATGGGACAATGTCATAGAGAAAGGAAATGGTCTTCTATACTACAGTGCTAAGTGTTGCAAGCCTAAGGTTGGTCCTGTGAAATACTTGAGTGTGACAATATTTGAGGACTGCTCTCCTGAGATGCTGAAAGACTTCTACATGGATAATGATTACAAAAAGCAATGCGATAAAATGCTGATTGAGCATGAACAGTTACATGTGGACAAAAACAATGGGGTTGAAGTTGGCCGGACAATAAAGAAGTTTCCACTGTTGACACCTAGAGAATATGTATTAGATTGGAGATTGTGGGAAGGAAAAGATAAAACATTCTACTGTTTTGTCAAGGTACCCCTACTGTTTAGTTTTTGGCTCGACGCGGAGAGAGGAGTGCAGAGGAGGAAGGGAGAGAAAAGGAGAGTTTGTTTATGCTGTGCCCAGAATAGACCAATAGAAATCGGAGAAGCTAATCCAGAAATTGGATTTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

700

Amino Acids

78.94

Weight (kDa)

6.35

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 118 - 188 2.3e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 196 - 254 4.6e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 203 - 290 2.5e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 284 - 353 2e-10 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 633
AatII GACGTC 1 cut(s) 281
Acc16I TGCGCA 1 cut(s) 262
Acc65I GGTACC 1 cut(s) 1960
AccB1I GGYRCC 1 cut(s) 1960
AccB7I CCANNNNNTGG 1 cut(s) 2090
AccI GTMKAC 1 cut(s) 1002
AccII CGCG 3 cut(s) 389, 1306, 1991
AciI CCGC 4 cut(s) 159, 387, 884, 1991
AclWI GGATC 4 cut(s) 75, 147, 744, 1405
AcoI YGGCCR 3 cut(s) 384, 838, 1858
AcsI RAATTY 2 cut(s) 1163, 1600
AcvI CACGTG 1 cut(s) 1174
AcyI GRCGYC 1 cut(s) 278
AfaI GTAC 2 cut(s) 578, 1962
AfiI CCNNNNNNNGG 3 cut(s) 538, 1700, 2090
AflIII ACRYGT 3 cut(s) 327, 379, 1828
AjnI CCWGG 3 cut(s) 334, 1082, 1360
AleI CACNNNNGTG 1 cut(s) 539
Alw21I GWGCWC 1 cut(s) 442
Alw26I GTCTC 6 cut(s) 489, 593, 653, 940, 1510, 1561
AlwI GGATC 4 cut(s) 75, 147, 744, 1405
Ama87I CYCGRG 3 cut(s) 53, 566, 1204
AoxI GGCC 6 cut(s) 156, 384, 501, 838, 918, 1858
ApeKI GCWGC 5 cut(s) 80, 466, 617, 827, 1148
ApoI RAATTY 2 cut(s) 1163, 1600
Asp700I GAANNNNTTC 1 cut(s) 1763
Asp718I GGTACC 1 cut(s) 1960
AspLEI GCGC 2 cut(s) 263, 522
AspS9I GGNCC 5 cut(s) 4, 156, 686, 919, 1703
AsuHPI GGTGA 4 cut(s) 50, 377, 521, 730
AsuII TTCGAA 1 cut(s) 1340
AvaI CYCGRG 3 cut(s) 53, 566, 1204
AvaII GGWCC 3 cut(s) 4, 686, 1703
AxyI CCTNAGG 1 cut(s) 1695
BaeGI GKGCMC 1 cut(s) 2050
BanI GGYRCC 1 cut(s) 1960
BanII GRGCYC 1 cut(s) 442
BbrPI CACGTG 1 cut(s) 1174
BbsI GAAGAC 2 cut(s) 920, 1655
Bbv12I GWGCWC 1 cut(s) 442
BbvI GCAGC 5 cut(s) 92, 453, 604, 814, 1135
BccI CCATC 3 cut(s) 686, 801, 1237
BceAI ACGGC 2 cut(s) 516, 933
BciT130I CCWGG 3 cut(s) 336, 1084, 1362
BclI TGATCA 1 cut(s) 403
BcoDI GTCTC 6 cut(s) 489, 593, 653, 940, 1510, 1561
BfaI CTAG 6 cut(s) 435, 755, 950, 1230, 1310, 1893
BfmI CTRYAG 1 cut(s) 1672
BisI GCNGC 8 cut(s) 81, 159, 387, 467, 618, 828, 885, 1149
BlpI GCTNAGC 1 cut(s) 1088
BlsI GCNGC 8 cut(s) 82, 160, 388, 468, 619, 829, 886, 1150
Bme1390I CCNGG 3 cut(s) 336, 1084, 1362
Bme18I GGWCC 3 cut(s) 4, 686, 1703
BmeT110I CYCGRG 3 cut(s) 53, 566, 1204
BmgT120I GGNCC 5 cut(s) 4, 156, 686, 919, 1703
BmiI GGNNCC 1 cut(s) 1962
BmrFI CCNGG 3 cut(s) 336, 1084, 1362
BmsI GCATC 8 cut(s) 211, 309, 580, 1021, 1216, 1477, 1564, 1743
BoxI GACNNNNGTC 1 cut(s) 330
BpiI GAAGAC 2 cut(s) 920, 1655
BplI GAGNNNNNCTC 2 cut(s) 1727, 1759
Bpu1102I GCTNAGC 1 cut(s) 1088
Bpu14I TTCGAA 1 cut(s) 1340
BpuEI CTTGAG 2 cut(s) 677, 1738
BsaAI YACGTR 1 cut(s) 1174
BsaBI GATNNNNATC 2 cut(s) 735, 1515
BsaHI GRCGYC 1 cut(s) 278
BsaI GGTCTC 1 cut(s) 593
BsaJI CCNNGG 2 cut(s) 567, 1082
BsaXI ACNNNNNCTCC 2 cut(s) 2020, 2050
Bsc4I CCNNNNNNNGG 3 cut(s) 538, 1700, 2090
Bse1I ACTGG 2 cut(s) 136, 772
Bse21I CCTNAGG 1 cut(s) 1695
Bse3DI GCAATG 6 cut(s) 704, 927, 976, 1099, 1521, 1799
Bse8I GATNNNNATC 2 cut(s) 735, 1515
BseBI CCWGG 3 cut(s) 336, 1084, 1362
BseDI CCNNGG 2 cut(s) 567, 1082
BseGI GGATG 1 cut(s) 812
BseJI GATNNNNATC 2 cut(s) 735, 1515
BseLI CCNNNNNNNGG 3 cut(s) 538, 1700, 2090
BseMI GCAATG 6 cut(s) 704, 927, 976, 1099, 1521, 1799
BseMII CTCAG 1 cut(s) 1740
BseNI ACTGG 2 cut(s) 136, 772
BseRI GAGGAG 2 cut(s) 2013, 2023
BseSI GKGCMC 1 cut(s) 2050
BseXI GCAGC 5 cut(s) 92, 453, 604, 814, 1135
BsgI GTGCAG 1 cut(s) 2024
Bsh1236I CGCG 3 cut(s) 389, 1306, 1991
BshFI GGCC 6 cut(s) 158, 386, 503, 840, 920, 1860
BshNI GGYRCC 1 cut(s) 1960
BsiHKAI GWGCWC 1 cut(s) 442
BsiHKCI CYCGRG 3 cut(s) 53, 566, 1204
BsiSI CCGG 2 cut(s) 274, 1861
BslFI GGGAC 1 cut(s) 1649
BslI CCNNNNNNNGG 3 cut(s) 538, 1700, 2090
BsmAI GTCTC 6 cut(s) 489, 593, 653, 940, 1510, 1561
BsmFI GGGAC 1 cut(s) 1649
BsmI GAATGC 2 cut(s) 128, 1247
BsnI GGCC 6 cut(s) 158, 386, 503, 840, 920, 1860
Bso31I GGTCTC 1 cut(s) 593
BsoBI CYCGRG 3 cut(s) 53, 566, 1204
Bsp119I TTCGAA 1 cut(s) 1340
Bsp1286I GDGCHC 2 cut(s) 442, 2050
Bsp143I GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
Bsp1720I GCTNAGC 1 cut(s) 1088
Bsp68I TCGCGA 1 cut(s) 1306
BspACI CCGC 4 cut(s) 159, 387, 884, 1991
BspANI GGCC 6 cut(s) 158, 386, 503, 840, 920, 1860
BspCNI CTCAG 1 cut(s) 1741
BspFNI CGCG 3 cut(s) 389, 1306, 1991
BspHI TCATGA 2 cut(s) 487, 741
BspLI GGNNCC 1 cut(s) 1962
BspPI GGATC 4 cut(s) 75, 147, 744, 1405
BspT104I TTCGAA 1 cut(s) 1340
BspT107I GGYRCC 1 cut(s) 1960
BspTNI GGTCTC 1 cut(s) 593
BsrDI GCAATG 6 cut(s) 704, 927, 976, 1099, 1521, 1799
BsrI ACTGG 2 cut(s) 136, 772
BssECI CCNNGG 2 cut(s) 567, 1082
BssMI GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
BssNI GRCGYC 1 cut(s) 278
Bst2UI CCWGG 3 cut(s) 336, 1084, 1362
Bst6I CTCTTC 1 cut(s) 1342
BstACI GRCGYC 1 cut(s) 278
BstBAI YACGTR 1 cut(s) 1174
BstBI TTCGAA 1 cut(s) 1340
BstC8I GCNNGC 7 cut(s) 259, 298, 351, 464, 711, 995, 1691
BstDEI CTNAG 5 cut(s) 866, 1088, 1680, 1695, 1749
BstF5I GGATG 1 cut(s) 812
BstFNI CGCG 3 cut(s) 389, 1306, 1991
BstHHI GCGC 2 cut(s) 263, 522
BstKTI GATC 8 cut(s) 70, 142, 406, 723, 733, 739, 1413, 1617
BstMAI GTCTC 6 cut(s) 489, 593, 653, 940, 1510, 1561
BstMBI GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
BstMWI GCNNNNNNNGC 7 cut(s) 80, 86, 132, 155, 590, 710, 1813
BstNI CCWGG 3 cut(s) 336, 1084, 1362
BstNSI RCATGY 4 cut(s) 261, 331, 383, 1832
BstPAI GACNNNNGTC 1 cut(s) 330
BstSCI CCNGG 3 cut(s) 334, 1082, 1360
BstSFI CTRYAG 1 cut(s) 1672
BstSLI GKGCMC 1 cut(s) 2050
BstUI CGCG 3 cut(s) 389, 1306, 1991
BstV1I GCAGC 5 cut(s) 92, 453, 604, 814, 1135
BstV2I GAAGAC 2 cut(s) 920, 1655
BstX2I RGATCY 3 cut(s) 139, 736, 1410
BstYI RGATCY 3 cut(s) 139, 736, 1410
Bsu36I CCTNAGG 1 cut(s) 1695
BsuRI GGCC 6 cut(s) 158, 386, 503, 840, 920, 1860
BtsCI GGATG 1 cut(s) 812
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 7 cut(s) 522, 534, 765, 1357, 1371, 1681, 1880
BtuMI TCGCGA 1 cut(s) 1306
Cac8I GCNNGC 7 cut(s) 259, 298, 351, 464, 711, 995, 1691
CciI TCATGA 2 cut(s) 487, 741
CfoI GCGC 2 cut(s) 263, 522
Cfr13I GGNCC 5 cut(s) 4, 156, 686, 919, 1703
CseI GACGC 1 cut(s) 1997
CsiI ACCWGGT 1 cut(s) 1360
Csp6I GTAC 2 cut(s) 577, 1961
CspCI CAANNNNNGTGG 2 cut(s) 16, 51
CviQI GTAC 2 cut(s) 577, 1961
DdeI CTNAG 5 cut(s) 866, 1088, 1680, 1695, 1749
DpnI GATC 8 cut(s) 69, 141, 405, 722, 732, 738, 1412, 1616
DpnII GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
EaeI YGGCCR 3 cut(s) 384, 838, 1858
Eam1104I CTCTTC 1 cut(s) 1342
EarI CTCTTC 1 cut(s) 1342
Ecl136II GAGCTC 1 cut(s) 440
Eco24I GRGCYC 1 cut(s) 442
Eco31I GGTCTC 1 cut(s) 593
Eco47I GGWCC 3 cut(s) 4, 686, 1703
Eco53kI GAGCTC 1 cut(s) 440
Eco72I CACGTG 1 cut(s) 1174
Eco81I CCTNAGG 1 cut(s) 1695
Eco88I CYCGRG 3 cut(s) 53, 566, 1204
EcoICRI GAGCTC 1 cut(s) 440
EcoO109I RGGNCCY 1 cut(s) 686
EcoRII CCWGG 3 cut(s) 334, 1082, 1360
EcoT38I GRGCYC 1 cut(s) 442
FalI AAGNNNNNCTT 2 cut(s) 1321, 1353
FaqI GGGAC 1 cut(s) 1649
FbaI TGATCA 1 cut(s) 403
FblI GTMKAC 1 cut(s) 1002
Fnu4HI GCNGC 8 cut(s) 81, 159, 387, 467, 618, 828, 885, 1149
FokI GGATG 1 cut(s) 819
FriOI GRGCYC 1 cut(s) 442
Fsp4HI GCNGC 8 cut(s) 81, 159, 387, 467, 618, 828, 885, 1149
FspBI CTAG 6 cut(s) 435, 755, 950, 1230, 1310, 1893
FspI TGCGCA 1 cut(s) 262
GlaI GCGC 2 cut(s) 262, 521
GluI GCNGC 8 cut(s) 81, 159, 387, 467, 618, 828, 885, 1149
HaeIII GGCC 6 cut(s) 158, 386, 503, 840, 920, 1860
HapII CCGG 2 cut(s) 274, 1861
HgaI GACGC 1 cut(s) 1997
HhaI GCGC 2 cut(s) 263, 522
Hin1I GRCGYC 1 cut(s) 278
Hin6I GCGC 2 cut(s) 261, 520
HinP1I GCGC 2 cut(s) 261, 520
HincII GTYRAC 2 cut(s) 1003, 1887
HindII GTYRAC 2 cut(s) 1003, 1887
HindIII AAGCTT 1 cut(s) 453
HpaII CCGG 2 cut(s) 274, 1861
HphI GGTGA 4 cut(s) 50, 377, 521, 730
Hpy166II GTNNAC 6 cut(s) 1003, 1348, 1378, 1544, 1834, 1887
Hpy188I TCNGA 9 cut(s) 25, 649, 1074, 1192, 1510, 1561, 1593, 1623, 2072
Hpy8I GTNNAC 6 cut(s) 1003, 1348, 1378, 1544, 1834, 1887
Hpy99I CGWCG 2 cut(s) 1385, 1991
HpyCH4IV ACGT 2 cut(s) 278, 1173
HpyF10VI GCNNNNNNNGC 7 cut(s) 80, 86, 132, 155, 590, 710, 1813
HpyF3I CTNAG 5 cut(s) 866, 1088, 1680, 1695, 1749
HpySE526I ACGT 2 cut(s) 278, 1173
Hsp92I GRCGYC 1 cut(s) 278
HspAI GCGC 2 cut(s) 261, 520
KpnI GGTACC 1 cut(s) 1964
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
Lsp1109I GCAGC 5 cut(s) 92, 453, 604, 814, 1135
LweI GCATC 8 cut(s) 211, 309, 580, 1021, 1216, 1477, 1564, 1743
MabI ACCWGGT 1 cut(s) 1360
MaeI CTAG 6 cut(s) 435, 755, 950, 1230, 1310, 1893
MaeII ACGT 2 cut(s) 278, 1173
MaeIII GTNAC 9 cut(s) 189, 310, 365, 896, 1169, 1483, 1567, 1723, 1824
MalI GATC 8 cut(s) 69, 141, 405, 722, 732, 738, 1412, 1616
MboI GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
MboII GAAGA 8 cut(s) 12, 134, 925, 1016, 1327, 1329, 1624, 1655
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 3 cut(s) 139, 736, 1410
MhlI GDGCHC 2 cut(s) 442, 2050
MlyI GAGTC 5 cut(s) 214, 805, 1186, 1196, 1563
MmeI TCCRAC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 1763
MseI TTAA 4 cut(s) 128, 848, 1103, 1457
MslI CAYNNNNRTG 4 cut(s) 399, 539, 951, 1017
MspA1I CMGCKG 1 cut(s) 466
MspI CCGG 2 cut(s) 274, 1861
MspR9I CCNGG 3 cut(s) 336, 1084, 1362
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 2 cut(s) 128, 1247
MvaI CCWGG 3 cut(s) 336, 1084, 1362
MvnI CGCG 3 cut(s) 389, 1306, 1991
MwoI GCNNNNNNNGC 7 cut(s) 80, 86, 132, 155, 590, 710, 1813
NdeII GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
NlaIV GGNNCC 1 cut(s) 1962
NmuCI GTSAC 4 cut(s) 365, 896, 1169, 1723
NruI TCGCGA 1 cut(s) 1306
NsbI TGCGCA 1 cut(s) 262
NspI RCATGY 4 cut(s) 261, 331, 383, 1832
NspV TTCGAA 1 cut(s) 1340
OliI CACNNNNGTG 1 cut(s) 539
PaeI GCATGC 1 cut(s) 261
PaeR7I CTCGAG 2 cut(s) 53, 1204
PagI TCATGA 2 cut(s) 487, 741
PciI ACATGT 3 cut(s) 327, 379, 1828
PctI GAATGC 2 cut(s) 128, 1247
PdmI GAANNNNTTC 1 cut(s) 1763
PfeI GAWTC 5 cut(s) 92, 318, 878, 1282, 1511
PflFI GACNNNGTC 1 cut(s) 1640
PflMI CCANNNNNTGG 1 cut(s) 2090
PfoI TCCNGGA 1 cut(s) 334
PkrI GCNGC 8 cut(s) 82, 160, 388, 468, 619, 829, 886, 1150
PleI GAGTC 5 cut(s) 214, 805, 1185, 1196, 1562
PmaCI CACGTG 1 cut(s) 1174
PmlI CACGTG 1 cut(s) 1174
PpsI GAGTC 5 cut(s) 214, 805, 1185, 1196, 1562
Ppu21I YACGTR 1 cut(s) 1174
PpuMI RGGWCCY 1 cut(s) 686
PscI ACATGT 3 cut(s) 327, 379, 1828
PshAI GACNNNNGTC 1 cut(s) 330
PsiI TTATAA 1 cut(s) 633
Psp124BI GAGCTC 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 686
Psp6I CCWGG 3 cut(s) 334, 1082, 1360
PspCI CACGTG 1 cut(s) 1174
PspGI CCWGG 3 cut(s) 334, 1082, 1360
PspN4I GGNNCC 1 cut(s) 1962
PspPI GGNCC 5 cut(s) 4, 156, 686, 919, 1703
PspPPI RGGWCCY 1 cut(s) 686
PspXI VCTCGAGB 1 cut(s) 1204
PsuI RGATCY 3 cut(s) 139, 736, 1410
PsyI GACNNNGTC 1 cut(s) 1640
PvuII CAGCTG 1 cut(s) 466
RruI TCGCGA 1 cut(s) 1306
RsaI GTAC 2 cut(s) 578, 1962
RsaNI GTAC 2 cut(s) 577, 1961
RseI CAYNNNNRTG 4 cut(s) 399, 539, 951, 1017
SacI GAGCTC 1 cut(s) 442
SalI GTCGAC 1 cut(s) 1001
SaqAI TTAA 4 cut(s) 128, 848, 1103, 1457
SatI GCNGC 8 cut(s) 81, 159, 387, 467, 618, 828, 885, 1149
Sau3AI GATC 8 cut(s) 67, 139, 403, 720, 730, 736, 1410, 1614
Sau96I GGNCC 5 cut(s) 4, 156, 686, 919, 1703
SchI GAGTC 5 cut(s) 214, 805, 1186, 1196, 1563
ScrFI CCNGG 3 cut(s) 336, 1084, 1362
SduI GDGCHC 2 cut(s) 442, 2050
SexAI ACCWGGT 1 cut(s) 1360
SfaNI GCATC 8 cut(s) 211, 309, 580, 1021, 1216, 1477, 1564, 1743
SfcI CTRYAG 1 cut(s) 1672
Sfr274I CTCGAG 2 cut(s) 53, 1204
SfuI TTCGAA 1 cut(s) 1340
SinI GGWCC 3 cut(s) 4, 686, 1703
SlaI CTCGAG 2 cut(s) 53, 1204
SmiMI CAYNNNNRTG 4 cut(s) 399, 539, 951, 1017
SmlI CTYRAG 4 cut(s) 53, 656, 1204, 1717
SmoI CTYRAG 4 cut(s) 53, 656, 1204, 1717
SphI GCATGC 1 cut(s) 261
SsiI CCGC 4 cut(s) 159, 387, 884, 1991
SspI AATATT 3 cut(s) 175, 216, 1731
SspMI CTAG 6 cut(s) 435, 755, 950, 1230, 1310, 1893
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 3 cut(s) 334, 1082, 1360
TaiI ACGT 2 cut(s) 281, 1176
TaqI TCGA 7 cut(s) 54, 284, 324, 1002, 1205, 1340, 1986
TaqII GACCGA 1 cut(s) 1607
TatI WGTACW 1 cut(s) 576
TauI GCSGC 3 cut(s) 161, 389, 887
TfiI GAWTC 5 cut(s) 92, 318, 878, 1282, 1511
Tru1I TTAA 4 cut(s) 128, 848, 1103, 1457
Tru9I TTAA 4 cut(s) 128, 848, 1103, 1457
TscAI CASTG 7 cut(s) 522, 541, 772, 1357, 1378, 1681, 1887
TseFI GTSAC 4 cut(s) 365, 896, 1169, 1723
TseI GCWGC 5 cut(s) 80, 466, 617, 827, 1148
Tsp45I GTSAC 4 cut(s) 365, 896, 1169, 1723
TspDTI ATGAA 7 cut(s) 135, 696, 891, 974, 1127, 1207, 1833
TspGWI ACGGA 3 cut(s) 210, 507, 1157
TspRI CASTG 7 cut(s) 522, 541, 772, 1357, 1378, 1681, 1887
Tth111I GACNNNGTC 1 cut(s) 1640
Van91I CCANNNNNTGG 1 cut(s) 2090
VpaK11BI GGWCC 3 cut(s) 4, 686, 1703
XapI RAATTY 2 cut(s) 1163, 1600
XbaI TCTAGA 1 cut(s) 949
XceI RCATGY 4 cut(s) 261, 331, 383, 1832
XhoI CTCGAG 2 cut(s) 53, 1204
XmiI GTMKAC 1 cut(s) 1002
XmnI GAANNNNTTC 1 cut(s) 1763
XspI CTAG 6 cut(s) 435, 755, 950, 1230, 1310, 1893
ZraI GACGTC 1 cut(s) 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.