Rh2DG116000

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000489
Physical Location & Seq
Reverse (-)
9562190 .. 9565684
3495 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG116000.1

Sequence Viewer

Length: 1467 bp
ATGGACCAACCTTCCACTTCTTCTGACAATGAGAGTGGTGAAGCAACACAGCTCGAGATTGAGAAGGATCGGGCAATAGCAGCTAAAGCCGAATCCAGCCAAGAAGTTGAAGCACAAGATGAATGCTTAACTGGCATGGATCTTCCAGCATACAGGGCCGCAACAACAGGCAATATTGATTTCCTTGTGTTACACGGAGAGCATCTATCCCAAATATTGACTCCAACAAAGAACACAGTTCTCCATATTTATATTGCATGCGCAAAGAGAAGCCGGACGTCATCGAAAAACACAGCCAGCATCAATACGGTTACAAGAATCCTCGACATGTGTCCAGGACTGCTATTGCAAGCCAACGAGAGAGGTGACACAACCTTACATGTGGCCGCGAAACACGGGCATGATCACATAGTTGAACATCTTATCAAGTTGGCTAGAGCTCGTCAGGAGGAAGCTTGTTGCCAGCTGCTCATCAGGACAGTCAATCATGATGGAGACACGGCCTTGCACGAAGCAGTGCGCTTCAATCACCTCACTGTGGTGGAGATATTGACCAGAGCAGACCCTGAGGCTTTGTACTCTGCTAATGATGCAGGAGAGACCCCACTCTACATGGCTGCTCAAAGAGGTTATAATTCTTTGGTTTCTGAAATACTTGAGACTTGCACAAATCCAAGTTATGAAGGTCCTGATGGTAGAACTGCATTGCACGCTTCGAAAGACCCCTGGCTTAGCAATGTTCTCTTAAATGGCAAAGATGATAACCAAAATACACCTTTTCATCAACTTGCTGCTTCTTTCTACAAATTCGGTCACGTGAGTCGGGCTGGTTCTGAAATTATTGACTCGAGCAAGGATTTCATAAGTGATGCTAGAGTTGATAAGATGGCATTCAATAAGGAACACCTGACTGCTTTGGATATGATTCAAGCTAACCATAGTTTTTCGCGACTAGAGAAGAAATATGTGCAAAGACTCTCTTCGAAAGTGAACAGTGGCAGACCAGGTTATCACACTGTAAACGACGAAATCAAAGGAAATAAAGACAAAGAAATCAAAATTGAGAGGAAGGAAGCAACTAATCAAATAGTGAAGGAATTAAAACAATCGCATCTCATAGCAGCTACACTCATAGCAACTGTAACCTTCACAGCAGGTATGACCATGCCAGGCGGTTATCAAAGTCAAAAAGGACGGGACCAGGGTTTCGCAGTTCTAACCAAAAATGCCAATTTCCGAGTATTCATTTTGACAAATTTAATTGCCATGACTTTATCCAGTTTGGCTGTCTTCATCCACATTTTGGTCCTTCTCACAGCTAAGCAAATGTGGTGGATCACGACTCTTCGACTCAATAGGTCGAAGGAGAAACCAGAGAAAGAAGATTCTAAGAATGATGGGAAGATTGAGACAACTTTGATAATTGAATACCTGCAGACATACAGATTAAGAATGACTCATCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

488

Amino Acids

54.43

Weight (kDa)

6.61

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 117 - 188 1.5e-10 Ankyrin repeats (3 copies)
PGG PF13962 364 - 443 2.1e-22 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 633
AatII GACGTC 1 cut(s) 281
Acc16I TGCGCA 1 cut(s) 262
Acc36I ACCTGC 2 cut(s) 1145, 1440
AccB7I CCANNNNNTGG 1 cut(s) 1303
AccII CGCG 2 cut(s) 389, 949
AciI CCGC 3 cut(s) 159, 387, 1173
AclWI GGATC 3 cut(s) 75, 147, 1343
AcoI YGGCCR 1 cut(s) 384
AcsI RAATTY 2 cut(s) 806, 1255
AcvI CACGTG 1 cut(s) 817
AcyI GRCGYC 1 cut(s) 278
AfaI GTAC 1 cut(s) 578
AfiI CCNNNNNNNGG 2 cut(s) 538, 1303
AflIII ACRYGT 2 cut(s) 327, 379
AgsI TTSAA 6 cut(s) 110, 416, 526, 895, 929, 1427
AjnI CCWGG 5 cut(s) 334, 725, 1003, 1168, 1200
AleI CACNNNNGTG 1 cut(s) 539
AluBI AGCT 8 cut(s) 52, 83, 440, 455, 466, 932, 1124, 1319
AluI AGCT 8 cut(s) 52, 83, 440, 455, 466, 932, 1124, 1319
Alw21I GWGCWC 1 cut(s) 442
Alw26I GTCTC 4 cut(s) 489, 593, 653, 1403
AlwI GGATC 3 cut(s) 75, 147, 1343
AlwNI CAGNNNCTG 1 cut(s) 566
Ama87I CYCGRG 2 cut(s) 53, 847
AoxI GGCC 3 cut(s) 156, 384, 501
ApeKI GCWGC 5 cut(s) 80, 466, 617, 791, 1121
ApoI RAATTY 2 cut(s) 806, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 1190, 1222
AspLEI GCGC 2 cut(s) 263, 522
AspS9I GGNCC 5 cut(s) 4, 156, 686, 1198, 1306
AsuHPI GGTGA 3 cut(s) 50, 377, 521
AsuII TTCGAA 2 cut(s) 716, 983
AvaI CYCGRG 2 cut(s) 53, 847
AvaII GGWCC 4 cut(s) 4, 686, 1198, 1306
AxyI CCTNAGG 1 cut(s) 567
BanII GRGCYC 1 cut(s) 442
BbrPI CACGTG 1 cut(s) 817
BbsI GAAGAC 1 cut(s) 1282
Bbv12I GWGCWC 1 cut(s) 442
BbvI GCAGC 5 cut(s) 92, 453, 604, 778, 1133
BccI CCATC 4 cut(s) 485, 686, 880, 1391
BceAI ACGGC 1 cut(s) 516
BciT130I CCWGG 5 cut(s) 336, 727, 1005, 1170, 1202
BclI TGATCA 1 cut(s) 403
BcoDI GTCTC 4 cut(s) 489, 593, 653, 1403
BfaI CTAG 4 cut(s) 435, 873, 953, 1465
BfmI CTRYAG 1 cut(s) 1433
BfuAI ACCTGC 2 cut(s) 1145, 1440
BisI GCNGC 7 cut(s) 81, 159, 387, 467, 618, 792, 1122
BlpI GCTNAGC 2 cut(s) 731, 1320
BlsI GCNGC 7 cut(s) 82, 160, 388, 468, 619, 793, 1123
Bme1390I CCNGG 5 cut(s) 336, 727, 1005, 1170, 1202
Bme18I GGWCC 4 cut(s) 4, 686, 1198, 1306
BmeT110I CYCGRG 2 cut(s) 53, 847
BmgT120I GGNCC 5 cut(s) 4, 156, 686, 1198, 1306
BmiI GGNNCC 1 cut(s) 1199
BmrFI CCNGG 5 cut(s) 336, 727, 1005, 1170, 1202
BmsI GCATC 5 cut(s) 211, 309, 580, 859, 1120
BoxI GACNNNNGTC 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 1282
Bpu1102I GCTNAGC 2 cut(s) 731, 1320
Bpu14I TTCGAA 2 cut(s) 716, 983
BpuEI CTTGAG 1 cut(s) 677
BsaAI YACGTR 1 cut(s) 817
BsaHI GRCGYC 1 cut(s) 278
BsaI GGTCTC 1 cut(s) 593
BsaJI CCNNGG 2 cut(s) 725, 1201
Bsc4I CCNNNNNNNGG 2 cut(s) 538, 1303
Bse1I ACTGG 2 cut(s) 136, 1278
Bse21I CCTNAGG 1 cut(s) 567
Bse3DI GCAATG 2 cut(s) 704, 742
BseBI CCWGG 5 cut(s) 336, 727, 1005, 1170, 1202
BseDI CCNNGG 2 cut(s) 725, 1201
BseGI GGATG 1 cut(s) 1293
BseLI CCNNNNNNNGG 2 cut(s) 538, 1303
BseMI GCAATG 2 cut(s) 704, 742
BseMII CTCAG 1 cut(s) 558
BseNI ACTGG 2 cut(s) 136, 1278
BseXI GCAGC 5 cut(s) 92, 453, 604, 778, 1133
Bsh1236I CGCG 2 cut(s) 389, 949
BshFI GGCC 3 cut(s) 158, 386, 503
BsiHKAI GWGCWC 1 cut(s) 442
BsiHKCI CYCGRG 2 cut(s) 53, 847
BsiSI CCGG 1 cut(s) 274
BslFI GGGAC 1 cut(s) 1211
BslI CCNNNNNNNGG 2 cut(s) 538, 1303
BsmAI GTCTC 4 cut(s) 489, 593, 653, 1403
BsmFI GGGAC 1 cut(s) 1211
BsmI GAATGC 2 cut(s) 128, 890
BsnI GGCC 3 cut(s) 158, 386, 503
Bso31I GGTCTC 1 cut(s) 593
BsoBI CYCGRG 2 cut(s) 53, 847
Bsp119I TTCGAA 2 cut(s) 716, 983
Bsp1286I GDGCHC 1 cut(s) 442
Bsp143I GATC 4 cut(s) 67, 139, 403, 1335
Bsp1720I GCTNAGC 2 cut(s) 731, 1320
Bsp68I TCGCGA 1 cut(s) 949
BspACI CCGC 3 cut(s) 159, 387, 1173
BspANI GGCC 3 cut(s) 158, 386, 503
BspCNI CTCAG 1 cut(s) 559
BspFNI CGCG 2 cut(s) 389, 949
BspHI TCATGA 1 cut(s) 487
BspLI GGNNCC 1 cut(s) 1199
BspMAI CTGCAG 1 cut(s) 1437
BspMI ACCTGC 2 cut(s) 1145, 1440
BspPI GGATC 3 cut(s) 75, 147, 1343
BspT104I TTCGAA 2 cut(s) 716, 983
BspTNI GGTCTC 1 cut(s) 593
BsrDI GCAATG 2 cut(s) 704, 742
BsrI ACTGG 2 cut(s) 136, 1278
BssECI CCNNGG 2 cut(s) 725, 1201
BssMI GATC 4 cut(s) 67, 139, 403, 1335
BssNI GRCGYC 1 cut(s) 278
Bst2UI CCWGG 5 cut(s) 336, 727, 1005, 1170, 1202
Bst4CI ACNGT 7 cut(s) 238, 310, 481, 538, 995, 1018, 1141
Bst6I CTCTTC 2 cut(s) 985, 1350
BstACI GRCGYC 1 cut(s) 278
BstBAI YACGTR 1 cut(s) 817
BstBI TTCGAA 2 cut(s) 716, 983
BstC8I GCNNGC 5 cut(s) 259, 298, 351, 464, 711
BstDEI CTNAG 4 cut(s) 567, 731, 1320, 1389
BstF5I GGATG 1 cut(s) 1293
BstFNI CGCG 2 cut(s) 389, 949
BstHHI GCGC 2 cut(s) 263, 522
BstKTI GATC 4 cut(s) 70, 142, 406, 1338
BstMAI GTCTC 4 cut(s) 489, 593, 653, 1403
BstMBI GATC 4 cut(s) 67, 139, 403, 1335
BstMWI GCNNNNNNNGC 6 cut(s) 80, 86, 132, 155, 590, 710
BstNI CCWGG 5 cut(s) 336, 727, 1005, 1170, 1202
BstNSI RCATGY 3 cut(s) 261, 331, 383
BstPAI GACNNNNGTC 1 cut(s) 330
BstSCI CCNGG 5 cut(s) 334, 725, 1003, 1168, 1200
BstSFI CTRYAG 1 cut(s) 1433
BstUI CGCG 2 cut(s) 389, 949
BstV1I GCAGC 5 cut(s) 92, 453, 604, 778, 1133
BstV2I GAAGAC 1 cut(s) 1282
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
Bsu36I CCTNAGG 1 cut(s) 567
BsuRI GGCC 3 cut(s) 158, 386, 503
BtsCI GGATG 1 cut(s) 1293
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 4 cut(s) 522, 534, 1000, 1014
BtuMI TCGCGA 1 cut(s) 949
BveI ACCTGC 2 cut(s) 1145, 1440
Cac8I GCNNGC 5 cut(s) 259, 298, 351, 464, 711
CaiI CAGNNNCTG 1 cut(s) 566
CciI TCATGA 1 cut(s) 487
CfoI GCGC 2 cut(s) 263, 522
Cfr13I GGNCC 5 cut(s) 4, 156, 686, 1198, 1306
CsiI ACCWGGT 1 cut(s) 1003
Csp6I GTAC 1 cut(s) 577
CspCI CAANNNNNGTGG 4 cut(s) 16, 51, 1313, 1348
CviAII CATG 9 cut(s) 136, 258, 328, 380, 401, 488, 613, 1165, 1267
CviQI GTAC 1 cut(s) 577
DdeI CTNAG 4 cut(s) 567, 731, 1320, 1389
DpnI GATC 4 cut(s) 69, 141, 405, 1337
DpnII GATC 4 cut(s) 67, 139, 403, 1335
EaeI YGGCCR 1 cut(s) 384
Eam1104I CTCTTC 2 cut(s) 985, 1350
EarI CTCTTC 2 cut(s) 985, 1350
Ecl136II GAGCTC 1 cut(s) 440
Eco24I GRGCYC 1 cut(s) 442
Eco31I GGTCTC 1 cut(s) 593
Eco47I GGWCC 4 cut(s) 4, 686, 1198, 1306
Eco53kI GAGCTC 1 cut(s) 440
Eco72I CACGTG 1 cut(s) 817
Eco81I CCTNAGG 1 cut(s) 567
Eco88I CYCGRG 2 cut(s) 53, 847
EcoICRI GAGCTC 1 cut(s) 440
EcoO109I RGGNCCY 1 cut(s) 686
EcoRII CCWGG 5 cut(s) 334, 725, 1003, 1168, 1200
EcoT38I GRGCYC 1 cut(s) 442
FaeI CATG 9 cut(s) 139, 261, 331, 383, 404, 491, 616, 1168, 1270
FalI AAGNNNNNCTT 2 cut(s) 964, 996
FaqI GGGAC 1 cut(s) 1211
FatI CATG 9 cut(s) 135, 257, 327, 379, 400, 487, 612, 1164, 1266
FbaI TGATCA 1 cut(s) 403
Fnu4HI GCNGC 7 cut(s) 81, 159, 387, 467, 618, 792, 1122
FokI GGATG 1 cut(s) 1280
FriOI GRGCYC 1 cut(s) 442
Fsp4HI GCNGC 7 cut(s) 81, 159, 387, 467, 618, 792, 1122
FspBI CTAG 4 cut(s) 435, 873, 953, 1465
FspI TGCGCA 1 cut(s) 262
GlaI GCGC 2 cut(s) 262, 521
GluI GCNGC 7 cut(s) 81, 159, 387, 467, 618, 792, 1122
HaeIII GGCC 3 cut(s) 158, 386, 503
HapII CCGG 1 cut(s) 274
HhaI GCGC 2 cut(s) 263, 522
Hin1I GRCGYC 1 cut(s) 278
Hin1II CATG 9 cut(s) 139, 261, 331, 383, 404, 491, 616, 1168, 1270
Hin6I GCGC 2 cut(s) 261, 520
HinP1I GCGC 2 cut(s) 261, 520
HindIII AAGCTT 1 cut(s) 453
HpaII CCGG 1 cut(s) 274
HphI GGTGA 3 cut(s) 50, 377, 521
Hpy166II GTNNAC 2 cut(s) 991, 1021
Hpy188I TCNGA 4 cut(s) 25, 649, 835, 1238
Hpy188III TCNNGA 7 cut(s) 55, 446, 475, 488, 689, 948, 1339
Hpy8I GTNNAC 2 cut(s) 991, 1021
Hpy99I CGWCG 1 cut(s) 1028
HpyAV CCTTC 8 cut(s) 21, 58, 677, 1063, 1087, 1156, 1319, 1357
HpyCH4III ACNGT 7 cut(s) 238, 310, 481, 538, 995, 1018, 1141
HpyCH4IV ACGT 2 cut(s) 278, 816
HpyCH4V TGCA 9 cut(s) 257, 349, 508, 593, 666, 704, 709, 970, 1435
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 86, 132, 155, 590, 710
HpyF3I CTNAG 4 cut(s) 567, 731, 1320, 1389
HpySE526I ACGT 2 cut(s) 278, 816
Hsp92I GRCGYC 1 cut(s) 278
Hsp92II CATG 9 cut(s) 139, 261, 331, 383, 404, 491, 616, 1168, 1270
HspAI GCGC 2 cut(s) 261, 520
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 4 cut(s) 67, 139, 403, 1335
Lsp1109I GCAGC 5 cut(s) 92, 453, 604, 778, 1133
LweI GCATC 5 cut(s) 211, 309, 580, 859, 1120
MabI ACCWGGT 1 cut(s) 1003
MaeI CTAG 4 cut(s) 435, 873, 953, 1465
MaeII ACGT 2 cut(s) 278, 816
MaeIII GTNAC 5 cut(s) 189, 310, 365, 812, 1141
MalI GATC 4 cut(s) 69, 141, 405, 1337
MboI GATC 4 cut(s) 67, 139, 403, 1335
MboII GAAGA 8 cut(s) 12, 134, 970, 972, 1282, 1337, 1394, 1414
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 442
MluCI AATT 9 cut(s) 634, 806, 837, 1059, 1097, 1231, 1255, 1260, 1422
MlyI GAGTC 7 cut(s) 214, 829, 839, 969, 1336, 1344, 1450
MmeI TCCRAC 1 cut(s) 248
MnlI CCTC 7 cut(s) 332, 356, 442, 542, 562, 620, 1059
MseI TTAA 5 cut(s) 128, 746, 1100, 1259, 1448
MslI CAYNNNNRTG 2 cut(s) 399, 539
MspA1I CMGCKG 1 cut(s) 466
MspI CCGG 1 cut(s) 274
MspR9I CCNGG 5 cut(s) 336, 727, 1005, 1170, 1202
Mva1269I GAATGC 2 cut(s) 128, 890
MvaI CCWGG 5 cut(s) 336, 727, 1005, 1170, 1202
MvnI CGCG 2 cut(s) 389, 949
MwoI GCNNNNNNNGC 6 cut(s) 80, 86, 132, 155, 590, 710
NdeII GATC 4 cut(s) 67, 139, 403, 1335
NlaIII CATG 9 cut(s) 139, 261, 331, 383, 404, 491, 616, 1168, 1270
NlaIV GGNNCC 1 cut(s) 1199
NmuCI GTSAC 2 cut(s) 365, 812
NruI TCGCGA 1 cut(s) 949
NsbI TGCGCA 1 cut(s) 262
NspI RCATGY 3 cut(s) 261, 331, 383
NspV TTCGAA 2 cut(s) 716, 983
OliI CACNNNNGTG 1 cut(s) 539
PaeI GCATGC 1 cut(s) 261
PaeR7I CTCGAG 2 cut(s) 53, 847
PagI TCATGA 1 cut(s) 487
PciI ACATGT 2 cut(s) 327, 379
PctI GAATGC 2 cut(s) 128, 890
PfeI GAWTC 4 cut(s) 92, 318, 925, 1385
PflMI CCANNNNNTGG 1 cut(s) 1303
PfoI TCCNGGA 1 cut(s) 334
PkrI GCNGC 7 cut(s) 82, 160, 388, 468, 619, 793, 1123
PleI GAGTC 7 cut(s) 214, 828, 839, 969, 1336, 1344, 1450
PmaCI CACGTG 1 cut(s) 817
PmlI CACGTG 1 cut(s) 817
PpsI GAGTC 7 cut(s) 214, 828, 839, 969, 1336, 1344, 1450
Ppu21I YACGTR 1 cut(s) 817
PpuMI RGGWCCY 1 cut(s) 686
PscI ACATGT 2 cut(s) 327, 379
PshAI GACNNNNGTC 1 cut(s) 330
PsiI TTATAA 1 cut(s) 633
Psp124BI GAGCTC 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 686
Psp6I CCWGG 5 cut(s) 334, 725, 1003, 1168, 1200
PspCI CACGTG 1 cut(s) 817
PspGI CCWGG 5 cut(s) 334, 725, 1003, 1168, 1200
PspN4I GGNNCC 1 cut(s) 1199
PspPI GGNCC 5 cut(s) 4, 156, 686, 1198, 1306
PspPPI RGGWCCY 1 cut(s) 686
PspXI VCTCGAGB 1 cut(s) 847
PstI CTGCAG 1 cut(s) 1437
PstNI CAGNNNCTG 1 cut(s) 566
PsuI RGATCY 1 cut(s) 139
PvuII CAGCTG 1 cut(s) 466
RruI TCGCGA 1 cut(s) 949
RsaI GTAC 1 cut(s) 578
RsaNI GTAC 1 cut(s) 577
RseI CAYNNNNRTG 2 cut(s) 399, 539
SacI GAGCTC 1 cut(s) 442
SaqAI TTAA 5 cut(s) 128, 746, 1100, 1259, 1448
SatI GCNGC 7 cut(s) 81, 159, 387, 467, 618, 792, 1122
Sau3AI GATC 4 cut(s) 67, 139, 403, 1335
Sau96I GGNCC 5 cut(s) 4, 156, 686, 1198, 1306
SchI GAGTC 7 cut(s) 214, 829, 839, 969, 1336, 1344, 1450
ScrFI CCNGG 5 cut(s) 336, 727, 1005, 1170, 1202
SduI GDGCHC 1 cut(s) 442
SexAI ACCWGGT 1 cut(s) 1003
SfaNI GCATC 5 cut(s) 211, 309, 580, 859, 1120
SfcI CTRYAG 1 cut(s) 1433
Sfr274I CTCGAG 2 cut(s) 53, 847
SfuI TTCGAA 2 cut(s) 716, 983
SinI GGWCC 4 cut(s) 4, 686, 1198, 1306
SlaI CTCGAG 2 cut(s) 53, 847
SmiMI CAYNNNNRTG 2 cut(s) 399, 539
SmlI CTYRAG 3 cut(s) 53, 656, 847
SmoI CTYRAG 3 cut(s) 53, 656, 847
SphI GCATGC 1 cut(s) 261
Sse9I AATT 9 cut(s) 634, 806, 837, 1059, 1097, 1231, 1255, 1260, 1422
SsiI CCGC 3 cut(s) 159, 387, 1173
SspI AATATT 2 cut(s) 175, 216
SspMI CTAG 4 cut(s) 435, 873, 953, 1465
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 5 cut(s) 334, 725, 1003, 1168, 1200
TaaI ACNGT 7 cut(s) 238, 310, 481, 538, 995, 1018, 1141
TaiI ACGT 2 cut(s) 281, 819
TaqI TCGA 8 cut(s) 54, 284, 324, 716, 848, 983, 1348, 1361
TaqII GACCGA 1 cut(s) 800
TasI AATT 9 cut(s) 634, 806, 837, 1059, 1097, 1231, 1255, 1260, 1422
TatI WGTACW 1 cut(s) 576
TauI GCSGC 2 cut(s) 161, 389
TfiI GAWTC 4 cut(s) 92, 318, 925, 1385
Tru1I TTAA 5 cut(s) 128, 746, 1100, 1259, 1448
Tru9I TTAA 5 cut(s) 128, 746, 1100, 1259, 1448
TscAI CASTG 4 cut(s) 522, 541, 1000, 1021
TseFI GTSAC 2 cut(s) 365, 812
TseI GCWGC 5 cut(s) 80, 466, 617, 791, 1121
Tsp45I GTSAC 2 cut(s) 365, 812
TspDTI ATGAA 6 cut(s) 135, 696, 770, 850, 1234, 1282
TspGWI ACGGA 1 cut(s) 210
TspRI CASTG 4 cut(s) 522, 541, 1000, 1021
Van91I CCANNNNNTGG 1 cut(s) 1303
VpaK11BI GGWCC 4 cut(s) 4, 686, 1198, 1306
XapI RAATTY 2 cut(s) 806, 1255
XceI RCATGY 3 cut(s) 261, 331, 383
XhoI CTCGAG 2 cut(s) 53, 847
XspI CTAG 4 cut(s) 435, 873, 953, 1465
ZraI GACGTC 1 cut(s) 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.