FvH4_1g12870

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000489
Physical Location & Seq
Forward (+)
7112098 .. 7115970
3873 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12870.t1

Sequence Viewer

Length: 2016 bp
ATGGCGTCCAATTCATGTGAGGCTAGGCTAGAAGAGGCCATCCCGGAAGCTACCGGAGGCGATGAATGTTTGGAAGGCATGGAGCTTGCTGTATACTATGCCGCAAAACAAGGCGACATTGATGCCCTTTCAGAACAAAAATATAAGGAGCGTCTTCACGAAATATTGACTCCAACTGGAAACACAATCCTCCATATCTACATAGCATGTGCAACGTCAACCGATCGCAAAGAAGTGAGCAATTCAGCCATCGTCGTCGAGAAGATTCTTGATATGTGTCCACTACTACTGCTGCAGTCCAACAAGATCGGTGACACTGCATTACACATTGCGGCAAGATACGGACGCACTGCTATAGTTGAAATGATTTTGCAGATTGGCAAAAAGAATCGTGACGAAGGAGGAGGAGCTTGGCCGAGAATCATCAGCGAAACAAATAAGGAGGGAAATACAGCCTTGCACGAGGCCGTGCGGTTTAATCACTTTGATGTGGTGACGAAGTTGACCACACAAGATGTTCATGAGCAGATTTTCTACTCGGCTAATGTCGCCGGAGAGACTCCTCTATACATGGCTGCCGAAAGGGGATATCGTGATTTGGTTTTTCAAATCCTACACAGTTGCACAGATCCAGCTTACCAAGGCCCCAATGGTAGAACTGCTCTGCATGCTGCAGTCATACGCAACGATCAAGAGATGACGGAGAAGTTACTAGAACGTACAAGGGGTCTAACAAAAGCAGTAGATGAACAAGGATGCACTCCGCTTCACCTTGCTGCGTACTCGGGTCACACTTCAATTGTGGAACTGTTACTCAAACATGACAGATCTGCTGCCTACGTTAAGGAGAAAGATGAGAACAGAACAGCCCTTCACTTTGCAGCGTCCAAAGGACATGGAGATGTAATAGCACAGCTAATATACCATTGTCCTGATTGTTGCGAATTGGTGGACAAGAAATCTCGCAATTTCCTACACTGCGGTATCCTCGCCGATAAAGAAATCAGTGTAGTGGATTTCGTGCTAGACGATCCATGGCTTAGCAACATCCTCCTAAATGGCAAGGACGACAATGGAGACACACCCCTCCACTACTTTGCTGATACTAATCACCTCCGTCTTTCTGGTGGCGCTTTAGCAACAGATGCTAGAGTTGATAAGACGGCATTCAACAAAGCAAATCAAAACGCTTTTGATATCCTTTTTCAAAATAAAGGAGACTCTTATTTCTCAACAACACAGGGCCAACTGAAAGACAAATTAAAAAGGAATGGTGTCATACCAGGCTGTCGAAATGTAAGGGACAAAGAGGAGGTACCGGTTGAGAATAAAGAAAAGGAAAAATCAAGTGAAGAAGAATACAGTAAAATCAAGGATTCCAATCTTCTAGTGGCTACACTTATTGCAACTGTAAGTTTCGCAGCAGGTTTTACGATGCCTGGTGGTTACCAAAGTGATAAAGGATCAGACCAAGGTTTTGCAATTCTAGCCCGAAGTGCAGCTTTCCAAGCTTTTGTTATAACAAATACCATAGCCATGACCTTATCTAGTTGCTCTGTCATACTGCATCTTTATTCGATTGGGTTTTTAAAGCGGAAAGTGTTTTCTGAGGCGTATATTTTTCTATACGCGTTCACCATGTTGGCTTTGATTGCAATGGTGATTGCGTTTATCACGGGCACATATGCAGTGTTGGGTCGTTCTTCATGGCTTGGCATTACGGTTTGTGTTCTTGGCTTCCTTCTATTCTTTGTTTTAGCTGAATTATTGATTAATGATGAAAGAGCAATAATGGAGGACCCTATACGATTGTTGCCTTTGAGTCTTTCATCAGTATTCTTCTTTTGGCTGGGGATGAAGATGTTTTATGGTATCCGCAAATTATATTACAAATGTCTCTGGCTGGTCTCCCCTGCATCAAAAGGAAAGCGGTCAAAGCTCATGGTTGCTACCCGTAGTACTTCCCTACTTCGTTATGAGATGGACAGACAAATGATTGTATACAATCGATGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

672

Amino Acids

74.72

Weight (kDa)

6.34

Isoelectric Point (pI)

35.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 91 - 169 4.8e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 144 - 206 1.1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 189 - 275 2.7e-16 Ankyrin repeats (3 copies)
Ank PF00023 251 - 274 2.7e-07 Ankyrin repeat
PGG PF13962 452 - 564 2.4e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1520
Acc36I ACCTGC 1 cut(s) 1415
Acc65I GGTACC 1 cut(s) 1315
AccB1I GGYRCC 1 cut(s) 1315
AccI GTMKAC 2 cut(s) 93, 2001
AccII CGCG 1 cut(s) 1631
AciI CCGC 8 cut(s) 102, 332, 472, 764, 981, 1594, 1876, 1930
AclWI GGATC 3 cut(s) 623, 1025, 1471
AcoI YGGCCR 1 cut(s) 413
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 721, 782, 1317, 1960
AflIII ACRYGT 1 cut(s) 1629
AgeI ACCGGT 1 cut(s) 1318
AgsI TTSAA 5 cut(s) 362, 608, 798, 1171, 1208
AjnI CCWGG 2 cut(s) 1282, 1438
AluBI AGCT 9 cut(s) 50, 85, 410, 635, 916, 1502, 1511, 1760, 1939
AluI AGCT 9 cut(s) 50, 85, 410, 635, 916, 1502, 1511, 1760, 1939
Alw26I GTCTC 5 cut(s) 551, 1071, 1212, 1901, 1912
AlwI GGATC 3 cut(s) 623, 1025, 1471
Ama87I CYCGRG 1 cut(s) 784
AoxI GGCC 5 cut(s) 36, 413, 465, 643, 1243
ApeKI GCWGC 8 cut(s) 292, 575, 671, 776, 833, 881, 1421, 1499
ArsI GACNNNNNNTTYG 2 cut(s) 1460, 1492
AseI ATTAAT 1 cut(s) 1773
AsiGI ACCGGT 1 cut(s) 1318
Asp718I GGTACC 1 cut(s) 1315
AspLEI GCGC 1 cut(s) 1133
AspS9I GGNCC 3 cut(s) 644, 1243, 1798
AsuC2I CCSGG 1 cut(s) 44
AsuHPI GGTGA 6 cut(s) 323, 505, 761, 1103, 1627, 1672
AvaI CYCGRG 1 cut(s) 784
AvaII GGWCC 1 cut(s) 1798
BaeGI GKGCMC 1 cut(s) 1682
BaeI ACNNNNGTAYC 2 cut(s) 967, 1000
BanI GGYRCC 1 cut(s) 1315
BauI CACGAG 1 cut(s) 461
BbsI GAAGAC 1 cut(s) 146
BbvI GCAGC 8 cut(s) 279, 562, 658, 763, 820, 893, 1433, 1511
BccI CCATC 3 cut(s) 47, 257, 1975
BceAI ACGGC 2 cut(s) 452, 1179
BcgI CGANNNNNNTGC 2 cut(s) 104, 138
BciT130I CCWGG 2 cut(s) 1284, 1440
BciVI GTATCC 2 cut(s) 995, 1883
BcnI CCSGG 1 cut(s) 44
BcoDI GTCTC 5 cut(s) 551, 1071, 1212, 1901, 1912
BfaI CTAG 8 cut(s) 24, 29, 713, 1025, 1149, 1388, 1487, 1548
BfmI CTRYAG 3 cut(s) 293, 354, 672
BfoI RGCGCY 1 cut(s) 1134
BfuAI ACCTGC 1 cut(s) 1415
BfuI GTATCC 2 cut(s) 995, 1883
BglII AGATCT 1 cut(s) 827
BlpI GCTNAGC 1 cut(s) 1040
BmcAI AGTACT 1 cut(s) 1960
Bme1390I CCNGG 3 cut(s) 44, 1284, 1440
Bme18I GGWCC 1 cut(s) 1798
BmeT110I CYCGRG 1 cut(s) 784
BmgT120I GGNCC 3 cut(s) 644, 1243, 1798
BmiI GGNNCC 3 cut(s) 646, 1317, 1800
BmrFI CCNGG 3 cut(s) 44, 1284, 1440
BmsI GCATC 6 cut(s) 112, 746, 1135, 1425, 1576, 1925
BpiI GAAGAC 1 cut(s) 146
Bpu1102I GCTNAGC 1 cut(s) 1040
BpuMI CCSGG 1 cut(s) 44
Bsa29I ATCGAT 1 cut(s) 2008
BsaBI GATNNNNATC 2 cut(s) 1107, 1380
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1912
BsaJI CCNNGG 3 cut(s) 640, 1034, 1471
BsaWI WCCGGW 2 cut(s) 53, 1318
Bse118I RCCGGY 1 cut(s) 1318
Bse1I ACTGG 1 cut(s) 181
Bse3DI GCAATG 2 cut(s) 327, 1662
Bse8I GATNNNNATC 2 cut(s) 1107, 1380
BseBI CCWGG 2 cut(s) 1284, 1440
BseCI ATCGAT 1 cut(s) 2008
BseDI CCNNGG 3 cut(s) 640, 1034, 1471
BseGI GGATG 4 cut(s) 39, 761, 1047, 1860
BseJI GATNNNNATC 2 cut(s) 1107, 1380
BseMI GCAATG 2 cut(s) 327, 1662
BseMII CTCAG 1 cut(s) 1599
BseNI ACTGG 1 cut(s) 181
BseRI GAGGAG 4 cut(s) 417, 420, 552, 1325
BseSI GKGCMC 1 cut(s) 1682
BseXI GCAGC 8 cut(s) 279, 562, 658, 763, 820, 893, 1433, 1511
BseYI CCCAGC 1 cut(s) 1849
BsgI GTGCAG 1 cut(s) 1518
Bsh1236I CGCG 1 cut(s) 1631
Bsh1285I CGRYCG 1 cut(s) 226
BshFI GGCC 5 cut(s) 38, 415, 467, 645, 1245
BshNI GGYRCC 1 cut(s) 1315
BshTI ACCGGT 1 cut(s) 1318
BshVI ATCGAT 1 cut(s) 2008
BsiEI CGRYCG 1 cut(s) 226
BsiHKCI CYCGRG 1 cut(s) 784
BsiSI CCGG 4 cut(s) 44, 54, 552, 1319
BslFI GGGAC 1 cut(s) 1316
BsmAI GTCTC 5 cut(s) 551, 1071, 1212, 1901, 1912
BsmFI GGGAC 1 cut(s) 1316
BsmI GAATGC 1 cut(s) 1166
BsnI GGCC 5 cut(s) 38, 415, 467, 645, 1245
Bso31I GGTCTC 1 cut(s) 1912
BsoBI CYCGRG 1 cut(s) 784
Bsp1286I GDGCHC 1 cut(s) 1682
Bsp143I GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
Bsp1720I GCTNAGC 1 cut(s) 1040
Bsp19I CCATGG 1 cut(s) 1034
BspACI CCGC 8 cut(s) 102, 332, 472, 764, 981, 1594, 1876, 1930
BspANI GGCC 5 cut(s) 38, 415, 467, 645, 1245
BspCNI CTCAG 1 cut(s) 1600
BspDI ATCGAT 1 cut(s) 2008
BspFNI CGCG 1 cut(s) 1631
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 3 cut(s) 646, 1317, 1800
BspMAI CTGCAG 2 cut(s) 297, 676
BspMI ACCTGC 1 cut(s) 1415
BspPI GGATC 3 cut(s) 623, 1025, 1471
BspT107I GGYRCC 1 cut(s) 1315
BspTNI GGTCTC 1 cut(s) 1912
BsrDI GCAATG 2 cut(s) 327, 1662
BsrFI RCCGGY 1 cut(s) 1318
BsrI ACTGG 1 cut(s) 181
BssAI RCCGGY 1 cut(s) 1318
BssECI CCNNGG 3 cut(s) 640, 1034, 1471
BssMI GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
BssNAI GTATAC 2 cut(s) 94, 2002
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 461
BssT1I CCWWGG 3 cut(s) 640, 1034, 1471
Bst1107I GTATAC 2 cut(s) 94, 2002
Bst2BI CACGAG 1 cut(s) 461
Bst2UI CCWGG 2 cut(s) 1284, 1440
Bst4CI ACNGT 5 cut(s) 620, 810, 1364, 1411, 1723
Bst6I CTCTTC 1 cut(s) 27
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstC8I GCNNGC 2 cut(s) 87, 669
BstDEI CTNAG 2 cut(s) 1040, 1608
BstDSI CCRYGG 1 cut(s) 1034
BstEII GGTNACC 1 cut(s) 1445
BstF5I GGATG 4 cut(s) 39, 761, 1047, 1860
BstFNI CGCG 1 cut(s) 1631
BstH2I RGCGCY 1 cut(s) 1134
BstHHI GCGC 1 cut(s) 1133
BstKTI GATC 7 cut(s) 226, 309, 631, 691, 830, 1033, 1466
BstMAI GTCTC 5 cut(s) 551, 1071, 1212, 1901, 1912
BstMBI GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
BstMCI CGRYCG 1 cut(s) 226
BstMWI GCNNNNNNNGC 8 cut(s) 548, 668, 1145, 1487, 1496, 1508, 1652, 1936
BstNI CCWGG 2 cut(s) 1284, 1440
BstNSI RCATGY 2 cut(s) 210, 671
BstPI GGTNACC 1 cut(s) 1445
BstSCI CCNGG 3 cut(s) 42, 1282, 1438
BstSFI CTRYAG 3 cut(s) 293, 354, 672
BstSLI GKGCMC 1 cut(s) 1682
BstUI CGCG 1 cut(s) 1631
BstV1I GCAGC 8 cut(s) 279, 562, 658, 763, 820, 893, 1433, 1511
BstV2I GAAGAC 1 cut(s) 146
BstX2I RGATCY 2 cut(s) 628, 827
BstYI RGATCY 2 cut(s) 628, 827
BstZ17I GTATAC 2 cut(s) 94, 2002
Bsu15I ATCGAT 1 cut(s) 2008
BsuI GTATCC 2 cut(s) 995, 1883
BsuRI GGCC 5 cut(s) 38, 415, 467, 645, 1245
BsuTUI ATCGAT 1 cut(s) 2008
BtgI CCRYGG 1 cut(s) 1034
BtgZI GCGATG 1 cut(s) 75
BtsCI GGATG 4 cut(s) 39, 761, 1047, 1860
BtsI GCAGTG 4 cut(s) 315, 348, 976, 1695
BtsIMutI CAGTG 5 cut(s) 315, 348, 976, 1012, 1695
BveI ACCTGC 1 cut(s) 1415
Cac8I GCNNGC 2 cut(s) 87, 669
CciI TCATGA 1 cut(s) 520
CfoI GCGC 1 cut(s) 1133
Cfr10I RCCGGY 1 cut(s) 1318
Cfr13I GGNCC 3 cut(s) 644, 1243, 1798
ClaI ATCGAT 1 cut(s) 2008
CseI GACGC 3 cut(s) 140, 354, 873
Csp6I GTAC 4 cut(s) 720, 781, 1316, 1959
CspAI ACCGGT 1 cut(s) 1318
CviQI GTAC 4 cut(s) 720, 781, 1316, 1959
DdeI CTNAG 2 cut(s) 1040, 1608
DpnI GATC 7 cut(s) 225, 308, 630, 690, 829, 1032, 1465
DpnII GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
DraI TTTAAA 1 cut(s) 1590
EaeI YGGCCR 1 cut(s) 413
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 3 cut(s) 640, 1034, 1471
Eco31I GGTCTC 1 cut(s) 1912
Eco32I GATATC 2 cut(s) 590, 1198
Eco47I GGWCC 1 cut(s) 1798
Eco88I CYCGRG 1 cut(s) 784
Eco91I GGTNACC 1 cut(s) 1445
EcoO109I RGGNCCY 2 cut(s) 644, 1798
EcoO65I GGTNACC 1 cut(s) 1445
EcoRII CCWGG 2 cut(s) 1282, 1438
EcoRV GATATC 2 cut(s) 590, 1198
EcoT14I CCWWGG 3 cut(s) 640, 1034, 1471
ErhI CCWWGG 3 cut(s) 640, 1034, 1471
FalI AAGNNNNNCTT 2 cut(s) 1486, 1518
FaqI GGGAC 1 cut(s) 1316
FauNDI CATATG 1 cut(s) 1684
FblI GTMKAC 2 cut(s) 93, 2001
FokI GGATG 4 cut(s) 26, 768, 1034, 1867
FspBI CTAG 8 cut(s) 24, 29, 713, 1025, 1149, 1388, 1487, 1548
GlaI GCGC 1 cut(s) 1132
GsaI CCCAGC 1 cut(s) 1853
HaeII RGCGCY 1 cut(s) 1134
HaeIII GGCC 5 cut(s) 38, 415, 467, 645, 1245
HapII CCGG 4 cut(s) 44, 54, 552, 1319
HgaI GACGC 3 cut(s) 140, 354, 873
HhaI GCGC 1 cut(s) 1133
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1131
HinP1I GCGC 1 cut(s) 1131
HincII GTYRAC 2 cut(s) 219, 504
HindII GTYRAC 2 cut(s) 219, 504
HindIII AAGCTT 1 cut(s) 1509
HinfI GANTC 8 cut(s) 169, 265, 388, 420, 559, 1220, 1376, 1822
HpaII CCGG 4 cut(s) 44, 54, 552, 1319
HphI GGTGA 6 cut(s) 323, 505, 761, 1103, 1627, 1672
Hpy166II GTNNAC 7 cut(s) 94, 219, 281, 504, 952, 1635, 2002
Hpy188I TCNGA 3 cut(s) 133, 1468, 1609
Hpy188III TCNNGA 8 cut(s) 158, 259, 269, 392, 521, 593, 692, 932
Hpy8I GTNNAC 7 cut(s) 94, 219, 281, 504, 952, 1635, 2002
Hpy99I CGWCG 2 cut(s) 257, 260
HpyAV CCTTC 4 cut(s) 68, 392, 881, 1751
HpyCH4III ACNGT 5 cut(s) 620, 810, 1364, 1411, 1723
HpyCH4IV ACGT 3 cut(s) 215, 718, 840
HpyF10VI GCNNNNNNNGC 8 cut(s) 548, 668, 1145, 1487, 1496, 1508, 1652, 1936
HpyF3I CTNAG 2 cut(s) 1040, 1608
HpySE526I ACGT 3 cut(s) 215, 718, 840
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1131
KpnI GGTACC 1 cut(s) 1319
Kzo9I GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
LmnI GCTCC 3 cut(s) 82, 148, 407
Lsp1109I GCAGC 8 cut(s) 279, 562, 658, 763, 820, 893, 1433, 1511
LweI GCATC 6 cut(s) 112, 746, 1135, 1425, 1576, 1925
MaeI CTAG 8 cut(s) 24, 29, 713, 1025, 1149, 1388, 1487, 1548
MaeII ACGT 3 cut(s) 215, 718, 840
MaeIII GTNAC 7 cut(s) 311, 392, 493, 708, 788, 810, 1445
MalI GATC 7 cut(s) 225, 308, 630, 690, 829, 1032, 1465
MboI GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
MboII GAAGA 9 cut(s) 44, 146, 274, 1364, 1367, 1376, 1695, 1831, 1870
MfeI CAATTG 1 cut(s) 798
MflI RGATCY 2 cut(s) 628, 827
MhlI GDGCHC 1 cut(s) 1682
MluCI AATT 9 cut(s) 10, 241, 798, 944, 967, 1259, 1482, 1763, 1880
MluI ACGCGT 1 cut(s) 1629
MlyI GAGTC 4 cut(s) 163, 553, 1214, 1831
MmeI TCCRAC 2 cut(s) 197, 324
MseI TTAA 5 cut(s) 477, 843, 1262, 1589, 1773
MslI CAYNNNNRTG 3 cut(s) 486, 900, 1535
MspI CCGG 4 cut(s) 44, 54, 552, 1319
MspR9I CCNGG 3 cut(s) 44, 1284, 1440
MunI CAATTG 1 cut(s) 798
Mva1269I GAATGC 1 cut(s) 1166
MvaI CCWGG 2 cut(s) 1284, 1440
MvnI CGCG 1 cut(s) 1631
MwoI GCNNNNNNNGC 8 cut(s) 548, 668, 1145, 1487, 1496, 1508, 1652, 1936
NciI CCSGG 1 cut(s) 44
NcoI CCATGG 1 cut(s) 1034
NdeI CATATG 1 cut(s) 1684
NdeII GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
NlaIV GGNNCC 3 cut(s) 646, 1317, 1800
NmeAIII GCCGAG 2 cut(s) 441, 518
NmuCI GTSAC 4 cut(s) 311, 392, 493, 788
NspI RCATGY 2 cut(s) 210, 671
PaeI GCATGC 1 cut(s) 671
PagI TCATGA 1 cut(s) 520
PcsI WCGNNNNNNNCGW 1 cut(s) 1026
PctI GAATGC 1 cut(s) 1166
PfeI GAWTC 4 cut(s) 265, 388, 420, 1376
PfoI TCCNGGA 1 cut(s) 42
PinAI ACCGGT 1 cut(s) 1318
Ple19I CGATCG 1 cut(s) 226
PleI GAGTC 4 cut(s) 163, 553, 1214, 1830
PpsI GAGTC 4 cut(s) 163, 553, 1214, 1830
PpuMI RGGWCCY 1 cut(s) 1798
PshBI ATTAAT 1 cut(s) 1773
PsiI TTATAA 1 cut(s) 1520
Psp5II RGGWCCY 1 cut(s) 1798
Psp6I CCWGG 2 cut(s) 1282, 1438
PspEI GGTNACC 1 cut(s) 1445
PspFI CCCAGC 1 cut(s) 1849
PspGI CCWGG 2 cut(s) 1282, 1438
PspN4I GGNNCC 3 cut(s) 646, 1317, 1800
PspPI GGNCC 3 cut(s) 644, 1243, 1798
PspPPI RGGWCCY 1 cut(s) 1798
PstI CTGCAG 2 cut(s) 297, 676
PsuI RGATCY 2 cut(s) 628, 827
PvuI CGATCG 1 cut(s) 226
RsaI GTAC 4 cut(s) 721, 782, 1317, 1960
RsaNI GTAC 4 cut(s) 720, 781, 1316, 1959
RseI CAYNNNNRTG 3 cut(s) 486, 900, 1535
SaqAI TTAA 5 cut(s) 477, 843, 1262, 1589, 1773
Sau3AI GATC 7 cut(s) 223, 306, 628, 688, 827, 1030, 1463
Sau96I GGNCC 3 cut(s) 644, 1243, 1798
ScaI AGTACT 1 cut(s) 1960
SchI GAGTC 4 cut(s) 163, 553, 1214, 1831
ScrFI CCNGG 3 cut(s) 44, 1284, 1440
SduI GDGCHC 1 cut(s) 1682
SfaNI GCATC 6 cut(s) 112, 746, 1135, 1425, 1576, 1925
SfcI CTRYAG 3 cut(s) 293, 354, 672
SinI GGWCC 1 cut(s) 1798
SmiMI CAYNNNNRTG 3 cut(s) 486, 900, 1535
SphI GCATGC 1 cut(s) 671
Sse9I AATT 9 cut(s) 10, 241, 798, 944, 967, 1259, 1482, 1763, 1880
SsiI CCGC 8 cut(s) 102, 332, 472, 764, 981, 1594, 1876, 1930
SspI AATATT 1 cut(s) 165
SspMI CTAG 8 cut(s) 24, 29, 713, 1025, 1149, 1388, 1487, 1548
StyD4I CCNGG 3 cut(s) 42, 1282, 1438
StyI CCWWGG 3 cut(s) 640, 1034, 1471
TaaI ACNGT 5 cut(s) 620, 810, 1364, 1411, 1723
TaiI ACGT 3 cut(s) 218, 721, 843
TaqI TCGA 4 cut(s) 258, 1291, 1577, 2008
TasI AATT 9 cut(s) 10, 241, 798, 944, 967, 1259, 1482, 1763, 1880
TatI WGTACW 1 cut(s) 1958
TauI GCSGC 2 cut(s) 104, 335
TfiI GAWTC 4 cut(s) 265, 388, 420, 1376
Tru1I TTAA 5 cut(s) 477, 843, 1262, 1589, 1773
Tru9I TTAA 5 cut(s) 477, 843, 1262, 1589, 1773
TscAI CASTG 5 cut(s) 322, 355, 983, 1012, 1695
TseFI GTSAC 4 cut(s) 311, 392, 493, 788
TseI GCWGC 8 cut(s) 292, 575, 671, 776, 833, 881, 1421, 1499
Tsp45I GTSAC 4 cut(s) 311, 392, 493, 788
TspDTI ATGAA 7 cut(s) 78, 509, 762, 1695, 1794, 1818, 1871
TspGWI ACGGA 3 cut(s) 357, 716, 1106
TspRI CASTG 5 cut(s) 322, 355, 983, 1012, 1695
VpaK11BI GGWCC 1 cut(s) 1798
VspI ATTAAT 1 cut(s) 1773
XceI RCATGY 2 cut(s) 210, 671
XcmI CCANNNNNNNNNTGG 2 cut(s) 647, 1387
XmiI GTMKAC 2 cut(s) 93, 2001
XspI CTAG 8 cut(s) 24, 29, 713, 1025, 1149, 1388, 1487, 1548
ZrmI AGTACT 1 cut(s) 1960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.