RLG00000002808

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000489
Physical Location & Seq
Reverse (-)
40187180 .. 40189600
2421 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002808

Sequence Viewer

Length: 1929 bp
ATGAATCCCTCTGATTCAGCTGAGACGGAGAGTAGTCCAACATCGGCCTATCATGCCACGATATTGGAGGAGACCAACGCAATGTTCTGTTCTGAATGGAACCAGCCAAAATCTATACCAGTCAAGAAAAGCTTAAGCGGCATGGATACTAAGGTGTTCAAGGCGGCACGAGAGGGCAATATTGATGCCCTTAGAGAACATAGTGATTATCTTCACCAGATATTGACTCCAACCAAAAACACAGTTCTCCATGTCTATATAGCTTGCGTAGGCAGTGCAAGGTTGACAGAGTCTAAAGAATTGCTGAAGTCAGCCGAGGCTGTAAGGGAGATGCTTAAAATGTGCCAGCGGCTACTATTGCAGCCAAACGAGAGCGGTGATACTGTCTTACACTTAGCGGCAAGACACGGACGTGCTGACATAGTTGGAGTTCTTATTCAGGCTGCAAAAGACTGGCATGGTGACCTCGAGGAAGGTATCACATCAAAAGAAGTATGCTACCAGTTTCTCATAAGAAGACGTAACGAGGAGAAAAACACAGCCTTGCACGAGGCAGTGCGGTTTAATCATCTAGATGTGGTAAAGATATTGACTGGGGAAGACCCTGAGTTTTTGTACTCTTCTAATGATGCTGACGAAACTCCAGTATACATGGCTGCCGAAAGAGGATATCACAAATTGGTTTTTGAAATCCTCGACACCTGCACAAGTCCATCCTACCAAGGACCCGATGGTTTAACAGCTCTACACGTTGCAGCTGCCTACGGTTATGATCAAATAACGAGAAGACTACTAGAGAAGGAAATGACGCTAGCAACAGCAGCAGACAAACGAGGACTTACTCCACTTTATATGGCTGCAGGGCTTGGTCACGTTTCAATTGTGAAACAAATACTTGAATGTGACAAGTCCACTGCCTACATTGGCGAAATTATTTACAAGATGACACCCGTTCACATTGCAGCCAATGCACGGCATGTAGATGTACTGAAACAGCTTATTTTCTATTGCCCTGACAGTTTCGAATTGGTGGACATTGATGGTCTCAATGCCCTACATTTTGCAATTATTGGTAATAAATATAAAGTAGAAGAGTTTGTTCGAAAAGATCCATGGCTTAGTAGCGTCCTTTTAAATAGCAAAGATTCTGTCGGGAACACACCTCTCCATCAAATTGCTACTTCTAAAAAATACGAAGGCTTGAAATTTATCAGTGATTCGAGAGTTGATAAGATGGCATTCAACAAAAAAAATAAGAACGCGCTAGACATCATTCTAAAGAGCACGAGTTCTCCGTGGTGGAAGAGTAGACTCTATCAAGGTTTGAAAAAGTCTGGTGCAAGAGTAGGTCAACGAAAGTCAAGAGACAAAGATGGTGGCACGAAAGACCATGTAAGTAAAGGTGACAAAGAGTCAAACCGCAAGGAAATAAAAGAATCTCATTTGGTAGTGTCTGCACTCATAGCAACTGTAACCTTCGCAGCAGGCTTCACTGTGCCTGGTGGTTATCAAAGTGAAAAAGGGCCGGATCAAGGTTTTGCGGTTCTATCAAGAAATGCAGCTTTCAAAGCATTTGTGATAACAAATACATTAGCCATGACTCTGTCCAGTTGTGCCGTCATGATACGCTTTTTCTTGTCGCTAAAAGGGGAATATAGGCCAGGTTCATTATCTGTGCCAATAAGTTGTGCATTTTGGGCCCTACTTGCAATGGTGGGTGCATTCCTTACCGGTTCATATGCAGTATTAGGTGGTCGTTCTTCATTAGGACTTGCTATTGCGGTTTGTGTGCTCGGCAGCGTACTCTTCTCGGTTTTGGGTTTTGTTTCCATTTCTCCAGCTTTCAAAACTGTCCGTAAGTGTGTCTCTCATCTCCATGAGCGGATAGTTGATCGGCTCGGATTGGAGCATTATTATTATTATTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

643

Amino Acids

71.06

Weight (kDa)

8.62

Isoelectric Point (pI)

36.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 218 - 302 2.5e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 290 - 363 6.1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 319 - 412 1.9e-07 Ankyrin repeats (3 copies)
PGG PF13962 473 - 582 4.7e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 710
AbsI CCTCGAGG 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 710
AccBSI CCGCTC 2 cut(s) 375, 1882
AccI GTMKAC 2 cut(s) 648, 1309
AccII CGCG 1 cut(s) 1262
AclWI GGATC 2 cut(s) 1103, 1536
AcsI RAATTY 1 cut(s) 1205
AcuI CTGAAG 1 cut(s) 326
AfaI GTAC 3 cut(s) 617, 987, 1803
AfiI CCNNNNNNNGG 2 cut(s) 972, 1532
AflII CTTAAG 1 cut(s) 133
AflIII ACRYGT 1 cut(s) 748
AgeI ACCGGT 1 cut(s) 1730
AgsI TTSAA 9 cut(s) 160, 689, 879, 899, 1204, 1243, 1327, 1567, 1846
AhdI GACNNNNNGTC 1 cut(s) 1411
AjiI CACGTC 1 cut(s) 413
AjnI CCWGG 2 cut(s) 1498, 1660
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AleI CACNNNNGTG 1 cut(s) 411
AluBI AGCT 8 cut(s) 20, 132, 263, 743, 758, 997, 1562, 1841
AluI AGCT 8 cut(s) 20, 132, 263, 743, 758, 997, 1562, 1841
Alw21I GWGCWC 2 cut(s) 1286, 1794
Alw26I GTCTC 5 cut(s) 17, 65, 1049, 1359, 1870
AlwI GGATC 2 cut(s) 1103, 1536
Ama87I CYCGRG 1 cut(s) 467
AoxI GGCC 4 cut(s) 45, 1523, 1658, 1698
ApaI GGGCCC 1 cut(s) 1702
ApoI RAATTY 1 cut(s) 1205
ArsI GACNNNNNNTTYG 2 cut(s) 1134, 1166
AsiGI ACCGGT 1 cut(s) 1730
AspLEI GCGC 1 cut(s) 1264
AspS9I GGNCC 4 cut(s) 725, 1523, 1698, 1699
AsuHPI GGTGA 4 cut(s) 206, 389, 473, 1415
AsuII TTCGAA 2 cut(s) 1023, 1102
AsuNHI GCTAGC 1 cut(s) 811
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 1 cut(s) 725
BaeGI GKGCMC 1 cut(s) 1702
BaeI ACNNNNGTAYC 2 cut(s) 138, 171
BanII GRGCYC 1 cut(s) 1702
BauI CACGAG 3 cut(s) 168, 548, 1285
BbsI GAAGAC 3 cut(s) 523, 606, 793
Bbv12I GWGCWC 2 cut(s) 1286, 1794
BccI CCATC 6 cut(s) 721, 725, 1034, 1176, 1228, 1367
BceAI ACGGC 2 cut(s) 989, 1601
BciT130I CCWGG 2 cut(s) 1500, 1662
BciVI GTATCC 1 cut(s) 139
BclI TGATCA 1 cut(s) 772
BcoDI GTCTC 5 cut(s) 17, 65, 1049, 1359, 1870
BfaI CTAG 4 cut(s) 572, 794, 812, 1265
BfmI CTRYAG 1 cut(s) 858
BfrI CTTAAG 1 cut(s) 133
BfuAI ACCTGC 1 cut(s) 710
BfuI GTATCC 1 cut(s) 139
Bme1390I CCNGG 2 cut(s) 1500, 1662
Bme18I GGWCC 1 cut(s) 725
BmeRI GACNNNNNGTC 1 cut(s) 1411
BmeT110I CYCGRG 1 cut(s) 467
BmgBI CACGTC 1 cut(s) 413
BmgT120I GGNCC 4 cut(s) 725, 1523, 1698, 1699
BmiI GGNNCC 3 cut(s) 101, 727, 1700
BmrFI CCNGG 2 cut(s) 1500, 1662
BmrI ACTGGG 1 cut(s) 603
BmsI GCATC 3 cut(s) 175, 321, 619
BmtI GCTAGC 1 cut(s) 815
BmuI ACTGGG 1 cut(s) 603
BpiI GAAGAC 3 cut(s) 523, 606, 793
BpmI CTGGAG 2 cut(s) 627, 1821
Bpu14I TTCGAA 2 cut(s) 1023, 1102
BsaI GGTCTC 2 cut(s) 65, 1049
BsaJI CCNNGG 4 cut(s) 315, 721, 1112, 1295
BsaWI WCCGGW 1 cut(s) 1730
BsaXI ACNNNNNCTCC 2 cut(s) 1276, 1306
Bsc4I CCNNNNNNNGG 2 cut(s) 972, 1532
Bse118I RCCGGY 1 cut(s) 1730
Bse1I ACTGG 6 cut(s) 119, 458, 502, 598, 644, 1608
Bse3DI GCAATG 3 cut(s) 87, 957, 1716
BseBI CCWGG 2 cut(s) 1500, 1662
BseDI CCNNGG 4 cut(s) 315, 721, 1112, 1295
BseGI GGATG 1 cut(s) 713
BseLI CCNNNNNNNGG 2 cut(s) 972, 1532
BseMI GCAATG 3 cut(s) 87, 957, 1716
BseMII CTCAG 2 cut(s) 12, 597
BseNI ACTGG 6 cut(s) 119, 458, 502, 598, 644, 1608
BseRI GAGGAG 2 cut(s) 83, 542
BseSI GKGCMC 1 cut(s) 1702
BsgI GTGCAG 2 cut(s) 688, 1440
Bsh1236I CGCG 1 cut(s) 1262
BshFI GGCC 4 cut(s) 47, 1525, 1660, 1700
BshTI ACCGGT 1 cut(s) 1730
BsiHKAI GWGCWC 2 cut(s) 1286, 1794
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 2 cut(s) 1526, 1731
BslI CCNNNNNNNGG 2 cut(s) 972, 1532
BsmAI GTCTC 5 cut(s) 17, 65, 1049, 1359, 1870
BsmBI CGTCTC 1 cut(s) 17
BsmI GAATGC 2 cut(s) 1238, 1721
BsnI GGCC 4 cut(s) 47, 1525, 1660, 1700
Bso31I GGTCTC 2 cut(s) 65, 1049
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 2 cut(s) 1023, 1102
Bsp120I GGGCCC 1 cut(s) 1698
Bsp1286I GDGCHC 3 cut(s) 1286, 1702, 1794
Bsp143I GATC 4 cut(s) 772, 1108, 1528, 1891
Bsp19I CCATGG 1 cut(s) 1112
BspANI GGCC 4 cut(s) 47, 1525, 1660, 1700
BspCNI CTCAG 2 cut(s) 13, 598
BspFNI CGCG 1 cut(s) 1262
BspHI TCATGA 1 cut(s) 1620
BspLI GGNNCC 3 cut(s) 101, 727, 1700
BspMAI CTGCAG 1 cut(s) 862
BspMI ACCTGC 1 cut(s) 710
BspOI GCTAGC 1 cut(s) 815
BspPI GGATC 2 cut(s) 1103, 1536
BspT104I TTCGAA 2 cut(s) 1023, 1102
BspTI CTTAAG 1 cut(s) 133
BspTNI GGTCTC 2 cut(s) 65, 1049
BsrBI CCGCTC 2 cut(s) 375, 1882
BsrDI GCAATG 3 cut(s) 87, 957, 1716
BsrFI RCCGGY 1 cut(s) 1730
BsrI ACTGG 6 cut(s) 119, 458, 502, 598, 644, 1608
BssAI RCCGGY 1 cut(s) 1730
BssECI CCNNGG 4 cut(s) 315, 721, 1112, 1295
BssMI GATC 4 cut(s) 772, 1108, 1528, 1891
BssNAI GTATAC 1 cut(s) 649
BssSI CACGAG 3 cut(s) 168, 548, 1285
BssT1I CCWWGG 2 cut(s) 721, 1112
Bst1107I GTATAC 1 cut(s) 649
Bst2BI CACGAG 3 cut(s) 168, 548, 1285
Bst2UI CCWGG 2 cut(s) 1500, 1662
Bst4CI ACNGT 7 cut(s) 244, 385, 767, 1019, 1471, 1495, 1852
Bst6I CTCTTC 4 cut(s) 625, 1086, 1298, 1811
BstAFI CTTAAG 1 cut(s) 133
BstAPI GCANNNNNTGC 1 cut(s) 968
BstBI TTCGAA 2 cut(s) 1023, 1102
BstC8I GCNNGC 4 cut(s) 265, 347, 813, 1486
BstDEI CTNAG 6 cut(s) 21, 150, 191, 394, 606, 1118
BstDSI CCRYGG 2 cut(s) 1112, 1295
BstEII GGTNACC 1 cut(s) 461
BstF5I GGATG 1 cut(s) 713
BstFNI CGCG 1 cut(s) 1262
BstHHI GCGC 1 cut(s) 1264
BstKTI GATC 4 cut(s) 775, 1111, 1531, 1894
BstMAI GTCTC 5 cut(s) 17, 65, 1049, 1359, 1870
BstMBI GATC 4 cut(s) 772, 1108, 1528, 1891
BstMWI GCNNNNNNNGC 9 cut(s) 53, 138, 358, 821, 968, 1463, 1568, 1697, 1706
BstNI CCWGG 2 cut(s) 1500, 1662
BstNSI RCATGY 1 cut(s) 980
BstPI GGTNACC 1 cut(s) 461
BstSCI CCNGG 2 cut(s) 1498, 1660
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 1 cut(s) 1702
BstUI CGCG 1 cut(s) 1262
BstV2I GAAGAC 3 cut(s) 523, 606, 793
BstX2I RGATCY 1 cut(s) 1108
BstXI CCANNNNNNTGG 1 cut(s) 64
BstYI RGATCY 1 cut(s) 1108
BstZ17I GTATAC 1 cut(s) 649
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 4 cut(s) 47, 1525, 1660, 1700
BtgI CCRYGG 2 cut(s) 1112, 1295
BtrI CACGTC 1 cut(s) 413
BtsCI GGATG 1 cut(s) 713
BtsI GCAGTG 3 cut(s) 280, 561, 912
BtsIMutI CAGTG 5 cut(s) 280, 561, 912, 1219, 1491
BveI ACCTGC 1 cut(s) 710
Cac8I GCNNGC 4 cut(s) 265, 347, 813, 1486
CciI TCATGA 1 cut(s) 1620
CfoI GCGC 1 cut(s) 1264
Cfr10I RCCGGY 1 cut(s) 1730
Cfr13I GGNCC 4 cut(s) 725, 1523, 1698, 1699
CseI GACGC 2 cut(s) 817, 1114
Csp6I GTAC 3 cut(s) 616, 986, 1802
CspAI ACCGGT 1 cut(s) 1730
CspCI CAANNNNNGTGG 2 cut(s) 1357, 1392
CviQI GTAC 3 cut(s) 616, 986, 1802
DdeI CTNAG 6 cut(s) 21, 150, 191, 394, 606, 1118
DpnI GATC 4 cut(s) 774, 1110, 1530, 1893
DpnII GATC 4 cut(s) 772, 1108, 1528, 1891
DraI TTTAAA 1 cut(s) 1134
DriI GACNNNNNGTC 1 cut(s) 1411
Eam1104I CTCTTC 4 cut(s) 625, 1086, 1298, 1811
Eam1105I GACNNNNNGTC 1 cut(s) 1411
EarI CTCTTC 4 cut(s) 625, 1086, 1298, 1811
Eco130I CCWWGG 2 cut(s) 721, 1112
Eco24I GRGCYC 1 cut(s) 1702
Eco31I GGTCTC 2 cut(s) 65, 1049
Eco32I GATATC 1 cut(s) 671
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 1 cut(s) 326
Eco88I CYCGRG 1 cut(s) 467
Eco91I GGTNACC 1 cut(s) 461
EcoO109I RGGNCCY 2 cut(s) 725, 1699
EcoO65I GGTNACC 1 cut(s) 461
EcoRII CCWGG 2 cut(s) 1498, 1660
EcoRV GATATC 1 cut(s) 671
EcoT14I CCWWGG 2 cut(s) 721, 1112
EcoT38I GRGCYC 1 cut(s) 1702
ErhI CCWWGG 2 cut(s) 721, 1112
Esp3I CGTCTC 1 cut(s) 17
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FauNDI CATATG 1 cut(s) 1738
FbaI TGATCA 1 cut(s) 772
FblI GTMKAC 2 cut(s) 648, 1309
FokI GGATG 1 cut(s) 700
FriOI GRGCYC 1 cut(s) 1702
FspBI CTAG 4 cut(s) 572, 794, 812, 1265
GlaI GCGC 1 cut(s) 1263
GsuI CTGGAG 2 cut(s) 627, 1821
HaeIII GGCC 4 cut(s) 47, 1525, 1660, 1700
HapII CCGG 2 cut(s) 1526, 1731
HgaI GACGC 2 cut(s) 817, 1114
HhaI GCGC 1 cut(s) 1264
Hin6I GCGC 1 cut(s) 1262
HinP1I GCGC 1 cut(s) 1262
HincII GTYRAC 2 cut(s) 285, 1352
HindII GTYRAC 2 cut(s) 285, 1352
HindIII AAGCTT 1 cut(s) 130
HpaII CCGG 2 cut(s) 1526, 1731
HphI GGTGA 4 cut(s) 206, 389, 473, 1415
Hpy166II GTNNAC 7 cut(s) 285, 649, 912, 955, 1033, 1310, 1352
Hpy188I TCNGA 3 cut(s) 13, 94, 1901
Hpy188III TCNNGA 7 cut(s) 124, 572, 1153, 1221, 1362, 1551, 1621
Hpy8I GTNNAC 7 cut(s) 285, 649, 912, 955, 1033, 1310, 1352
HpyAV CCTTC 4 cut(s) 467, 793, 1190, 1486
HpyCH4III ACNGT 7 cut(s) 244, 385, 767, 1019, 1471, 1495, 1852
HpyCH4IV ACGT 4 cut(s) 412, 520, 750, 873
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 138, 358, 821, 968, 1463, 1568, 1697, 1706
HpyF3I CTNAG 6 cut(s) 21, 150, 191, 394, 606, 1118
HpySE526I ACGT 4 cut(s) 412, 520, 750, 873
HspAI GCGC 1 cut(s) 1262
Ksp22I TGATCA 1 cut(s) 772
Kzo9I GATC 4 cut(s) 772, 1108, 1528, 1891
LmnI GCTCC 1 cut(s) 1906
LweI GCATC 3 cut(s) 175, 321, 619
MaeI CTAG 4 cut(s) 572, 794, 812, 1265
MaeII ACGT 4 cut(s) 412, 520, 750, 873
MaeIII GTNAC 6 cut(s) 461, 521, 869, 902, 1403, 1471
MalI GATC 4 cut(s) 774, 1110, 1530, 1893
MbiI CCGCTC 2 cut(s) 375, 1882
MboI GATC 4 cut(s) 772, 1108, 1528, 1891
MboII GAAGA 9 cut(s) 203, 528, 611, 612, 798, 1103, 1315, 1752, 1798
MfeI CAATTG 1 cut(s) 879
MflI RGATCY 1 cut(s) 1108
MhlI GDGCHC 3 cut(s) 1286, 1702, 1794
MluCI AATT 8 cut(s) 299, 677, 879, 930, 1025, 1065, 1173, 1205
MlyI GAGTC 5 cut(s) 220, 299, 1305, 1421, 1594
MmeI TCCRAC 3 cut(s) 62, 254, 406
MseI TTAA 6 cut(s) 134, 336, 564, 737, 1133, 1927
MslI CAYNNNNRTG 4 cut(s) 411, 573, 981, 1875
MspA1I CMGCKG 3 cut(s) 20, 349, 758
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 2 cut(s) 1526, 1731
MspR9I CCNGG 2 cut(s) 1500, 1662
MunI CAATTG 1 cut(s) 879
Mva1269I GAATGC 2 cut(s) 1238, 1721
MvaI CCWGG 2 cut(s) 1500, 1662
MvnI CGCG 1 cut(s) 1262
MwoI GCNNNNNNNGC 9 cut(s) 53, 138, 358, 821, 968, 1463, 1568, 1697, 1706
NcoI CCATGG 1 cut(s) 1112
NdeI CATATG 1 cut(s) 1738
NdeII GATC 4 cut(s) 772, 1108, 1528, 1891
NheI GCTAGC 1 cut(s) 811
NlaIV GGNNCC 3 cut(s) 101, 727, 1700
NmeAIII GCCGAG 2 cut(s) 340, 1773
NmuCI GTSAC 4 cut(s) 461, 869, 902, 1403
NspI RCATGY 1 cut(s) 980
NspV TTCGAA 2 cut(s) 1023, 1102
OliI CACNNNNGTG 1 cut(s) 411
PaeR7I CTCGAG 1 cut(s) 467
PagI TCATGA 1 cut(s) 1620
PaqCI CACCTGC 1 cut(s) 710
PcsI WCGNNNNNNNCGW 1 cut(s) 1292
PctI GAATGC 2 cut(s) 1238, 1721
PfeI GAWTC 5 cut(s) 4, 14, 1145, 1217, 1436
PflFI GACNNNGTC 2 cut(s) 289, 1603
PinAI ACCGGT 1 cut(s) 1730
PleI GAGTC 5 cut(s) 220, 298, 1305, 1420, 1594
PpsI GAGTC 5 cut(s) 220, 298, 1305, 1420, 1594
PpuMI RGGWCCY 1 cut(s) 725
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 2 cut(s) 1498, 1660
PspEI GGTNACC 1 cut(s) 461
PspGI CCWGG 2 cut(s) 1498, 1660
PspN4I GGNNCC 3 cut(s) 101, 727, 1700
PspOMI GGGCCC 1 cut(s) 1698
PspPI GGNCC 4 cut(s) 725, 1523, 1698, 1699
PspPPI RGGWCCY 1 cut(s) 725
PspXI VCTCGAGB 1 cut(s) 467
PstI CTGCAG 1 cut(s) 862
PsuI RGATCY 1 cut(s) 1108
PsyI GACNNNGTC 2 cut(s) 289, 1603
PvuII CAGCTG 2 cut(s) 20, 758
RsaI GTAC 3 cut(s) 617, 987, 1803
RsaNI GTAC 3 cut(s) 616, 986, 1802
RseI CAYNNNNRTG 4 cut(s) 411, 573, 981, 1875
SaqAI TTAA 6 cut(s) 134, 336, 564, 737, 1133, 1927
Sau3AI GATC 4 cut(s) 772, 1108, 1528, 1891
Sau96I GGNCC 4 cut(s) 725, 1523, 1698, 1699
SchI GAGTC 5 cut(s) 220, 299, 1305, 1421, 1594
ScrFI CCNGG 2 cut(s) 1500, 1662
SduI GDGCHC 3 cut(s) 1286, 1702, 1794
SfaNI GCATC 3 cut(s) 175, 321, 619
SfcI CTRYAG 1 cut(s) 858
Sfr274I CTCGAG 1 cut(s) 467
SfuI TTCGAA 2 cut(s) 1023, 1102
SinI GGWCC 1 cut(s) 725
SlaI CTCGAG 1 cut(s) 467
SmiMI CAYNNNNRTG 4 cut(s) 411, 573, 981, 1875
SmlI CTYRAG 2 cut(s) 133, 467
SmoI CTYRAG 2 cut(s) 133, 467
Sse9I AATT 8 cut(s) 299, 677, 879, 930, 1025, 1065, 1173, 1205
SspI AATATT 1 cut(s) 181
SspMI CTAG 4 cut(s) 572, 794, 812, 1265
StyD4I CCNGG 2 cut(s) 1498, 1660
StyI CCWWGG 2 cut(s) 721, 1112
TaaI ACNGT 7 cut(s) 244, 385, 767, 1019, 1471, 1495, 1852
TaiI ACGT 4 cut(s) 415, 523, 753, 876
TaqI TCGA 5 cut(s) 468, 696, 1023, 1102, 1220
TasI AATT 8 cut(s) 299, 677, 879, 930, 1025, 1065, 1173, 1205
TatI WGTACW 2 cut(s) 615, 985
TauI GCSGC 4 cut(s) 141, 167, 352, 401
TfiI GAWTC 5 cut(s) 4, 14, 1145, 1217, 1436
Tru1I TTAA 6 cut(s) 134, 336, 564, 737, 1133, 1927
Tru9I TTAA 6 cut(s) 134, 336, 564, 737, 1133, 1927
TscAI CASTG 5 cut(s) 280, 561, 919, 1219, 1498
TseFI GTSAC 4 cut(s) 461, 869, 902, 1403
Tsp45I GTSAC 4 cut(s) 461, 869, 902, 1403
TspDTI ATGAA 4 cut(s) 17, 1656, 1725, 1752
TspGWI ACGGA 4 cut(s) 41, 423, 1284, 1844
TspRI CASTG 5 cut(s) 280, 561, 919, 1219, 1498
Tth111I GACNNNGTC 2 cut(s) 289, 1603
Vha464I CTTAAG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 725
XapI RAATTY 1 cut(s) 1205
XbaI TCTAGA 1 cut(s) 571
XceI RCATGY 1 cut(s) 980
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XhoI CTCGAG 1 cut(s) 467
XmiI GTMKAC 2 cut(s) 648, 1309
XspI CTAG 4 cut(s) 572, 794, 812, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.