Rh6CG172700

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000489
Physical Location & Seq
Forward (+)
24069406 .. 24071776
2371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG172700.1

Sequence Viewer

Length: 1875 bp
ATGAATCCCTCCAATTTGTGCGAGACCGATAGTACCCAAACGACATCGGTGGAGACCAAGGCGCCTTCTGATTCTGGTTTGAACCTGGAGGTATCTGCGACAGACAACTCAATATGTTTAAGTGGAATGGATTTTGATGTGTTCATAGCCGCACGAGAAGGTAATGTTGCTTCCCTTAGAGAACATGGAGAGAGTCTTCAACACAAGTTGACTCCAACAAAAAACACAGTCCTCCATATTTATATAGCATGCGTAGGCAGTGTGACATTGGCAAAATCTGAAAAAGTGTTGAAGCCGACAAAAATCGTGGAGGAGATCGTCCAAATGTGTGCGCCGCTACTATTGCAGCCCAACGAGAGTGGAGACACTCCGTTACACTTTGCGGCGAGACACGGGCATACTGACATAGTGGAAACTCTCATTCAAGCTTCAAAAGCTCGTGGATCCAGTGACCTCGAGAAAGGTGTTTCGACAGAGGAAAATTGCTGGCAGGCGCTCATAAGAACAAGCAACAAGGAGAAGAACACTGCATTGCACGAAGCTGTGCGCTTTAATTACCTCAGTGTGGTGAAGGTACTGATCAAAGAAGACCCTGAATTCTTGTATAGTGCGAATGATGATGGCGAGACTCCGGTTTACATGGCTGTCGAGAGGGGTTATCGTGAGCTGGTTATTGAAATGCTAGACAATTGCACGAATCCAGCTTACCAAGGCCCCAATGGTTTGACGGCTTTGCACGCTGCAGCTATCTCCAATGATGAACAAATGACGAAAAAACTTCTACAGACCAAAGGGGCTTTAACAAGAGCAGCAAACGAACGAGGACAGACTCCGCTTCACTCGGCTGCAGGTTGGGGTCACGCTGCAATTGTGAAACAAATACTAGAATATGATAAATCCACCGCCTATATTTGTGACAAGAGAAAGAGGGCACCTTTTCATTATGCGTGTTATAGAGGCAGTATAGATTTATTGAACGAGCTTGTGTCTCGTTGCCCTGATTGTTGCGAATTTGTTGATGAGCATGGTCGGAATGGTCTTCACCATGCCATTGAGGGTAACAATCATCAAGTAGAAAACTTTATTCGGAAAGATCCGTGGCTTAGCAGTGTCCTTTTAAACGGGAAAGATGCTAAGGGGAACACACCTCTCCATCAAATTGCTACCTCACTCTATCGAGGCGTGGATTTCATAAGCGACTCTAGAGTTGATAAGATGGCATTCAACCAAAGCAATCTAAATGCTTTAGACATCCTTAAAAACAGTGATACTTCTTTAAGCGAGAAGATAGATCTTATCAAGCAGTTGACAAAGACCGGTGCAAGAAGATATTGTCGTCTTCAAAACAACGAAAATGTTCCCAAAACCTCTATGGTAGAGGAAATAAAAGAAGCCCATTTCATAGTGTCAACACTCATAGCAACTGTAACCTTTGCAGCGGGTTTTACCGTGCCTGGCGGTTACCAAAGTGAAAAGGGACGGGATCAGGGTTTTGCAGTGCTAACAAGAAATGTAGCTTTCCAAGCATTTGTCATAACCAATACAATAGCTATGTGTATGTCCAGTTGTGCTGTCATGATTCGCATTGTTTTGGCGTTGCGAAGAAGGGAGGAGTATGGTTCCTTTCATGCGGCGATAAATCTGACATTGTACGCCTTAATTGCAATGGTGATAGCATTTATTACCGGCACATATGCAGTTTTAGGTCATTCACCAGAACTTGCTATAGCCGCATGTGTAATTGGTTGCCTTTTGTCCTTTGTGTTTGGTTTTGTTATGCTTTCTCCCACTATGCGTACTTGCCGTATGCATTTCTTTAAAGCGCATGACCGCATTTTCAACGGGTTATACTTGTACAAAATGATGGGTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

624

Amino Acids

68.92

Weight (kDa)

6.6

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 49 - 143 1.5e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 111 - 141 3e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 115 - 196 3.2e-11 Ankyrin repeats (3 copies)
Ank PF00023 121 - 143 1.7e-06 Ankyrin repeat
Ank_2 PF12796 164 - 230 8.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 230 - 298 1.3e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 245 - 292 1.5e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 313 - 398 6.6e-06 Ankyrin repeats (3 copies)
PGG PF13962 459 - 567 7.3e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 839
AccB1I GGYRCC 2 cut(s) 61, 931
AclWI GGATC 4 cut(s) 438, 451, 1088, 1491
AcsI RAATTY 2 cut(s) 596, 1010
AcyI GRCGYC 1 cut(s) 62
AfaI GTAC 6 cut(s) 34, 576, 1652, 1798, 1856, 1870
AfiI CCNNNNNNNGG 1 cut(s) 565
AgeI ACCGGT 1 cut(s) 1316
AjnI CCWGG 2 cut(s) 84, 1453
AluBI AGCT 9 cut(s) 428, 437, 542, 667, 704, 746, 982, 1517, 1550
AluI AGCT 9 cut(s) 428, 437, 542, 667, 704, 746, 982, 1517, 1550
Alw26I GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
AlwI GGATC 4 cut(s) 438, 451, 1088, 1491
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 1 cut(s) 712
ApeKI GCWGC 7 cut(s) 346, 740, 743, 809, 845, 863, 1436
ApoI RAATTY 2 cut(s) 596, 1010
AsiGI ACCGGT 1 cut(s) 1316
Asp700I GAANNNNTTC 1 cut(s) 1356
AspLEI GCGC 5 cut(s) 64, 334, 496, 549, 1825
AspS9I GGNCC 1 cut(s) 713
AsuHPI GGTGA 4 cut(s) 580, 1034, 1681, 1704
AvaI CYCGRG 1 cut(s) 455
BaeGI GKGCMC 1 cut(s) 934
BamHI GGATCC 1 cut(s) 443
BanI GGYRCC 2 cut(s) 61, 931
BarI GAAGNNNNNNTAC 2 cut(s) 154, 186
BauI CACGAG 2 cut(s) 153, 438
BbsI GAAGAC 4 cut(s) 188, 594, 1031, 1331
BbvI GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
BccI CCATC 4 cut(s) 614, 1161, 1210, 1858
BceAI ACGGC 2 cut(s) 744, 1788
BciT130I CCWGG 2 cut(s) 86, 1455
BclI TGATCA 1 cut(s) 579
BcoDI GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
BfaI CTAG 3 cut(s) 683, 884, 1203
BfmI CTRYAG 4 cut(s) 741, 782, 846, 1725
BfoI RGCGCY 2 cut(s) 65, 497
BfuAI ACCTGC 1 cut(s) 839
BglII AGATCT 1 cut(s) 1291
BlpI GCTNAGC 1 cut(s) 1103
Bme1390I CCNGG 2 cut(s) 86, 1455
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 1 cut(s) 713
BmiI GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
BmrFI CCNGG 2 cut(s) 86, 1455
BmsI GCATC 1 cut(s) 1120
BpiI GAAGAC 4 cut(s) 188, 594, 1031, 1331
BpmI CTGGAG 1 cut(s) 107
Bpu10I CCTNAGC 1 cut(s) 1134
Bpu1102I GCTNAGC 1 cut(s) 1103
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 2 cut(s) 17, 47
BsaJI CCNNGG 3 cut(s) 57, 709, 1097
BsaWI WCCGGW 2 cut(s) 631, 1316
Bsc4I CCNNNNNNNGG 1 cut(s) 565
Bse118I RCCGGY 2 cut(s) 1316, 1685
Bse1I ACTGG 2 cut(s) 447, 1563
Bse3DI GCAATG 2 cut(s) 530, 1671
BseBI CCWGG 2 cut(s) 86, 1455
BseDI CCNNGG 3 cut(s) 57, 709, 1097
BseGI GGATG 1 cut(s) 1251
BseLI CCNNNNNNNGG 1 cut(s) 565
BseMI GCAATG 2 cut(s) 530, 1671
BseMII CTCAG 1 cut(s) 574
BseNI ACTGG 2 cut(s) 447, 1563
BseRI GAGGAG 2 cut(s) 326, 1625
BseSI GKGCMC 1 cut(s) 934
BseXI GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
BshFI GGCC 1 cut(s) 714
BshNI GGYRCC 2 cut(s) 61, 931
BshTI ACCGGT 1 cut(s) 1316
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 3 cut(s) 632, 1317, 1686
BslFI GGGAC 1 cut(s) 1491
BslI CCNNNNNNNGG 1 cut(s) 565
BsmAI GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
BsmFI GGGAC 1 cut(s) 1491
BsmI GAATGC 1 cut(s) 1220
BsnI GGCC 1 cut(s) 714
Bso31I GGTCTC 2 cut(s) 17, 47
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 934
Bsp1407I TGTACA 1 cut(s) 1854
Bsp143I GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
Bsp1720I GCTNAGC 1 cut(s) 1103
BspANI GGCC 1 cut(s) 714
BspCNI CTCAG 1 cut(s) 573
BspHI TCATGA 1 cut(s) 1575
BspLI GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
BspMAI CTGCAG 2 cut(s) 745, 850
BspMI ACCTGC 1 cut(s) 839
BspPI GGATC 4 cut(s) 438, 451, 1088, 1491
BspT107I GGYRCC 2 cut(s) 61, 931
BspTNI GGTCTC 2 cut(s) 17, 47
BsrDI GCAATG 2 cut(s) 530, 1671
BsrFI RCCGGY 2 cut(s) 1316, 1685
BsrGI TGTACA 1 cut(s) 1854
BsrI ACTGG 2 cut(s) 447, 1563
BssAI RCCGGY 2 cut(s) 1316, 1685
BssECI CCNNGG 3 cut(s) 57, 709, 1097
BssMI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
BssNI GRCGYC 1 cut(s) 62
BssSI CACGAG 2 cut(s) 153, 438
BssT1I CCWWGG 2 cut(s) 57, 709
Bst2BI CACGAG 2 cut(s) 153, 438
Bst2UI CCWGG 2 cut(s) 86, 1455
Bst4CI ACNGT 4 cut(s) 229, 1265, 1426, 1450
BstACI GRCGYC 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 1854
BstC8I GCNNGC 4 cut(s) 250, 488, 492, 738
BstDEI CTNAG 5 cut(s) 176, 560, 1103, 1134, 1872
BstDSI CCRYGG 1 cut(s) 1097
BstEII GGTNACC 1 cut(s) 1460
BstF5I GGATG 1 cut(s) 1251
BstH2I RGCGCY 2 cut(s) 65, 497
BstHHI GCGC 5 cut(s) 64, 334, 496, 549, 1825
BstKTI GATC 6 cut(s) 318, 446, 582, 1096, 1294, 1486
BstMAI GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
BstMBI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
BstMWI GCNNNNNNNGC 6 cut(s) 343, 434, 737, 1523, 1661, 1730
BstNI CCWGG 2 cut(s) 86, 1455
BstNSI RCATGY 2 cut(s) 252, 1737
BstPI GGTNACC 1 cut(s) 1460
BstSCI CCNGG 2 cut(s) 84, 1453
BstSFI CTRYAG 4 cut(s) 741, 782, 846, 1725
BstSLI GKGCMC 1 cut(s) 934
BstV1I GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
BstV2I GAAGAC 4 cut(s) 188, 594, 1031, 1331
BstX2I RGATCY 3 cut(s) 443, 1093, 1291
BstYI RGATCY 3 cut(s) 443, 1093, 1291
BsuRI GGCC 1 cut(s) 714
BtgI CCRYGG 1 cut(s) 1097
BtsCI GGATG 1 cut(s) 1251
BtsI GCAGTG 4 cut(s) 265, 525, 1114, 1503
BtsIMutI CAGTG 7 cut(s) 265, 454, 525, 568, 1114, 1270, 1503
BveI ACCTGC 1 cut(s) 839
Cac8I GCNNGC 4 cut(s) 250, 488, 492, 738
CciI TCATGA 1 cut(s) 1575
CfoI GCGC 5 cut(s) 64, 334, 496, 549, 1825
Cfr10I RCCGGY 2 cut(s) 1316, 1685
Cfr13I GGNCC 1 cut(s) 713
Csp6I GTAC 6 cut(s) 33, 575, 1651, 1797, 1855, 1869
CspAI ACCGGT 1 cut(s) 1316
CspCI CAANNNNNGTGG 4 cut(s) 288, 323, 340, 375
CviAII CATG 9 cut(s) 185, 249, 640, 1025, 1046, 1576, 1628, 1734, 1826
CviQI GTAC 6 cut(s) 33, 575, 1651, 1797, 1855, 1869
DdeI CTNAG 5 cut(s) 176, 560, 1103, 1134, 1872
DinI GGCGCC 1 cut(s) 63
DpnI GATC 6 cut(s) 317, 445, 581, 1095, 1293, 1485
DpnII GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
DraI TTTAAA 2 cut(s) 1119, 1819
Eco130I CCWWGG 2 cut(s) 57, 709
Eco31I GGTCTC 2 cut(s) 17, 47
Eco88I CYCGRG 1 cut(s) 455
Eco91I GGTNACC 1 cut(s) 1460
EcoO109I RGGNCCY 1 cut(s) 713
EcoO65I GGTNACC 1 cut(s) 1460
EcoRI GAATTC 1 cut(s) 596
EcoRII CCWGG 2 cut(s) 84, 1453
EcoT14I CCWWGG 2 cut(s) 57, 709
EcoT22I ATGCAT 1 cut(s) 1812
EgeI GGCGCC 1 cut(s) 63
EheI GGCGCC 1 cut(s) 63
ErhI CCWWGG 2 cut(s) 57, 709
FaeI CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
FaqI GGGAC 1 cut(s) 1491
FatI CATG 9 cut(s) 184, 248, 639, 1024, 1045, 1575, 1627, 1733, 1825
FauI CCCGC 1 cut(s) 1432
FauNDI CATATG 1 cut(s) 1693
FbaI TGATCA 1 cut(s) 579
FokI GGATG 1 cut(s) 1238
FspBI CTAG 3 cut(s) 683, 884, 1203
GlaI GCGC 5 cut(s) 63, 333, 495, 548, 1824
GsuI CTGGAG 1 cut(s) 107
HaeII RGCGCY 2 cut(s) 65, 497
HaeIII GGCC 1 cut(s) 714
HapII CCGG 3 cut(s) 632, 1317, 1686
HhaI GCGC 5 cut(s) 64, 334, 496, 549, 1825
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
Hin6I GCGC 5 cut(s) 62, 332, 494, 547, 1823
HinP1I GCGC 5 cut(s) 62, 332, 494, 547, 1823
HincII GTYRAC 3 cut(s) 210, 1308, 1410
HindII GTYRAC 3 cut(s) 210, 1308, 1410
HindIII AAGCTT 1 cut(s) 426
HinfI GANTC 9 cut(s) 4, 71, 193, 211, 628, 697, 829, 1199, 1579
HpaII CCGG 3 cut(s) 632, 1317, 1686
HphI GGTGA 4 cut(s) 580, 1034, 1681, 1704
Hpy166II GTNNAC 4 cut(s) 210, 637, 1308, 1410
Hpy188I TCNGA 5 cut(s) 70, 280, 1032, 1089, 1644
Hpy188III TCNNGA 5 cut(s) 457, 649, 662, 1203, 1576
Hpy8I GTNNAC 4 cut(s) 210, 637, 1308, 1410
HpyAV CCTTC 4 cut(s) 75, 152, 565, 1599
HpyCH4III ACNGT 4 cut(s) 229, 1265, 1426, 1450
HpyF10VI GCNNNNNNNGC 6 cut(s) 343, 434, 737, 1523, 1661, 1730
HpyF3I CTNAG 5 cut(s) 176, 560, 1103, 1134, 1872
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
HspAI GCGC 5 cut(s) 62, 332, 494, 547, 1823
KasI GGCGCC 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 579
Kzo9I GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
Lsp1109I GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
LweI GCATC 1 cut(s) 1120
MaeI CTAG 3 cut(s) 683, 884, 1203
MaeIII GTNAC 8 cut(s) 262, 372, 449, 857, 914, 1058, 1426, 1460
MalI GATC 6 cut(s) 317, 445, 581, 1095, 1293, 1485
MboI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
MboII GAAGA 8 cut(s) 188, 532, 599, 1031, 1297, 1331, 1338, 1614
MfeI CAATTG 2 cut(s) 688, 867
MflI RGATCY 3 cut(s) 443, 1093, 1291
MhlI GDGCHC 1 cut(s) 934
Mly113I GGCGCC 1 cut(s) 62
MlyI GAGTC 5 cut(s) 202, 205, 622, 823, 1193
MmeI TCCRAC 2 cut(s) 239, 1010
Mph1103I ATGCAT 1 cut(s) 1812
MroXI GAANNNNTTC 1 cut(s) 1356
MseI TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
MspA1I CMGCKG 1 cut(s) 1439
MspI CCGG 3 cut(s) 632, 1317, 1686
MspR9I CCNGG 2 cut(s) 86, 1455
MunI CAATTG 2 cut(s) 688, 867
Mva1269I GAATGC 1 cut(s) 1220
MvaI CCWGG 2 cut(s) 86, 1455
MwoI GCNNNNNNNGC 6 cut(s) 343, 434, 737, 1523, 1661, 1730
NarI GGCGCC 1 cut(s) 62
NdeI CATATG 1 cut(s) 1693
NdeII GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
NlaIII CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
NlaIV GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 4 cut(s) 262, 449, 857, 914
NsiI ATGCAT 1 cut(s) 1812
NspI RCATGY 2 cut(s) 252, 1737
PaeI GCATGC 1 cut(s) 252
PaeR7I CTCGAG 1 cut(s) 455
PagI TCATGA 1 cut(s) 1575
PctI GAATGC 1 cut(s) 1220
PdmI GAANNNNTTC 1 cut(s) 1356
PfeI GAWTC 4 cut(s) 4, 71, 697, 1579
PinAI ACCGGT 1 cut(s) 1316
PleI GAGTC 5 cut(s) 201, 205, 622, 823, 1193
PluTI GGCGCC 1 cut(s) 65
PpsI GAGTC 5 cut(s) 201, 205, 622, 823, 1193
Psp6I CCWGG 2 cut(s) 84, 1453
PspEI GGTNACC 1 cut(s) 1460
PspGI CCWGG 2 cut(s) 84, 1453
PspN4I GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
PspPI GGNCC 1 cut(s) 713
PstI CTGCAG 2 cut(s) 745, 850
PsuI RGATCY 3 cut(s) 443, 1093, 1291
RsaI GTAC 6 cut(s) 34, 576, 1652, 1798, 1856, 1870
RsaNI GTAC 6 cut(s) 33, 575, 1651, 1797, 1855, 1869
SaqAI TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
Sau3AI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
Sau96I GGNCC 1 cut(s) 713
SchI GAGTC 5 cut(s) 202, 205, 622, 823, 1193
ScrFI CCNGG 2 cut(s) 86, 1455
SduI GDGCHC 1 cut(s) 934
SfaNI GCATC 1 cut(s) 1120
SfcI CTRYAG 4 cut(s) 741, 782, 846, 1725
SfoI GGCGCC 1 cut(s) 63
Sfr274I CTCGAG 1 cut(s) 455
SlaI CTCGAG 1 cut(s) 455
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
SphI GCATGC 1 cut(s) 252
SspDI GGCGCC 1 cut(s) 61
SspMI CTAG 3 cut(s) 683, 884, 1203
StyD4I CCNGG 2 cut(s) 84, 1453
StyI CCWWGG 2 cut(s) 57, 709
TaaI ACNGT 4 cut(s) 229, 1265, 1426, 1450
TaqI TCGA 4 cut(s) 456, 470, 648, 1177
TaqII GACCGA 1 cut(s) 41
TatI WGTACW 1 cut(s) 1854
TauI GCSGC 5 cut(s) 152, 337, 386, 1634, 1733
TfiI GAWTC 4 cut(s) 4, 71, 697, 1579
Tru1I TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
Tru9I TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
TscAI CASTG 7 cut(s) 265, 454, 532, 568, 1114, 1270, 1503
TseFI GTSAC 4 cut(s) 262, 449, 857, 914
TseI GCWGC 7 cut(s) 346, 740, 743, 809, 845, 863, 1436
Tsp45I GTSAC 4 cut(s) 262, 449, 857, 914
TspDTI ATGAA 7 cut(s) 17, 133, 774, 929, 1180, 1390, 1616
TspGWI ACGGA 2 cut(s) 360, 1086
TspRI CASTG 7 cut(s) 265, 454, 532, 568, 1114, 1270, 1503
XapI RAATTY 2 cut(s) 596, 1010
XbaI TCTAGA 1 cut(s) 1202
XceI RCATGY 2 cut(s) 252, 1737
XcmI CCANNNNNNNNNTGG 2 cut(s) 716, 1369
XhoI CTCGAG 1 cut(s) 455
XmnI GAANNNNTTC 1 cut(s) 1356
XspI CTAG 3 cut(s) 683, 884, 1203
Zsp2I ATGCAT 1 cut(s) 1812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.