Rh6DG163900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000489
Physical Location & Seq
Forward (+)
25172917 .. 25175246
2330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG163900.1

Sequence Viewer

Length: 1875 bp
ATGAATCCCTCCAATTTGTGCGAGACCGATAGTACCCAAACGACATCGGTGGAGACCAAGGCGCCTTCTGATTCTGGTTTGAACCTGGAGGTATCTGCGACAGACAACTCAATATGTTTAAGTGGAATGGATTTTGATGTGTTCATAGCCGCACGAGAAGGTAATGTTGCTTCCCTTAGAGAACATGGAGAGAGTCTTCAACACAAGTTGACTCCAACAAAAAACACAGTCCTCCATATTTATATAGCATGCGTAGGCAGTGTGACATTGGCAAAATCTGAAAAAGTGTTGAAGCCGACAAAAATCGTGGAGGAGATCGTCCAAATGTGTGCGCCGCTACTATTGCAGCCCAACGAGAGTGGAGACACTCCGTTACACTTTGCGGCGAGACACGGGCATACTGACATAGTGGAAACTCTCATTCAAGCTTCAAAAGCTCGTGGATCCAGTGACCTCGAGAAAGGTGTTTCGACAGAGGAAAATTGCTGGCAGGCGCTCATAAGAACAAGCAACAAGGAGAAGAACACTGCATTGCACGAAGCTGTGCGCTTTAATTACCTCAGTGTGGTGAAGGTACTGATCAAAGAAGACCCTGAATTCTTGTATAGTGCGAATGATGATGGCGAGACTCCGGTTTACATGGCTGTCGAGAGGGGTTATCGTGAGCTGGTTATTGAAATGCTAGACAATTGCACGAATCCAGCTTACCAAGGCCCCAATGGTTTGACGGCTTTGCACGCTGCAGCTATCTCCAATGATGAACAAATGACGAAAAAACTTCTACAGACCAAAGGGGCTTTAACAAGAGCAGCAAACGAACGAGGACAGACTCCGCTTCACTCGGCTGCAGGTTGGGGTCACGCTGCAATTGTGAAACAAATACTAGAATATGATAAATCCACCGCCTATATTTGTGACAAGAGAAAGAGGGCACCTTTTCATTATGCGTGTTATAGAGGCAGTATAGATTTATTGAACGAGCTTGTGTCTCGTTGCCCTGATTGTTGCGAATTTGTTGATGAGCATGGTCGGAATGGTCTTCACCATGCCATTGAGGGTAACAATCATCAAGTAGAAAACTTTATTCGGAAAGATCCGTGGCTTAGCAGTGTCCTTTTAAACGGGAAAGATGCTAAGGGGAACACACCTCTCCATCAAATTGCTACCTCACTCTATCGAGGCGTGGATTTCATAAGCGACTCTAGAGTTGATAAGATGGCATTCAACCAAAGCAATCTAAATGCTTTAGACATCCTTAAAAACAGTGATACTTCTTTAAGCGAGAAGATAGATCTTATCAAGCAGTTGACAAAGACCGGTGCAAGAAGATATTGTCGTCTTCAAAACAACGAAAATGTTCCCAAAACCTCTATGGTAGAGGAAATAAAAGAAGCCCATTTCATAGTGTCAACACTCATAGCAACTGTAACCTTTGCAGCGGGTTTTACCGTGCCTGGCGGTTACCAAAGTGAAAAGGGACGGGATCAGGGTTTTGCAGTGCTAACAAGAAATGTAGCTTTCCAAGCATTTGTCATAACCAATACAATAGCTATGTGTATGTCCAGTTGTGCTGTCATGATTCGCATTGTTTTGGCGTTGCGAAGAAGGGAGGAGTATGGTTCCTTTCATGCGGCGATAAATCTGACATTGTACGCCTTAATTGCAATGGTGATAGCATTTATTACCGGCACATATGCAGTTTTAGGTCATTCACCAGAACTTGCTATAGCCGCATGTGTAATTGGTTGCCTTTTGTCCTTTGTGTTTGGTTTTGTTATGCTTTCTCCCACTATGCGTACTTGCCGTATGCATTTCTTTAAAGCGCATGACCGCATTTTCAACGGGTTATACTTGTACAAAATGATGGGTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

624

Amino Acids

68.92

Weight (kDa)

6.6

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 49 - 143 1.5e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 111 - 141 3e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 115 - 196 3.2e-11 Ankyrin repeats (3 copies)
Ank PF00023 121 - 143 1.7e-06 Ankyrin repeat
Ank_2 PF12796 164 - 230 8.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 230 - 298 1.3e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 245 - 292 1.5e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 313 - 398 6.6e-06 Ankyrin repeats (3 copies)
PGG PF13962 459 - 567 7.3e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 839
AccB1I GGYRCC 2 cut(s) 61, 931
AclWI GGATC 4 cut(s) 438, 451, 1088, 1491
AcsI RAATTY 2 cut(s) 596, 1010
AcyI GRCGYC 1 cut(s) 62
AfaI GTAC 6 cut(s) 34, 576, 1652, 1798, 1856, 1870
AfiI CCNNNNNNNGG 1 cut(s) 565
AgeI ACCGGT 1 cut(s) 1316
AjnI CCWGG 2 cut(s) 84, 1453
AluBI AGCT 9 cut(s) 428, 437, 542, 667, 704, 746, 982, 1517, 1550
AluI AGCT 9 cut(s) 428, 437, 542, 667, 704, 746, 982, 1517, 1550
Alw26I GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
AlwI GGATC 4 cut(s) 438, 451, 1088, 1491
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 1 cut(s) 712
ApeKI GCWGC 7 cut(s) 346, 740, 743, 809, 845, 863, 1436
ApoI RAATTY 2 cut(s) 596, 1010
AsiGI ACCGGT 1 cut(s) 1316
Asp700I GAANNNNTTC 1 cut(s) 1356
AspLEI GCGC 5 cut(s) 64, 334, 496, 549, 1825
AspS9I GGNCC 1 cut(s) 713
AsuHPI GGTGA 4 cut(s) 580, 1034, 1681, 1704
AvaI CYCGRG 1 cut(s) 455
BaeGI GKGCMC 1 cut(s) 934
BamHI GGATCC 1 cut(s) 443
BanI GGYRCC 2 cut(s) 61, 931
BarI GAAGNNNNNNTAC 2 cut(s) 154, 186
BauI CACGAG 2 cut(s) 153, 438
BbsI GAAGAC 4 cut(s) 188, 594, 1031, 1331
BbvI GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
BccI CCATC 4 cut(s) 614, 1161, 1210, 1858
BceAI ACGGC 2 cut(s) 744, 1788
BciT130I CCWGG 2 cut(s) 86, 1455
BclI TGATCA 1 cut(s) 579
BcoDI GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
BfaI CTAG 3 cut(s) 683, 884, 1203
BfmI CTRYAG 4 cut(s) 741, 782, 846, 1725
BfoI RGCGCY 2 cut(s) 65, 497
BfuAI ACCTGC 1 cut(s) 839
BglII AGATCT 1 cut(s) 1291
BlpI GCTNAGC 1 cut(s) 1103
Bme1390I CCNGG 2 cut(s) 86, 1455
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 1 cut(s) 713
BmiI GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
BmrFI CCNGG 2 cut(s) 86, 1455
BmsI GCATC 1 cut(s) 1120
BpiI GAAGAC 4 cut(s) 188, 594, 1031, 1331
BpmI CTGGAG 1 cut(s) 107
Bpu10I CCTNAGC 1 cut(s) 1134
Bpu1102I GCTNAGC 1 cut(s) 1103
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 2 cut(s) 17, 47
BsaJI CCNNGG 3 cut(s) 57, 709, 1097
BsaWI WCCGGW 2 cut(s) 631, 1316
Bsc4I CCNNNNNNNGG 1 cut(s) 565
Bse118I RCCGGY 2 cut(s) 1316, 1685
Bse1I ACTGG 2 cut(s) 447, 1563
Bse3DI GCAATG 2 cut(s) 530, 1671
BseBI CCWGG 2 cut(s) 86, 1455
BseDI CCNNGG 3 cut(s) 57, 709, 1097
BseGI GGATG 1 cut(s) 1251
BseLI CCNNNNNNNGG 1 cut(s) 565
BseMI GCAATG 2 cut(s) 530, 1671
BseMII CTCAG 1 cut(s) 574
BseNI ACTGG 2 cut(s) 447, 1563
BseRI GAGGAG 2 cut(s) 326, 1625
BseSI GKGCMC 1 cut(s) 934
BseXI GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
BshFI GGCC 1 cut(s) 714
BshNI GGYRCC 2 cut(s) 61, 931
BshTI ACCGGT 1 cut(s) 1316
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 3 cut(s) 632, 1317, 1686
BslFI GGGAC 1 cut(s) 1491
BslI CCNNNNNNNGG 1 cut(s) 565
BsmAI GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
BsmFI GGGAC 1 cut(s) 1491
BsmI GAATGC 1 cut(s) 1220
BsnI GGCC 1 cut(s) 714
Bso31I GGTCTC 2 cut(s) 17, 47
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 934
Bsp1407I TGTACA 1 cut(s) 1854
Bsp143I GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
Bsp1720I GCTNAGC 1 cut(s) 1103
BspANI GGCC 1 cut(s) 714
BspCNI CTCAG 1 cut(s) 573
BspHI TCATGA 1 cut(s) 1575
BspLI GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
BspMAI CTGCAG 2 cut(s) 745, 850
BspMI ACCTGC 1 cut(s) 839
BspPI GGATC 4 cut(s) 438, 451, 1088, 1491
BspT107I GGYRCC 2 cut(s) 61, 931
BspTNI GGTCTC 2 cut(s) 17, 47
BsrDI GCAATG 2 cut(s) 530, 1671
BsrFI RCCGGY 2 cut(s) 1316, 1685
BsrGI TGTACA 1 cut(s) 1854
BsrI ACTGG 2 cut(s) 447, 1563
BssAI RCCGGY 2 cut(s) 1316, 1685
BssECI CCNNGG 3 cut(s) 57, 709, 1097
BssMI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
BssNI GRCGYC 1 cut(s) 62
BssSI CACGAG 2 cut(s) 153, 438
BssT1I CCWWGG 2 cut(s) 57, 709
Bst2BI CACGAG 2 cut(s) 153, 438
Bst2UI CCWGG 2 cut(s) 86, 1455
Bst4CI ACNGT 4 cut(s) 229, 1265, 1426, 1450
BstACI GRCGYC 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 1854
BstC8I GCNNGC 4 cut(s) 250, 488, 492, 738
BstDEI CTNAG 5 cut(s) 176, 560, 1103, 1134, 1872
BstDSI CCRYGG 1 cut(s) 1097
BstEII GGTNACC 1 cut(s) 1460
BstF5I GGATG 1 cut(s) 1251
BstH2I RGCGCY 2 cut(s) 65, 497
BstHHI GCGC 5 cut(s) 64, 334, 496, 549, 1825
BstKTI GATC 6 cut(s) 318, 446, 582, 1096, 1294, 1486
BstMAI GTCTC 6 cut(s) 17, 47, 357, 382, 620, 993
BstMBI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
BstMWI GCNNNNNNNGC 6 cut(s) 343, 434, 737, 1523, 1661, 1730
BstNI CCWGG 2 cut(s) 86, 1455
BstNSI RCATGY 2 cut(s) 252, 1737
BstPI GGTNACC 1 cut(s) 1460
BstSCI CCNGG 2 cut(s) 84, 1453
BstSFI CTRYAG 4 cut(s) 741, 782, 846, 1725
BstSLI GKGCMC 1 cut(s) 934
BstV1I GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
BstV2I GAAGAC 4 cut(s) 188, 594, 1031, 1331
BstX2I RGATCY 3 cut(s) 443, 1093, 1291
BstYI RGATCY 3 cut(s) 443, 1093, 1291
BsuRI GGCC 1 cut(s) 714
BtgI CCRYGG 1 cut(s) 1097
BtsCI GGATG 1 cut(s) 1251
BtsI GCAGTG 4 cut(s) 265, 525, 1114, 1503
BtsIMutI CAGTG 7 cut(s) 265, 454, 525, 568, 1114, 1270, 1503
BveI ACCTGC 1 cut(s) 839
Cac8I GCNNGC 4 cut(s) 250, 488, 492, 738
CciI TCATGA 1 cut(s) 1575
CfoI GCGC 5 cut(s) 64, 334, 496, 549, 1825
Cfr10I RCCGGY 2 cut(s) 1316, 1685
Cfr13I GGNCC 1 cut(s) 713
Csp6I GTAC 6 cut(s) 33, 575, 1651, 1797, 1855, 1869
CspAI ACCGGT 1 cut(s) 1316
CspCI CAANNNNNGTGG 4 cut(s) 288, 323, 340, 375
CviAII CATG 9 cut(s) 185, 249, 640, 1025, 1046, 1576, 1628, 1734, 1826
CviQI GTAC 6 cut(s) 33, 575, 1651, 1797, 1855, 1869
DdeI CTNAG 5 cut(s) 176, 560, 1103, 1134, 1872
DinI GGCGCC 1 cut(s) 63
DpnI GATC 6 cut(s) 317, 445, 581, 1095, 1293, 1485
DpnII GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
DraI TTTAAA 2 cut(s) 1119, 1819
Eco130I CCWWGG 2 cut(s) 57, 709
Eco31I GGTCTC 2 cut(s) 17, 47
Eco88I CYCGRG 1 cut(s) 455
Eco91I GGTNACC 1 cut(s) 1460
EcoO109I RGGNCCY 1 cut(s) 713
EcoO65I GGTNACC 1 cut(s) 1460
EcoRI GAATTC 1 cut(s) 596
EcoRII CCWGG 2 cut(s) 84, 1453
EcoT14I CCWWGG 2 cut(s) 57, 709
EcoT22I ATGCAT 1 cut(s) 1812
EgeI GGCGCC 1 cut(s) 63
EheI GGCGCC 1 cut(s) 63
ErhI CCWWGG 2 cut(s) 57, 709
FaeI CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
FaqI GGGAC 1 cut(s) 1491
FatI CATG 9 cut(s) 184, 248, 639, 1024, 1045, 1575, 1627, 1733, 1825
FauI CCCGC 1 cut(s) 1432
FauNDI CATATG 1 cut(s) 1693
FbaI TGATCA 1 cut(s) 579
FokI GGATG 1 cut(s) 1238
FspBI CTAG 3 cut(s) 683, 884, 1203
GlaI GCGC 5 cut(s) 63, 333, 495, 548, 1824
GsuI CTGGAG 1 cut(s) 107
HaeII RGCGCY 2 cut(s) 65, 497
HaeIII GGCC 1 cut(s) 714
HapII CCGG 3 cut(s) 632, 1317, 1686
HhaI GCGC 5 cut(s) 64, 334, 496, 549, 1825
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
Hin6I GCGC 5 cut(s) 62, 332, 494, 547, 1823
HinP1I GCGC 5 cut(s) 62, 332, 494, 547, 1823
HincII GTYRAC 3 cut(s) 210, 1308, 1410
HindII GTYRAC 3 cut(s) 210, 1308, 1410
HindIII AAGCTT 1 cut(s) 426
HinfI GANTC 9 cut(s) 4, 71, 193, 211, 628, 697, 829, 1199, 1579
HpaII CCGG 3 cut(s) 632, 1317, 1686
HphI GGTGA 4 cut(s) 580, 1034, 1681, 1704
Hpy166II GTNNAC 4 cut(s) 210, 637, 1308, 1410
Hpy188I TCNGA 5 cut(s) 70, 280, 1032, 1089, 1644
Hpy188III TCNNGA 5 cut(s) 457, 649, 662, 1203, 1576
Hpy8I GTNNAC 4 cut(s) 210, 637, 1308, 1410
HpyAV CCTTC 4 cut(s) 75, 152, 565, 1599
HpyCH4III ACNGT 4 cut(s) 229, 1265, 1426, 1450
HpyF10VI GCNNNNNNNGC 6 cut(s) 343, 434, 737, 1523, 1661, 1730
HpyF3I CTNAG 5 cut(s) 176, 560, 1103, 1134, 1872
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
HspAI GCGC 5 cut(s) 62, 332, 494, 547, 1823
KasI GGCGCC 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 579
Kzo9I GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
Lsp1109I GCAGC 7 cut(s) 358, 727, 755, 821, 832, 850, 1448
LweI GCATC 1 cut(s) 1120
MaeI CTAG 3 cut(s) 683, 884, 1203
MaeIII GTNAC 8 cut(s) 262, 372, 449, 857, 914, 1058, 1426, 1460
MalI GATC 6 cut(s) 317, 445, 581, 1095, 1293, 1485
MboI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
MboII GAAGA 8 cut(s) 188, 532, 599, 1031, 1297, 1331, 1338, 1614
MfeI CAATTG 2 cut(s) 688, 867
MflI RGATCY 3 cut(s) 443, 1093, 1291
MhlI GDGCHC 1 cut(s) 934
Mly113I GGCGCC 1 cut(s) 62
MlyI GAGTC 5 cut(s) 202, 205, 622, 823, 1193
MmeI TCCRAC 2 cut(s) 239, 1010
Mph1103I ATGCAT 1 cut(s) 1812
MroXI GAANNNNTTC 1 cut(s) 1356
MseI TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
MspA1I CMGCKG 1 cut(s) 1439
MspI CCGG 3 cut(s) 632, 1317, 1686
MspR9I CCNGG 2 cut(s) 86, 1455
MunI CAATTG 2 cut(s) 688, 867
Mva1269I GAATGC 1 cut(s) 1220
MvaI CCWGG 2 cut(s) 86, 1455
MwoI GCNNNNNNNGC 6 cut(s) 343, 434, 737, 1523, 1661, 1730
NarI GGCGCC 1 cut(s) 62
NdeI CATATG 1 cut(s) 1693
NdeII GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
NlaIII CATG 9 cut(s) 188, 252, 643, 1028, 1049, 1579, 1631, 1737, 1829
NlaIV GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 4 cut(s) 262, 449, 857, 914
NsiI ATGCAT 1 cut(s) 1812
NspI RCATGY 2 cut(s) 252, 1737
PaeI GCATGC 1 cut(s) 252
PaeR7I CTCGAG 1 cut(s) 455
PagI TCATGA 1 cut(s) 1575
PctI GAATGC 1 cut(s) 1220
PdmI GAANNNNTTC 1 cut(s) 1356
PfeI GAWTC 4 cut(s) 4, 71, 697, 1579
PinAI ACCGGT 1 cut(s) 1316
PleI GAGTC 5 cut(s) 201, 205, 622, 823, 1193
PluTI GGCGCC 1 cut(s) 65
PpsI GAGTC 5 cut(s) 201, 205, 622, 823, 1193
Psp6I CCWGG 2 cut(s) 84, 1453
PspEI GGTNACC 1 cut(s) 1460
PspGI CCWGG 2 cut(s) 84, 1453
PspN4I GGNNCC 5 cut(s) 63, 445, 715, 933, 1621
PspPI GGNCC 1 cut(s) 713
PstI CTGCAG 2 cut(s) 745, 850
PsuI RGATCY 3 cut(s) 443, 1093, 1291
RsaI GTAC 6 cut(s) 34, 576, 1652, 1798, 1856, 1870
RsaNI GTAC 6 cut(s) 33, 575, 1651, 1797, 1855, 1869
SaqAI TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
Sau3AI GATC 6 cut(s) 315, 443, 579, 1093, 1291, 1483
Sau96I GGNCC 1 cut(s) 713
SchI GAGTC 5 cut(s) 202, 205, 622, 823, 1193
ScrFI CCNGG 2 cut(s) 86, 1455
SduI GDGCHC 1 cut(s) 934
SfaNI GCATC 1 cut(s) 1120
SfcI CTRYAG 4 cut(s) 741, 782, 846, 1725
SfoI GGCGCC 1 cut(s) 63
Sfr274I CTCGAG 1 cut(s) 455
SlaI CTCGAG 1 cut(s) 455
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
SphI GCATGC 1 cut(s) 252
SspDI GGCGCC 1 cut(s) 61
SspMI CTAG 3 cut(s) 683, 884, 1203
StyD4I CCNGG 2 cut(s) 84, 1453
StyI CCWWGG 2 cut(s) 57, 709
TaaI ACNGT 4 cut(s) 229, 1265, 1426, 1450
TaqI TCGA 4 cut(s) 456, 470, 648, 1177
TaqII GACCGA 1 cut(s) 41
TatI WGTACW 1 cut(s) 1854
TauI GCSGC 5 cut(s) 152, 337, 386, 1634, 1733
TfiI GAWTC 4 cut(s) 4, 71, 697, 1579
Tru1I TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
Tru9I TTAA 8 cut(s) 119, 552, 800, 1118, 1257, 1277, 1658, 1818
TscAI CASTG 7 cut(s) 265, 454, 532, 568, 1114, 1270, 1503
TseFI GTSAC 4 cut(s) 262, 449, 857, 914
TseI GCWGC 7 cut(s) 346, 740, 743, 809, 845, 863, 1436
Tsp45I GTSAC 4 cut(s) 262, 449, 857, 914
TspDTI ATGAA 7 cut(s) 17, 133, 774, 929, 1180, 1390, 1616
TspGWI ACGGA 2 cut(s) 360, 1086
TspRI CASTG 7 cut(s) 265, 454, 532, 568, 1114, 1270, 1503
XapI RAATTY 2 cut(s) 596, 1010
XbaI TCTAGA 1 cut(s) 1202
XceI RCATGY 2 cut(s) 252, 1737
XcmI CCANNNNNNNNNTGG 2 cut(s) 716, 1369
XhoI CTCGAG 1 cut(s) 455
XmnI GAANNNNTTC 1 cut(s) 1356
XspI CTAG 3 cut(s) 683, 884, 1203
Zsp2I ATGCAT 1 cut(s) 1812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.