pycom02g09080

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000489
Physical Location & Seq
Reverse (-)
6270585 .. 6274295
3711 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g09080.3

Sequence Viewer

Length: 2001 bp
ATGGATACCTCCATTATGGCTGATCAGTCAGAGAGTCCTATTACTCCGTTAGCATCAACCGATGTCGGTGACCAGATCGAGCAAGCAGATCAGAGTCATCAGACCGACATTCAAGAAGCTACAAAATTAGAAGGCAACAATAGTACAGTTTTAATAAGTACCATGGATCGTAATGTTTTCAATGCCGCAAAACAAGGCAATCTGTATATCCTTAAGGAACATGGCGAGAATCTGGACAAAATATTGACTGCAACCAAGAACACAATCCTTCATATCTATACAGCATGCTATAGTTGCCCAACGAACAATGAATCTGAGTATGAGATACTCAAGTCAACAAACACTGTGAAAGGTATCCTTGAAATGTGTCCAGCACTACTATGGCTGCAAAACGAGAGTGGTGATACTGCCCTGCACATTGCGGCAAGATATGGGCGTGCTGGTATAGTTGGAGCTCTCCTCGCAGCTACAGAAACTTATTATCAAGGCGACGTTGAGCAAGGCTCTGCGATCTCATCAGAAGATGCCGTATTGCAGGAGCAAAAACTCATCAGGAAAACCAACAAGAAGAAGGACACAGCGCTGCACGAAGCTGTCCGCTTTAATTACTCTAGGGTGGTGGAGATATTAACTGAAGAAGACCCTAAGTTTTCTTACTCTGCTAACGATGCCGGCGAGACTCCTCTTTACCTAGCTGTCGAGAGGGGATGCAGTGCTTGTTGTGTTGCAATACTTGAAGGTTGCAAAAATCCAACTTATGAAGGCCCAAATGGTAGAACGGCTTTGCACGCTGCGGTTATCCGCAATGATGACGGTAAAGCAGACGAACTAGGATGTATTCCGCTTCACATGGCTGCAGATTTTGGTTACTTTTCAATGGTTGGGCAACTATTGGAATGTGATAAATCTACGGCCTACGTTGCTGACAATAATGGGCGCACAGCTCTTCACCTTGCTGCGTCCGAAGGCCATCTAGATATAATGAAAGAGCTTCTTACTCATTGCCCTGATTGTTGTGAACTGGTCGACAACAAATGTCAGAATGTGCTTCACTATGCCATAGAGAGCGGTCAATATCACGTAGTTGATTTTATGTCAAAAGATCTATGGCTTAGCAACATCCTCTTAAATGCCAAGGATGGAAATGGCAATGCACCTATCCATTACGTTGCTCTTTATCCCATGCTTGCGATGACTAATCTTGTACTTGATGATAAAGTTGATATAATGTCGTTCAACAAGGAAAATTTAAACGCTTTCGACATCATTCTAGCTAACAAGGACAACATGAGCAGAGCACTTCAGCTGGAAAATATAAAAAAAAATTTGCTAGGCAGGTATGGTAGACCAGGTCACAGAGTCAAAAGCCACAACGATGATGGCAATGAAGTGGAGGACGAAAACCAAGGTAGCAGAGACACTGGAGAACGTTTAATGAAGGCAAAAGAAACCCAACTGGTGGTGGCTACACTTATAGCAACGGCAACCTTCGCCGCGGGTTTTACCATGCCCGGTGGTTACCATAGCGAAAGCAGATCGGACCAGGGTTCCCCGATTCTATCAAGAAACATAGCGTTCAAAGCATTTGTTATAACAAATACACTAGCCATGGCCATGTCTAGTTGTTCTGTTCTGGTGCTCCTGTATTCCTCCATTTACACAAAACGAAAGTACACGATCAAAACCTCTCCTACGTTTTACATGGTAGTAAATTTGACAATGTTGGCTTTGATTGCAATGGTGATTGCATTCGTTACCGGCACATACGCAGTACTTGGCGGTCATTCTCCAGGATTAGCCCTTGCAGCTCTTGTGCTTGGCTGCTTTTTCTTCTATTTCTTTGCACATTCCATTCTTTCTTTAGAAAGCAAAAGACTTAAGGCCCCGCATTTCCTGCACCATTTGTATTTAGGCATTGCATTGCTGATATGGTACTCACTTTTTGCGCTGCTTAGATCGATACGATTGAAGCTAAATAACAGGCCCCAGCCGACCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

667

Amino Acids

73.37

Weight (kDa)

5.79

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000489)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10380 FvH4_1g10390 FvH4_1g10400 FvH4_1g10401 FvH4_1g10402 FvH4_1g10430 FvH4_1g10430 FvH4_1g12830 FvH4_1g12830 FvH4_1g12850 FvH4_1g12870
malus_domestica MD02G1014000.v1.1 MD02G1116900.v1.1 MD02G1117100.v1.1 MD07G1083500.v1.1 MD15G1231900.v1.1 MD15G1232000.v1.1 MD15G1232100.v1.1 MD15G1232200.v1.1
prunus_persica Prupe.7G182000_v2.0.a1 Prupe.7G182300_v2.0.a1 Prupe.7G182400_v2.0.a1 Prupe.7G182500_v2.0.a1 Prupe.7G182600_v2.0.a1
pyrus_communis pycom02g09070 pycom02g09080 pycom08g18250 pycom08g18260 pycom08g18270 pycom08g18280 pycom08g18290 pycom15g20630 pycom15g20650 pycom15g20660
rosa_chinensis RchiOBHm_Chr2g0097241 RchiOBHm_Chr7g0213401 RchiOBHm_Chr7g0237491
rosa_laevigata RLG00000000998 RLG00000002808 RLG00000016714
rosa_multiflora Rmu_co8242583.1_g000001 Rmu_sc0002425.1_g000003 Rmu_sc0002425.1_g000009 Rmu_sc0002923.1_g000001 Rmu_sc0036942.1_g000001 Rmu_ssc0000262.1_g000026 Rmu_ssc0000262.1_g000027
rosa_roxburghii Rroxscaffold_2G00144810 Rroxscaffold_2G00144850 Rroxscaffold_3G00224130 Rroxscaffold_3G00245990 Rroxscaffold_6G00396730
rosa_rugosa Rorug02G0054300 Rorug02G0055200 Rorug02G0065700 Rorug05G0283500 Rorug07G0303700
rosa_samantha Rh2AG112200 Rh2AG299500 Rh2BG114800 Rh2CG116800 Rh2CG117000 Rh2DG116000 Rh2DG116200 Rh2DG323600 Rh6AG214000 Rh6CG172700 Rh6DG163900 Rh7AG273800 Rh7AG461200 Rh7BG306800 Rh7BG307200 Rh7BG431000 Rh7BG431300 Rh7CG292900 Rh7CG478400 Rh7DG281200 Rh7DG323600 Rh7DG323700 Rh7DG447700
rosa_wichuraiana Rw0G001860 Rw1G008050 Rw1G011650 Rw2G008760 Rw2G008770 Rw3G028490 Rw6G018710 Rw7G023740 Rw7G038160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1592
Acc36I ACCTGC 1 cut(s) 1326
AccB7I CCANNNNNTGG 1 cut(s) 1459
AccBSI CCGCTC 1 cut(s) 1068
AccI GTMKAC 2 cut(s) 1026, 1345
AccII CGCG 1 cut(s) 1496
AclI AACGTT 1 cut(s) 1429
AclWI GGATC 1 cut(s) 174
AcoI YGGCCR 1 cut(s) 1611
AcsI RAATTY 3 cut(s) 1246, 1324, 1711
AcuI CTGAAG 2 cut(s) 654, 1286
AfaI GTAC 6 cut(s) 145, 160, 1206, 1673, 1773, 1934
AfeI AGCGCT 1 cut(s) 582
AfiI CCNNNNNNNGG 1 cut(s) 1459
AflII CTTAAG 2 cut(s) 212, 1877
AgsI TTSAA 8 cut(s) 113, 181, 362, 737, 876, 1237, 1579, 1969
AjnI CCWGG 3 cut(s) 1348, 1542, 1789
Alw21I GWGCWC 3 cut(s) 457, 1300, 1641
Alw26I GTCTC 2 cut(s) 671, 1410
AlwI GGATC 1 cut(s) 174
Aor51HI AGCGCT 1 cut(s) 582
AoxI GGCC 6 cut(s) 763, 912, 967, 1611, 1881, 1982
ApeKI GCWGC 9 cut(s) 385, 464, 583, 791, 854, 956, 1805, 1821, 1948
ApoI RAATTY 3 cut(s) 1246, 1324, 1711
AspLEI GCGC 3 cut(s) 583, 939, 1948
AspS9I GGNCC 4 cut(s) 764, 1540, 1882, 1983
AsuC2I CCSGG 1 cut(s) 1512
AsuHPI GGTGA 4 cut(s) 80, 413, 941, 1753
AvaII GGWCC 1 cut(s) 1540
BaeI ACNNNNGTAYC 2 cut(s) 317, 350
BalI TGGCCA 1 cut(s) 1613
BanII GRGCYC 1 cut(s) 457
BbsI GAAGAC 1 cut(s) 645
Bbv12I GWGCWC 3 cut(s) 457, 1300, 1641
BbvI GCAGC 9 cut(s) 372, 476, 570, 778, 841, 943, 1808, 1817, 1935
BccI CCATC 3 cut(s) 978, 1133, 1373
BceAI ACGGC 4 cut(s) 512, 795, 927, 1497
BciT130I CCWGG 3 cut(s) 1350, 1544, 1791
BciVI GTATCC 1 cut(s) 365
BclI TGATCA 1 cut(s) 22
BcnI CCSGG 1 cut(s) 1512
BcoDI GTCTC 2 cut(s) 671, 1410
BfaI CTAG 8 cut(s) 612, 692, 830, 974, 1271, 1331, 1604, 1620
BfmI CTRYAG 3 cut(s) 289, 468, 855
BfoI RGCGCY 1 cut(s) 584
BfrI CTTAAG 2 cut(s) 212, 1877
BfuAI ACCTGC 1 cut(s) 1326
BfuI GTATCC 1 cut(s) 365
BglII AGATCT 1 cut(s) 1102
BlpI GCTNAGC 1 cut(s) 1112
BmcAI AGTACT 1 cut(s) 1773
Bme1390I CCNGG 4 cut(s) 1350, 1512, 1544, 1791
Bme18I GGWCC 1 cut(s) 1540
BmgT120I GGNCC 4 cut(s) 764, 1540, 1882, 1983
BmiI GGNNCC 3 cut(s) 1549, 1884, 1985
BmrFI CCNGG 4 cut(s) 1350, 1512, 1544, 1791
BmsI GCATC 4 cut(s) 62, 514, 658, 698
BpiI GAAGAC 1 cut(s) 645
BplI GAGNNNNNCTC 4 cut(s) 444, 476, 488, 520
BpmI CTGGAG 2 cut(s) 1443, 1773
Bpu1102I GCTNAGC 1 cut(s) 1112
BpuEI CTTGAG 1 cut(s) 314
BpuMI CCSGG 1 cut(s) 1512
Bsa29I ATCGAT 1 cut(s) 1958
BsaAI YACGTR 1 cut(s) 1081
BsaJI CCNNGG 6 cut(s) 162, 1134, 1405, 1494, 1543, 1608
Bsc4I CCNNNNNNNGG 1 cut(s) 1459
Bse118I RCCGGY 2 cut(s) 671, 1757
Bse1I ACTGG 3 cut(s) 1026, 1426, 1461
Bse3DI GCAATG 8 cut(s) 417, 811, 1000, 1156, 1390, 1743, 1914, 1919
BseBI CCWGG 3 cut(s) 1350, 1544, 1791
BseCI ATCGAT 1 cut(s) 1958
BseDI CCNNGG 6 cut(s) 162, 1134, 1405, 1494, 1543, 1608
BseGI GGATG 4 cut(s) 713, 839, 1119, 1144
BseLI CCNNNNNNNGG 1 cut(s) 1459
BseMI GCAATG 8 cut(s) 417, 811, 1000, 1156, 1390, 1743, 1914, 1919
BseMII CTCAG 1 cut(s) 306
BseNI ACTGG 3 cut(s) 1026, 1426, 1461
BseRI GAGGAG 2 cut(s) 449, 672
BseXI GCAGC 9 cut(s) 372, 476, 570, 778, 841, 943, 1808, 1817, 1935
BseYI CCCAGC 1 cut(s) 1986
BsgI GTGCAG 3 cut(s) 398, 569, 1880
Bsh1236I CGCG 1 cut(s) 1496
BshFI GGCC 6 cut(s) 765, 914, 969, 1613, 1883, 1984
BshVI ATCGAT 1 cut(s) 1958
BsiHKAI GWGCWC 3 cut(s) 457, 1300, 1641
BsiSI CCGG 3 cut(s) 672, 1512, 1758
BslI CCNNNNNNNGG 1 cut(s) 1459
BsmAI GTCTC 2 cut(s) 671, 1410
BsmI GAATGC 1 cut(s) 1748
BsnI GGCC 6 cut(s) 765, 914, 969, 1613, 1883, 1984
Bsp1286I GDGCHC 3 cut(s) 457, 1300, 1641
Bsp143I GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
Bsp1720I GCTNAGC 1 cut(s) 1112
Bsp19I CCATGG 2 cut(s) 162, 1608
BspANI GGCC 6 cut(s) 765, 914, 969, 1613, 1883, 1984
BspCNI CTCAG 1 cut(s) 307
BspDI ATCGAT 1 cut(s) 1958
BspFNI CGCG 1 cut(s) 1496
BspLI GGNNCC 3 cut(s) 1549, 1884, 1985
BspMAI CTGCAG 1 cut(s) 859
BspMI ACCTGC 1 cut(s) 1326
BspPI GGATC 1 cut(s) 174
BspQI GCTCTTC 1 cut(s) 951
BspTI CTTAAG 2 cut(s) 212, 1877
BsrBI CCGCTC 1 cut(s) 1068
BsrDI GCAATG 8 cut(s) 417, 811, 1000, 1156, 1390, 1743, 1914, 1919
BsrFI RCCGGY 2 cut(s) 671, 1757
BsrI ACTGG 3 cut(s) 1026, 1426, 1461
BssAI RCCGGY 2 cut(s) 671, 1757
BssECI CCNNGG 6 cut(s) 162, 1134, 1405, 1494, 1543, 1608
BssMI GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
BssT1I CCWWGG 4 cut(s) 162, 1134, 1405, 1608
Bst2UI CCWGG 3 cut(s) 1350, 1544, 1791
Bst4CI ACNGT 3 cut(s) 148, 346, 815
Bst6I CTCTTC 1 cut(s) 951
BstAFI CTTAAG 2 cut(s) 212, 1877
BstAPI GCANNNNNTGC 1 cut(s) 1894
BstBAI YACGTR 1 cut(s) 1081
BstC8I GCNNGC 6 cut(s) 84, 286, 438, 673, 789, 1188
BstDEI CTNAG 4 cut(s) 315, 645, 1112, 1952
BstDSI CCRYGG 3 cut(s) 162, 1494, 1608
BstEII GGTNACC 2 cut(s) 68, 1517
BstF5I GGATG 4 cut(s) 713, 839, 1119, 1144
BstFNI CGCG 1 cut(s) 1496
BstH2I RGCGCY 1 cut(s) 584
BstHHI GCGC 3 cut(s) 583, 939, 1948
BstKTI GATC 9 cut(s) 25, 78, 91, 169, 513, 1105, 1538, 1680, 1958
BstMAI GTCTC 2 cut(s) 671, 1410
BstMBI GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
BstNI CCWGG 3 cut(s) 1350, 1544, 1791
BstNSI RCATGY 1 cut(s) 288
BstPI GGTNACC 2 cut(s) 68, 1517
BstSCI CCNGG 4 cut(s) 1348, 1510, 1542, 1789
BstSFI CTRYAG 3 cut(s) 289, 468, 855
BstUI CGCG 1 cut(s) 1496
BstV1I GCAGC 9 cut(s) 372, 476, 570, 778, 841, 943, 1808, 1817, 1935
BstV2I GAAGAC 1 cut(s) 645
BstX2I RGATCY 1 cut(s) 1102
BstYI RGATCY 1 cut(s) 1102
Bsu15I ATCGAT 1 cut(s) 1958
BsuI GTATCC 1 cut(s) 365
BsuRI GGCC 6 cut(s) 765, 914, 969, 1613, 1883, 1984
BsuTUI ATCGAT 1 cut(s) 1958
BtgI CCRYGG 3 cut(s) 162, 1494, 1608
BtgZI GCGATG 1 cut(s) 1205
BtsCI GGATG 4 cut(s) 713, 839, 1119, 1144
BtsI GCAGTG 1 cut(s) 718
BtsIMutI CAGTG 3 cut(s) 342, 718, 1419
BveI ACCTGC 1 cut(s) 1326
Cac8I GCNNGC 6 cut(s) 84, 286, 438, 673, 789, 1188
CfoI GCGC 3 cut(s) 583, 939, 1948
Cfr10I RCCGGY 2 cut(s) 671, 1757
Cfr13I GGNCC 4 cut(s) 764, 1540, 1882, 1983
Cfr42I CCGCGG 1 cut(s) 1497
ClaI ATCGAT 1 cut(s) 1958
CseI GACGC 1 cut(s) 948
CsiI ACCWGGT 1 cut(s) 1348
Csp6I GTAC 6 cut(s) 144, 159, 1205, 1672, 1772, 1933
CviQI GTAC 6 cut(s) 144, 159, 1205, 1672, 1772, 1933
DdeI CTNAG 4 cut(s) 315, 645, 1112, 1952
DpnI GATC 9 cut(s) 24, 77, 90, 168, 512, 1104, 1537, 1679, 1957
DpnII GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
DraI TTTAAA 1 cut(s) 1251
EaeI YGGCCR 1 cut(s) 1611
Eam1104I CTCTTC 1 cut(s) 951
EarI CTCTTC 1 cut(s) 951
Ecl136II GAGCTC 1 cut(s) 455
Eco130I CCWWGG 4 cut(s) 162, 1134, 1405, 1608
Eco24I GRGCYC 1 cut(s) 457
Eco47I GGWCC 1 cut(s) 1540
Eco47III AGCGCT 1 cut(s) 582
Eco53kI GAGCTC 1 cut(s) 455
Eco57I CTGAAG 2 cut(s) 654, 1286
Eco91I GGTNACC 2 cut(s) 68, 1517
EcoICRI GAGCTC 1 cut(s) 455
EcoO109I RGGNCCY 2 cut(s) 1882, 1983
EcoO65I GGTNACC 2 cut(s) 68, 1517
EcoRII CCWGG 3 cut(s) 1348, 1542, 1789
EcoT14I CCWWGG 4 cut(s) 162, 1134, 1405, 1608
EcoT38I GRGCYC 1 cut(s) 457
ErhI CCWWGG 4 cut(s) 162, 1134, 1405, 1608
FalI AAGNNNNNCTT 4 cut(s) 342, 374, 978, 1010
FauI CCCGC 2 cut(s) 1489, 1893
FbaI TGATCA 1 cut(s) 22
FblI GTMKAC 2 cut(s) 1026, 1345
FokI GGATG 4 cut(s) 720, 846, 1106, 1151
FriOI GRGCYC 1 cut(s) 457
FspBI CTAG 8 cut(s) 612, 692, 830, 974, 1271, 1331, 1604, 1620
GlaI GCGC 3 cut(s) 582, 938, 1947
GsaI CCCAGC 1 cut(s) 1990
GsuI CTGGAG 2 cut(s) 1443, 1773
HaeII RGCGCY 1 cut(s) 584
HaeIII GGCC 6 cut(s) 765, 914, 969, 1613, 1883, 1984
HapII CCGG 3 cut(s) 672, 1512, 1758
HgaI GACGC 1 cut(s) 948
HhaI GCGC 3 cut(s) 583, 939, 1948
Hin6I GCGC 3 cut(s) 581, 937, 1946
HinP1I GCGC 3 cut(s) 581, 937, 1946
HincII GTYRAC 2 cut(s) 336, 1027
HindII GTYRAC 2 cut(s) 336, 1027
HinfI GANTC 7 cut(s) 34, 94, 229, 311, 679, 1359, 1555
HpaII CCGG 3 cut(s) 672, 1512, 1758
HphI GGTGA 4 cut(s) 80, 413, 941, 1753
Hpy166II GTNNAC 5 cut(s) 336, 1019, 1027, 1346, 1674
Hpy188I TCNGA 8 cut(s) 31, 93, 102, 316, 520, 964, 1041, 1540
Hpy188III TCNNGA 6 cut(s) 113, 233, 553, 700, 974, 1563
Hpy8I GTNNAC 5 cut(s) 336, 1019, 1027, 1346, 1674
Hpy99I CGWCG 1 cut(s) 494
HpyAV CCTTC 8 cut(s) 125, 278, 565, 731, 755, 959, 1432, 1498
HpyCH4III ACNGT 3 cut(s) 148, 346, 815
HpyCH4IV ACGT 6 cut(s) 492, 918, 1080, 1167, 1429, 1694
HpyF3I CTNAG 4 cut(s) 315, 645, 1112, 1952
HpySE526I ACGT 6 cut(s) 492, 918, 1080, 1167, 1429, 1694
HspAI GCGC 3 cut(s) 581, 937, 1946
KroI GCCGGC 1 cut(s) 671
KroNI GCCGGC 1 cut(s) 673
Ksp22I TGATCA 1 cut(s) 22
KspI CCGCGG 1 cut(s) 1497
Kzo9I GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
LguI GCTCTTC 1 cut(s) 951
LmnI GCTCC 3 cut(s) 452, 538, 1644
Lsp1109I GCAGC 9 cut(s) 372, 476, 570, 778, 841, 943, 1808, 1817, 1935
LweI GCATC 4 cut(s) 62, 514, 658, 698
MabI ACCWGGT 1 cut(s) 1348
MaeI CTAG 8 cut(s) 612, 692, 830, 974, 1271, 1331, 1604, 1620
MaeII ACGT 6 cut(s) 492, 918, 1080, 1167, 1429, 1694
MaeIII GTNAC 5 cut(s) 68, 866, 1352, 1517, 1753
MalI GATC 9 cut(s) 24, 77, 90, 168, 512, 1104, 1537, 1679, 1957
MbiI CCGCTC 1 cut(s) 1068
MboI GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
MboII GAAGA 6 cut(s) 533, 580, 647, 650, 938, 1822
MflI RGATCY 1 cut(s) 1102
MhlI GDGCHC 3 cut(s) 457, 1300, 1641
MlsI TGGCCA 1 cut(s) 1613
MluCI AATT 5 cut(s) 125, 604, 1246, 1324, 1711
MluNI TGGCCA 1 cut(s) 1613
MlyI GAGTC 4 cut(s) 43, 103, 673, 1368
MmeI TCCRAC 2 cut(s) 430, 776
MnlI CCTC 8 cut(s) 19, 470, 693, 696, 1133, 1387, 1660, 1696
Mox20I TGGCCA 1 cut(s) 1613
MroNI GCCGGC 1 cut(s) 671
MscI TGGCCA 1 cut(s) 1613
MseI TTAA 8 cut(s) 152, 213, 603, 629, 1127, 1250, 1433, 1878
MslI CAYNNNNRTG 3 cut(s) 379, 1374, 1613
Msp20I TGGCCA 1 cut(s) 1613
MspA1I CMGCKG 2 cut(s) 1306, 1496
MspCI CTTAAG 2 cut(s) 212, 1877
MspI CCGG 3 cut(s) 672, 1512, 1758
MspR9I CCNGG 4 cut(s) 1350, 1512, 1544, 1791
Mva1269I GAATGC 1 cut(s) 1748
MvaI CCWGG 3 cut(s) 1350, 1544, 1791
MvnI CGCG 1 cut(s) 1496
NaeI GCCGGC 1 cut(s) 673
NciI CCSGG 1 cut(s) 1512
NcoI CCATGG 2 cut(s) 162, 1608
NdeII GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
NgoMIV GCCGGC 1 cut(s) 671
NlaIV GGNNCC 3 cut(s) 1549, 1884, 1985
NmuCI GTSAC 2 cut(s) 68, 1352
NspI RCATGY 1 cut(s) 288
PaeI GCATGC 1 cut(s) 288
PciSI GCTCTTC 1 cut(s) 951
PcsI WCGNNNNNNNCGW 1 cut(s) 672
PctI GAATGC 1 cut(s) 1748
PdiI GCCGGC 1 cut(s) 673
PfeI GAWTC 3 cut(s) 229, 311, 1555
PflFI GACNNNGTC 1 cut(s) 1350
PflMI CCANNNNNTGG 1 cut(s) 1459
PfoI TCCNGGA 1 cut(s) 1789
PleI GAGTC 4 cut(s) 42, 102, 673, 1367
PpsI GAGTC 4 cut(s) 42, 102, 673, 1367
Ppu21I YACGTR 1 cut(s) 1081
PsiI TTATAA 1 cut(s) 1592
Psp124BI GAGCTC 1 cut(s) 457
Psp1406I AACGTT 1 cut(s) 1429
Psp6I CCWGG 3 cut(s) 1348, 1542, 1789
PspEI GGTNACC 2 cut(s) 68, 1517
PspFI CCCAGC 1 cut(s) 1986
PspGI CCWGG 3 cut(s) 1348, 1542, 1789
PspN4I GGNNCC 3 cut(s) 1549, 1884, 1985
PspPI GGNCC 4 cut(s) 764, 1540, 1882, 1983
PstI CTGCAG 1 cut(s) 859
PsuI RGATCY 1 cut(s) 1102
PsyI GACNNNGTC 1 cut(s) 1350
PvuII CAGCTG 1 cut(s) 1306
RsaI GTAC 6 cut(s) 145, 160, 1206, 1673, 1773, 1934
RsaNI GTAC 6 cut(s) 144, 159, 1205, 1672, 1772, 1933
RseI CAYNNNNRTG 3 cut(s) 379, 1374, 1613
SacI GAGCTC 1 cut(s) 457
SacII CCGCGG 1 cut(s) 1497
SalI GTCGAC 1 cut(s) 1025
SapI GCTCTTC 1 cut(s) 951
SaqAI TTAA 8 cut(s) 152, 213, 603, 629, 1127, 1250, 1433, 1878
Sau3AI GATC 9 cut(s) 22, 75, 88, 166, 510, 1102, 1535, 1677, 1955
Sau96I GGNCC 4 cut(s) 764, 1540, 1882, 1983
ScaI AGTACT 1 cut(s) 1773
SchI GAGTC 4 cut(s) 43, 103, 673, 1368
ScrFI CCNGG 4 cut(s) 1350, 1512, 1544, 1791
SduI GDGCHC 3 cut(s) 457, 1300, 1641
SexAI ACCWGGT 1 cut(s) 1348
SfaNI GCATC 4 cut(s) 62, 514, 658, 698
SfcI CTRYAG 3 cut(s) 289, 468, 855
Sfr303I CCGCGG 1 cut(s) 1497
SgrBI CCGCGG 1 cut(s) 1497
SinI GGWCC 1 cut(s) 1540
SmiMI CAYNNNNRTG 3 cut(s) 379, 1374, 1613
SmlI CTYRAG 3 cut(s) 212, 329, 1877
SmoI CTYRAG 3 cut(s) 212, 329, 1877
SphI GCATGC 1 cut(s) 288
Sse9I AATT 5 cut(s) 125, 604, 1246, 1324, 1711
SspI AATATT 1 cut(s) 243
SspMI CTAG 8 cut(s) 612, 692, 830, 974, 1271, 1331, 1604, 1620
SstI GAGCTC 1 cut(s) 457
StyD4I CCNGG 4 cut(s) 1348, 1510, 1542, 1789
StyI CCWWGG 4 cut(s) 162, 1134, 1405, 1608
TaaI ACNGT 3 cut(s) 148, 346, 815
TaiI ACGT 6 cut(s) 495, 921, 1083, 1170, 1432, 1697
TaqI TCGA 5 cut(s) 78, 699, 1026, 1260, 1958
TaqII GACCGA 1 cut(s) 119
TasI AATT 5 cut(s) 125, 604, 1246, 1324, 1711
TatI WGTACW 4 cut(s) 143, 1204, 1671, 1771
TauI GCSGC 3 cut(s) 188, 425, 1496
TfiI GAWTC 3 cut(s) 229, 311, 1555
Tru1I TTAA 8 cut(s) 152, 213, 603, 629, 1127, 1250, 1433, 1878
Tru9I TTAA 8 cut(s) 152, 213, 603, 629, 1127, 1250, 1433, 1878
TscAI CASTG 3 cut(s) 349, 718, 1426
TseFI GTSAC 2 cut(s) 68, 1352
TseI GCWGC 9 cut(s) 385, 464, 583, 791, 854, 956, 1805, 1821, 1948
Tsp45I GTSAC 2 cut(s) 68, 1352
TspDTI ATGAA 6 cut(s) 260, 324, 774, 998, 1401, 1451
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 3 cut(s) 349, 718, 1426
Tth111I GACNNNGTC 1 cut(s) 1350
Van91I CCANNNNNTGG 1 cut(s) 1459
Vha464I CTTAAG 2 cut(s) 212, 1877
VpaK11BI GGWCC 1 cut(s) 1540
XapI RAATTY 3 cut(s) 1246, 1324, 1711
XbaI TCTAGA 1 cut(s) 973
XceI RCATGY 1 cut(s) 288
XcmI CCANNNNNNNNNTGG 2 cut(s) 378, 1376
XmiI GTMKAC 2 cut(s) 1026, 1345
XspI CTAG 8 cut(s) 612, 692, 830, 974, 1271, 1331, 1604, 1620
ZrmI AGTACT 1 cut(s) 1773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.