Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000225

Physical Location & Seq

Genomic Coordinates Reverse (-)

6190330 .. 6199980

Gene Structure 9651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g07450.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGATCAGTTTGCGGTGAAGGTGGAGGAGGCGAGGCCGGCAGCTGATGGAAGGCCGTCGGCGGGGCCGGTGTATCGGAGCATTTATGCAAAAGATGGGCTGTTGGAGTTGCCGGAGGGGTTGGACTCACCGTGGCAGTTTCTCAGTGACTCTGTTAAGAGGAACCCAAGTGCTCGAATGCTTGGTCAACGCCAAGTCAGCGAAAAGAAGGCAGGTCCCTATGTGTGGACTACATATCAAGAGGTGTATGATGCAGCCATTCAAATGGGTTCAGCCATCAGAAGCCGTGGTGTCAATCCTGGAGATCGATGTGGTATATATGGATCAAATTGCCCCAAATGGATTATTGCAATGGAGGCCTGTAACAGCCAGGCTATCACATACGTTCCACTTTATGACACCCTCGGTGCTAATGCAGTTGAGTTCATCATCAACCATGCTGAAGTTTCAATAGCTTTTGTTCAAGAGAACAAAATCCCTGCTATTATATCATGCCTCCCAAACTGTTTCACTCATTTAAAAACAATTGTCAGCTTCACAAATGTTTCTAGCACTCAAAAGAAGGAAGCAGAAGACCTGGGGGTGTCTTGCTTTTCATGGGAGGAATTCTCTCAGTTGGGAAACTCAAATTGTGAACTACCTCCAAAACAGAGGACTGCTGTTTGCACAATAATGTATACAAGTGGAACAACTGGCGAACCAAAAGGCGTAATTGTTACTAATGCAGCATTAATGTCAGAAGTATTGTCAACAGACCATATACTCTTCCTAACAGATAGAGTGTGTAACGAAGAAGATTCCTATTTTTCGTTTCTTCCGTTGGCCCATATATATGATCAAATAATCGAGAGCTATTGCATCTACAAGGGATCCTCAATAGGCTTCTGGCGAGGCGATGTCAGGTTTTTACTGGAAGATCTTCAGGAACTAAAGCCTACTATTTTTTGTGGGGTTCCTCGAGTTTATGATCGTATATACACCGGTATTGTTGGTAAAGTTTCATCTGGTGGTCTGCTGAGGAAGACCCTTTTCCACTATGCATATAACTACAAGTTGACAAATCTGGAGAAGGGCCTACCCCAAGAAAAAGCGGCACCTCTCTTGGACAAGCTTGTGTTTCACAAGATAAAACAAGCGCTAGGAGGACGAGTTCGAATAATGCTGTCTGGTGCTGCGCCTTTGCCCAGGCATGTGGAGGAATTTTTGAGGGTCACCAGCTGCAGCACCTTATCACAAGGATATGGCCTTACTGAAAGCTGTGGTGGGTGTTTTACATCCATTGGCAATATTTATCCTATGATTGGAACTGTTGGTGTCCCCCTGACAACTATTGAAGCGCGGCTTGAGTCGGTCCCAGAACTGGGATATGATGCACTTTCTAGCGTGCCACGTGGAGAGATTTGCCTAAGAGGAAAAACCCTGTTTTCTGGTTACCACAAGCGACAAGATCTAACTGATGAAGTCCTTATTGATGAGTGGTTCCATACAGGTGATATTGGAGAATGGCAGCCGAATGGAGCAATGAAAGTTATAGACAGGAAAAAGAACATATTTAAACTGTCTCAAGGGGAATATGTTGCTGTGGAAAGCATTGAAAGCAAATACTTGCAATGCCCTCTTATCGCATCGATATGGGTTTATGGGAACAGCTTCGAGTCATTTCTTGTTGCTGTGGTTGTTCCAGACAGAAAGGCCTTGGAGGACTGGGCTGCTGAGCATAATTTGACCGATGACTACAAATCATTGTGTCAAAACCTGAAGGCAAGGAAATACATATTGGATGAGCTCAATAGTACGGGTCAGAAACAGCAACTTCGAGGGTTTGAGTTGTTAAAAGCAGTTCATTTGGAACCAAACCCCTTTGACATAGAGAGGGATCTCATGACTCCAACTTTCAAACTGAAAAGACCACAATTACTCAAATATTACAAGGAGCGAGTTGAAAAACTTTACAGTGAGGCAAAGGGTGGACAAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010143 GO:0010311 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0022622 GO:0030054 GO:0031957 GO:0032501 GO:0032502 GO:0032787 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0098542 GO:0099402 GO:1901576 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

660

Amino Acids

73.71

Weight (kDa)

6.2

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	53 - 251	7.7e-40	AMP-binding enzyme
AMP-binding	PF00501	259 - 442	3.6e-25	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49430 AT1G49430
fragaria_vesca	FvH4_2g07450 FvH4_2g07450 FvH4_2g07450 FvH4_6g05950 FvH4_6g05960
malus_domestica	MD05G1070800.v1.1 MD10G1085200.v1.1 MD10G1085400.v1.1
prunus_persica	Prupe.8G108400_v2.0.a1 Prupe.8G108600_v2.0.a1 Prupe.8G108900_v2.0.a1
pyrus_communis	pycom10g06680
rosa_chinensis	RchiOBHm_Chr0c38g0502991 RchiOBHm_Chr0c38g0503001 RchiOBHm_Chr0c38g0503011 RchiOBHm_Chr0c38g0503031 RchiOBHm_Chr1g0351481 RchiOBHm_Chr6g0261071 RchiOBHm_Chr6g0261081 RchiOBHm_Chr6g0261101 RchiOBHm_Chr6g0261171 RchiOBHm_Chr6g0261181 RchiOBHm_Chr6g0261201 RchiOBHm_Chr6g0261211 RchiOBHm_Chr6g0261271 RchiOBHm_Chr6g0261291 RchiOBHm_Chr6g0261301 RchiOBHm_Chr6g0261311 RchiOBHm_Chr6g0261431 RchiOBHm_Chr6g0261521 RchiOBHm_Chr6g0261591 RchiOBHm_Chr6g0261601 RchiOBHm_Chr6g0261611 RchiOBHm_Chr6g0261621 RchiOBHm_Chr6g0261631 RchiOBHm_Chr6g0261651 RchiOBHm_Chr6g0261671 RchiOBHm_Chr6g0261761 RchiOBHm_Chr6g0261791 RchiOBHm_Chr6g0261801 RchiOBHm_Chr6g0261891 RchiOBHm_Chr6g0261911 RchiOBHm_Chr6g0261921 RchiOBHm_Chr6g0261931 RchiOBHm_Chr6g0261951 RchiOBHm_Chr6g0261961 RchiOBHm_Chr6g0261981 RchiOBHm_Chr6g0262641 RchiOBHm_Chr6g0262661 RchiOBHm_Chr6g0262711 RchiOBHm_Chr6g0262721 RchiOBHm_Chr6g0262801 RchiOBHm_Chr6g0262811 RchiOBHm_Chr6g0262821 RchiOBHm_Chr6g0262831 RchiOBHm_Chr6g0262871 RchiOBHm_Chr6g0262881 RchiOBHm_Chr6g0267811
rosa_laevigata	RLG00000014207 RLG00000014410 RLG00000014461 RLG00000014462 RLG00000014463 RLG00000030683
rosa_multiflora	Rmu_co8313283.1_g000002 Rmu_sc0000596.1_g000052 Rmu_sc0001833.1_g000009 Rmu_sc0003487.1_g000003 Rmu_sc0003487.1_g000007 Rmu_sc0004766.1_g000001 Rmu_sc0005237.1_g000021 Rmu_sc0006655.1_g000001 Rmu_sc0015236.1_g000003 Rmu_sc0015236.1_g000004 Rmu_sc0028652.1_g000010 Rmu_sc0031142.1_g000001 Rmu_sc0036063.1_g000001 Rmu_ssc0000359.1_g000047 Rmu_ssc0000359.1_g000054 Rmu_ssc0000359.1_g000058 Rmu_ssc0000359.1_g000060
rosa_roxburghii	Rroxscaffold_175G00432240 Rroxscaffold_177G00434140 Rroxscaffold_177G00434220 Rroxscaffold_2G00103180 Rroxscaffold_2G00103450 Rroxscaffold_4G00314540 Rroxscaffold_7G00202920 Rroxscaffold_7G00202940 Rroxscaffold_7G00207640 Rroxscaffold_7G00207650 Rroxscaffold_7G00207670 Rroxscaffold_7G00207690 Rroxscaffold_7G00207700 Rroxscaffold_7G00207720
rosa_rugosa	Rorug05G0594700 Rorug05G0594900 Rorug06G0013300 Rorug07G0072100
rosa_samantha	Rh4AG177500 Rh5AG318000 Rh6AG114200 Rh6AG120600 Rh6AG137000 Rh6AG137100 Rh6AG161100 Rh6BG107900 Rh6BG108000 Rh6BG108200 Rh6BG108300 Rh6BG108400 Rh6BG113800 Rh6BG134400 Rh6BG134500 Rh6BG134600 Rh6BG134700 Rh6BG134900 Rh6BG135100 Rh6BG135300 Rh6BG135400 Rh6CG105000 Rh6CG105100 Rh6CG105500 Rh6CG105600 Rh6CG105700 Rh6CG105800 Rh6CG111800 Rh6CG132500 Rh6CG132900 Rh6CG133000 Rh6CG133200 Rh6CG133400 Rh6CG133500 Rh6CG133600 Rh6CG133700 Rh6CG133800 Rh6CG152600 Rh6CG159000 Rh6DG120200
rosa_wichuraiana	Rw0G012740 Rw6G002860 Rw6G009790 Rw6G010330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	203
AccB1I	GGYRCC	1 cut(s)	1093
AccI	GTMKAC	1 cut(s)	677
AccII	CGCG	1 cut(s)	1339
AciI	CCGC	4 cut(s)	14, 62, 1091, 1339
AclWI	GGATC	5 cut(s)	12, 331, 864, 877, 1884
AcsI	RAATTY	2 cut(s)	605, 1199
AcuI	CTGAAG	3 cut(s)	462, 905, 1778
AcvI	CACGTG	1 cut(s)	1391
AfaI	GTAC	1 cut(s)	1795
AfeI	AGCGCT	1 cut(s)	1137
AfiI	CCNNNNNNNGG	5 cut(s)	62, 225, 1301, 1360, 1361
AgeI	ACCGGT	1 cut(s)	980
AgsI	TTSAA	7 cut(s)	263, 450, 464, 1334, 1595, 1897, 1943
AjnI	CCWGG	4 cut(s)	298, 369, 576, 1184
AjuI	GAANNNNNNNTTGG	2 cut(s)	1760, 1792
AloI	GAACNNNNNNTCC	2 cut(s)	1134, 1166
AluBI	AGCT	9 cut(s)	44, 455, 534, 852, 1111, 1218, 1257, 1650, 1786
AluI	AGCT	9 cut(s)	44, 455, 534, 852, 1111, 1218, 1257, 1650, 1786
Alw21I	GWGCWC	2 cut(s)	175, 1788
Alw26I	GTCTC	1 cut(s)	1566
AlwI	GGATC	5 cut(s)	12, 331, 864, 877, 1884
Ama87I	CYCGRG	1 cut(s)	957
Aor51HI	AGCGCT	1 cut(s)	1137
AoxI	GGCC	8 cut(s)	35, 53, 65, 357, 822, 1072, 1243, 1692
ApeKI	GCWGC	8 cut(s)	41, 254, 725, 1172, 1218, 1221, 1507, 1709
ApoI	RAATTY	2 cut(s)	605, 1199
ArsI	GACNNNNNNTTYG	2 cut(s)	169, 201
AseI	ATTAAT	1 cut(s)	731
AsiGI	ACCGGT	1 cut(s)	980
Asp700I	GAANNNNTTC	2 cut(s)	918, 1649
AspLEI	GCGC	3 cut(s)	1138, 1177, 1339
AspS9I	GGNCC	5 cut(s)	65, 215, 823, 1072, 1351
AsuHPI	GGTGA	4 cut(s)	28, 120, 1204, 1502
AsuII	TTCGAA	1 cut(s)	1153
AvaI	CYCGRG	1 cut(s)	957
AvaII	GGWCC	2 cut(s)	215, 1351
BamHI	GGATCC	1 cut(s)	869
BanI	GGYRCC	1 cut(s)	1093
BanII	GRGCYC	1 cut(s)	1788
BbrPI	CACGTG	1 cut(s)	1391
BbsI	GAAGAC	2 cut(s)	579, 1028
Bbv12I	GWGCWC	2 cut(s)	175, 1788
BbvCI	CCTCAGC	1 cut(s)	1016
BbvI	GCAGC	8 cut(s)	53, 266, 737, 1159, 1205, 1233, 1519, 1696
BccI	CCATC	3 cut(s)	41, 89, 284
BceAI	ACGGC	2 cut(s)	40, 270
BciT130I	CCWGG	4 cut(s)	300, 371, 578, 1186
BclI	TGATCA	1 cut(s)	835
BcoDI	GTCTC	1 cut(s)	1566
BfaI	CTAG	3 cut(s)	549, 1139, 1380
BfmI	CTRYAG	1 cut(s)	1219
BfoI	RGCGCY	1 cut(s)	1139
BfuAI	ACCTGC	1 cut(s)	203
BglII	AGATCT	2 cut(s)	916, 1447
BlpI	GCTNAGC	1 cut(s)	1713
Bme1390I	CCNGG	4 cut(s)	300, 371, 578, 1186
Bme18I	GGWCC	2 cut(s)	215, 1351
BmeT110I	CYCGRG	1 cut(s)	957
BmgT120I	GGNCC	5 cut(s)	65, 215, 823, 1072, 1351
BmiI	GGNNCC	9 cut(s)	66, 164, 217, 871, 954, 1095, 1353, 1481, 1851
BmrFI	CCNGG	4 cut(s)	300, 371, 578, 1186
BmrI	ACTGGG	2 cut(s)	1370, 1714
BmsI	GCATC	4 cut(s)	241, 867, 1360, 1634
BmuI	ACTGGG	2 cut(s)	1370, 1714
BpiI	GAAGAC	2 cut(s)	579, 1028
BplI	GAGNNNNNCTC	2 cut(s)	593, 625
BpmI	CTGGAG	2 cut(s)	321, 1085
Bpu10I	CCTNAGC	1 cut(s)	1016
Bpu1102I	GCTNAGC	1 cut(s)	1713
Bpu14I	TTCGAA	1 cut(s)	1153
BpuEI	CTTGAG	2 cut(s)	1364, 1548
Bsa29I	ATCGAT	2 cut(s)	307, 1628
BsaAI	YACGTR	1 cut(s)	1391
BsaJI	CCNNGG	6 cut(s)	131, 286, 403, 577, 1184, 1695
BsaWI	WCCGGW	1 cut(s)	980
BsaXI	ACNNNNNCTCC	2 cut(s)	1134, 1164
Bsc4I	CCNNNNNNNGG	5 cut(s)	62, 225, 1301, 1360, 1361
Bse118I	RCCGGY	3 cut(s)	37, 67, 980
Bse1I	ACTGG	4 cut(s)	697, 915, 1365, 1709
Bse3DI	GCAATG	3 cut(s)	357, 1527, 1616
BseBI	CCWGG	4 cut(s)	300, 371, 578, 1186
BseCI	ATCGAT	2 cut(s)	307, 1628
BseDI	CCNNGG	6 cut(s)	131, 286, 403, 577, 1184, 1695
BseGI	GGATG	2 cut(s)	1274, 1786
BseLI	CCNNNNNNNGG	5 cut(s)	62, 225, 1301, 1360, 1361
BseMI	GCAATG	3 cut(s)	357, 1527, 1616
BseMII	CTCAG	4 cut(s)	157, 626, 1007, 1704
BseNI	ACTGG	4 cut(s)	697, 915, 1365, 1709
BseRI	GAGGAG	1 cut(s)	41
BseXI	GCAGC	8 cut(s)	53, 266, 737, 1159, 1205, 1233, 1519, 1696
Bsh1236I	CGCG	1 cut(s)	1339
BshFI	GGCC	8 cut(s)	37, 55, 67, 359, 824, 1074, 1245, 1694
BshNI	GGYRCC	1 cut(s)	1093
BshTI	ACCGGT	1 cut(s)	980
BshVI	ATCGAT	2 cut(s)	307, 1628
BsiHKAI	GWGCWC	2 cut(s)	175, 1788
BsiHKCI	CYCGRG	1 cut(s)	957
BsiSI	CCGG	4 cut(s)	38, 68, 113, 981
BslFI	GGGAC	3 cut(s)	201, 1301, 1337
BslI	CCNNNNNNNGG	5 cut(s)	62, 225, 1301, 1360, 1361
BsmAI	GTCTC	1 cut(s)	1566
BsmFI	GGGAC	3 cut(s)	201, 1301, 1337
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	8 cut(s)	37, 55, 67, 359, 824, 1074, 1245, 1694
BsoBI	CYCGRG	1 cut(s)	957
Bsp119I	TTCGAA	1 cut(s)	1153
Bsp1286I	GDGCHC	2 cut(s)	175, 1788
Bsp143I	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
Bsp1720I	GCTNAGC	1 cut(s)	1713
BspACI	CCGC	4 cut(s)	14, 62, 1091, 1339
BspANI	GGCC	8 cut(s)	37, 55, 67, 359, 824, 1074, 1245, 1694
BspCNI	CTCAG	4 cut(s)	156, 625, 1008, 1705
BspDI	ATCGAT	2 cut(s)	307, 1628
BspFNI	CGCG	1 cut(s)	1339
BspHI	TCATGA	1 cut(s)	1881
BspLI	GGNNCC	9 cut(s)	66, 164, 217, 871, 954, 1095, 1353, 1481, 1851
BspMAI	CTGCAG	1 cut(s)	1223
BspMI	ACCTGC	1 cut(s)	203
BspPI	GGATC	5 cut(s)	12, 331, 864, 877, 1884
BspT104I	TTCGAA	1 cut(s)	1153
BspT107I	GGYRCC	1 cut(s)	1093
BsrDI	GCAATG	3 cut(s)	357, 1527, 1616
BsrFI	RCCGGY	3 cut(s)	37, 67, 980
BsrI	ACTGG	4 cut(s)	697, 915, 1365, 1709
BssAI	RCCGGY	3 cut(s)	37, 67, 980
BssECI	CCNNGG	6 cut(s)	131, 286, 403, 577, 1184, 1695
BssMI	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
BssNAI	GTATAC	1 cut(s)	678
BssT1I	CCWWGG	1 cut(s)	1695
Bst1107I	GTATAC	1 cut(s)	678
Bst2UI	CCWGG	4 cut(s)	300, 371, 578, 1186
Bst4CI	ACNGT	5 cut(s)	132, 506, 1309, 1560, 1955
Bst6I	CTCTTC	1 cut(s)	770
BstBAI	YACGTR	1 cut(s)	1391
BstBI	TTCGAA	1 cut(s)	1153
BstC8I	GCNNGC	2 cut(s)	39, 1385
BstDEI	CTNAG	5 cut(s)	143, 612, 1016, 1406, 1713
BstDSI	CCRYGG	2 cut(s)	131, 286
BstEII	GGTNACC	2 cut(s)	1210, 1430
BstF5I	GGATG	2 cut(s)	1274, 1786
BstFNI	CGCG	1 cut(s)	1339
BstH2I	RGCGCY	1 cut(s)	1139
BstHHI	GCGC	3 cut(s)	1138, 1177, 1339
BstKTI	GATC	9 cut(s)	7, 307, 326, 838, 872, 919, 970, 1450, 1879
BstMAI	GTCTC	1 cut(s)	1566
BstMBI	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 198, 356, 1596
BstNI	CCWGG	4 cut(s)	300, 371, 578, 1186
BstNSI	RCATGY	1 cut(s)	1193
BstPI	GGTNACC	2 cut(s)	1210, 1430
BstSCI	CCNGG	4 cut(s)	298, 369, 576, 1184
BstSFI	CTRYAG	1 cut(s)	1219
BstUI	CGCG	1 cut(s)	1339
BstV1I	GCAGC	8 cut(s)	53, 266, 737, 1159, 1205, 1233, 1519, 1696
BstV2I	GAAGAC	2 cut(s)	579, 1028
BstX2I	RGATCY	4 cut(s)	869, 916, 1447, 1876
BstXI	CCANNNNNNTGG	2 cut(s)	265, 1192
BstYI	RGATCY	4 cut(s)	869, 916, 1447, 1876
BstZ17I	GTATAC	1 cut(s)	678
Bsu15I	ATCGAT	2 cut(s)	307, 1628
BsuRI	GGCC	8 cut(s)	37, 55, 67, 359, 824, 1074, 1245, 1694
BsuTUI	ATCGAT	2 cut(s)	307, 1628
BtgI	CCRYGG	2 cut(s)	131, 286
BtgZI	GCGATG	1 cut(s)	909
BtsCI	GGATG	2 cut(s)	1274, 1786
BtsIMutI	CAGTG	2 cut(s)	151, 1960
BveI	ACCTGC	1 cut(s)	203
Cac8I	GCNNGC	2 cut(s)	39, 1385
CciI	TCATGA	1 cut(s)	1881
CfoI	GCGC	3 cut(s)	1138, 1177, 1339
Cfr10I	RCCGGY	3 cut(s)	37, 67, 980
Cfr13I	GGNCC	5 cut(s)	65, 215, 823, 1072, 1351
ClaI	ATCGAT	2 cut(s)	307, 1628
Csp6I	GTAC	1 cut(s)	1794
CspAI	ACCGGT	1 cut(s)	980
CviAII	CATG	5 cut(s)	437, 492, 597, 1190, 1882
CviQI	GTAC	1 cut(s)	1794
DdeI	CTNAG	5 cut(s)	143, 612, 1016, 1406, 1713
DpnI	GATC	9 cut(s)	6, 306, 325, 837, 871, 918, 969, 1449, 1878
DpnII	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
DraI	TTTAAA	2 cut(s)	519, 1555
Eam1104I	CTCTTC	1 cut(s)	770
EarI	CTCTTC	1 cut(s)	770
Ecl136II	GAGCTC	1 cut(s)	1786
Eco130I	CCWWGG	1 cut(s)	1695
Eco147I	AGGCCT	2 cut(s)	359, 1694
Eco24I	GRGCYC	1 cut(s)	1788
Eco47I	GGWCC	2 cut(s)	215, 1351
Eco47III	AGCGCT	1 cut(s)	1137
Eco53kI	GAGCTC	1 cut(s)	1786
Eco57I	CTGAAG	3 cut(s)	462, 905, 1778
Eco72I	CACGTG	1 cut(s)	1391
Eco88I	CYCGRG	1 cut(s)	957
Eco91I	GGTNACC	2 cut(s)	1210, 1430
EcoICRI	GAGCTC	1 cut(s)	1786
EcoO109I	RGGNCCY	2 cut(s)	215, 1072
EcoO65I	GGTNACC	2 cut(s)	1210, 1430
EcoRI	GAATTC	1 cut(s)	605
EcoRII	CCWGG	4 cut(s)	298, 369, 576, 1184
EcoT14I	CCWWGG	1 cut(s)	1695
EcoT22I	ATGCAT	1 cut(s)	1042
EcoT38I	GRGCYC	1 cut(s)	1788
ErhI	CCWWGG	1 cut(s)	1695
FaeI	CATG	5 cut(s)	440, 495, 600, 1193, 1885
FalI	AAGNNNNNCTT	2 cut(s)	1326, 1358
FaqI	GGGAC	3 cut(s)	201, 1301, 1337
FatI	CATG	5 cut(s)	436, 491, 596, 1189, 1881
FauI	CCCGC	1 cut(s)	55
FbaI	TGATCA	1 cut(s)	835
FblI	GTMKAC	1 cut(s)	677
FokI	GGATG	2 cut(s)	1261, 1793
FriOI	GRGCYC	1 cut(s)	1788
FspBI	CTAG	3 cut(s)	549, 1139, 1380
GlaI	GCGC	3 cut(s)	1137, 1176, 1338
GsuI	CTGGAG	2 cut(s)	321, 1085
HaeII	RGCGCY	1 cut(s)	1139
HaeIII	GGCC	8 cut(s)	37, 55, 67, 359, 824, 1074, 1245, 1694
HapII	CCGG	4 cut(s)	38, 68, 113, 981
HhaI	GCGC	3 cut(s)	1138, 1177, 1339
Hin1II	CATG	5 cut(s)	440, 495, 600, 1193, 1885
Hin6I	GCGC	3 cut(s)	1136, 1175, 1337
HinP1I	GCGC	3 cut(s)	1136, 1175, 1337
HincII	GTYRAC	3 cut(s)	188, 750, 1056
HindII	GTYRAC	3 cut(s)	188, 750, 1056
HindIII	AAGCTT	1 cut(s)	1109
HinfI	GANTC	6 cut(s)	125, 149, 797, 1346, 1655, 1885
HpaII	CCGG	4 cut(s)	38, 68, 113, 981
HphI	GGTGA	4 cut(s)	28, 120, 1204, 1502
Hpy166II	GTNNAC	7 cut(s)	188, 228, 635, 678, 750, 1056, 1970
Hpy188I	TCNGA	4 cut(s)	78, 281, 739, 1803
Hpy188III	TCNNGA	7 cut(s)	239, 464, 847, 923, 1064, 1682, 1882
Hpy8I	GTNNAC	7 cut(s)	188, 228, 635, 678, 750, 1056, 1970
Hpy99I	CGWCG	1 cut(s)	61
HpyAV	CCTTC	6 cut(s)	13, 45, 202, 556, 1063, 1753
HpyCH4III	ACNGT	5 cut(s)	132, 506, 1309, 1560, 1955
HpyCH4IV	ACGT	2 cut(s)	384, 1390
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 198, 356, 1596
HpyF3I	CTNAG	5 cut(s)	143, 612, 1016, 1406, 1713
HpySE526I	ACGT	2 cut(s)	384, 1390
Hsp92II	CATG	5 cut(s)	440, 495, 600, 1193, 1885
HspAI	GCGC	3 cut(s)	1136, 1175, 1337
KroI	GCCGGC	1 cut(s)	37
KroNI	GCCGGC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	835
Kzo9I	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
LmnI	GCTCC	3 cut(s)	78, 1517, 1933
Lsp1109I	GCAGC	8 cut(s)	53, 266, 737, 1159, 1205, 1233, 1519, 1696
LweI	GCATC	4 cut(s)	241, 867, 1360, 1634
MaeI	CTAG	3 cut(s)	549, 1139, 1380
MaeII	ACGT	2 cut(s)	384, 1390
MaeIII	GTNAC	6 cut(s)	146, 362, 715, 785, 1210, 1430
MalI	GATC	9 cut(s)	6, 306, 325, 837, 871, 918, 969, 1449, 1878
MboI	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
MboII	GAAGA	8 cut(s)	584, 757, 803, 806, 806, 911, 926, 1033
MfeI	CAATTG	1 cut(s)	525
MflI	RGATCY	4 cut(s)	869, 916, 1447, 1876
MhlI	GDGCHC	2 cut(s)	175, 1788
MluCI	AATT	8 cut(s)	328, 525, 605, 628, 711, 1199, 1720, 1913
MlyI	GAGTC	5 cut(s)	119, 143, 1355, 1664, 1879
MmeI	TCCRAC	3 cut(s)	84, 102, 1913
Mph1103I	ATGCAT	1 cut(s)	1042
MroNI	GCCGGC	1 cut(s)	37
MroXI	GAANNNNTTC	2 cut(s)	918, 1649
MseI	TTAA	5 cut(s)	156, 518, 731, 1554, 1832
MslI	CAYNNNNRTG	5 cut(s)	263, 671, 831, 1488, 1630
MspA1I	CMGCKG	2 cut(s)	44, 1218
MspI	CCGG	4 cut(s)	38, 68, 113, 981
MspR9I	CCNGG	4 cut(s)	300, 371, 578, 1186
MunI	CAATTG	1 cut(s)	525
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	4 cut(s)	300, 371, 578, 1186
MvnI	CGCG	1 cut(s)	1339
MwoI	GCNNNNNNNGC	4 cut(s)	38, 198, 356, 1596
NaeI	GCCGGC	1 cut(s)	39
NdeII	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
NgoMIV	GCCGGC	1 cut(s)	37
NlaIII	CATG	5 cut(s)	440, 495, 600, 1193, 1885
NlaIV	GGNNCC	9 cut(s)	66, 164, 217, 871, 954, 1095, 1353, 1481, 1851
NmuCI	GTSAC	2 cut(s)	146, 1210
NsiI	ATGCAT	1 cut(s)	1042
NspI	RCATGY	1 cut(s)	1193
NspV	TTCGAA	1 cut(s)	1153
PaeR7I	CTCGAG	1 cut(s)	957
PagI	TCATGA	1 cut(s)	1881
PceI	AGGCCT	2 cut(s)	359, 1694
PcsI	WCGNNNNNNNCGW	1 cut(s)	815
PctI	GAATGC	1 cut(s)	183
PdiI	GCCGGC	1 cut(s)	39
PdmI	GAANNNNTTC	2 cut(s)	918, 1649
PfeI	GAWTC	1 cut(s)	797
PfoI	TCCNGGA	1 cut(s)	298
PinAI	ACCGGT	1 cut(s)	980
PleI	GAGTC	5 cut(s)	119, 143, 1354, 1663, 1879
PmaCI	CACGTG	1 cut(s)	1391
PmlI	CACGTG	1 cut(s)	1391
PpsI	GAGTC	5 cut(s)	119, 143, 1354, 1663, 1879
Ppu21I	YACGTR	1 cut(s)	1391
PpuMI	RGGWCCY	1 cut(s)	215
PshBI	ATTAAT	1 cut(s)	731
Psp124BI	GAGCTC	1 cut(s)	1788
Psp5II	RGGWCCY	1 cut(s)	215
Psp6I	CCWGG	4 cut(s)	298, 369, 576, 1184
PspCI	CACGTG	1 cut(s)	1391
PspEI	GGTNACC	2 cut(s)	1210, 1430
PspGI	CCWGG	4 cut(s)	298, 369, 576, 1184
PspN4I	GGNNCC	9 cut(s)	66, 164, 217, 871, 954, 1095, 1353, 1481, 1851
PspPI	GGNCC	5 cut(s)	65, 215, 823, 1072, 1351
PspPPI	RGGWCCY	1 cut(s)	215
PspXI	VCTCGAGB	1 cut(s)	957
PstI	CTGCAG	1 cut(s)	1223
PsuI	RGATCY	4 cut(s)	869, 916, 1447, 1876
PvuII	CAGCTG	2 cut(s)	44, 1218
RsaI	GTAC	1 cut(s)	1795
RsaNI	GTAC	1 cut(s)	1794
RseI	CAYNNNNRTG	5 cut(s)	263, 671, 831, 1488, 1630
SacI	GAGCTC	1 cut(s)	1788
SaqAI	TTAA	5 cut(s)	156, 518, 731, 1554, 1832
Sau3AI	GATC	9 cut(s)	4, 304, 323, 835, 869, 916, 967, 1447, 1876
Sau96I	GGNCC	5 cut(s)	65, 215, 823, 1072, 1351
SchI	GAGTC	5 cut(s)	119, 143, 1355, 1664, 1879
ScrFI	CCNGG	4 cut(s)	300, 371, 578, 1186
SduI	GDGCHC	2 cut(s)	175, 1788
SfaNI	GCATC	4 cut(s)	241, 867, 1360, 1634
SfcI	CTRYAG	1 cut(s)	1219
Sfr274I	CTCGAG	1 cut(s)	957
SfuI	TTCGAA	1 cut(s)	1153
SinI	GGWCC	2 cut(s)	215, 1351
SlaI	CTCGAG	1 cut(s)	957
SmiMI	CAYNNNNRTG	5 cut(s)	263, 671, 831, 1488, 1630
SmlI	CTYRAG	3 cut(s)	957, 1343, 1563
SmoI	CTYRAG	3 cut(s)	957, 1343, 1563
Sse9I	AATT	8 cut(s)	328, 525, 605, 628, 711, 1199, 1720, 1913
SseBI	AGGCCT	2 cut(s)	359, 1694
SsiI	CCGC	4 cut(s)	14, 62, 1091, 1339
SspI	AATATT	2 cut(s)	1288, 1925
SspMI	CTAG	3 cut(s)	549, 1139, 1380
SstI	GAGCTC	1 cut(s)	1788
StuI	AGGCCT	2 cut(s)	359, 1694
StyD4I	CCNGG	4 cut(s)	298, 369, 576, 1184
StyI	CCWWGG	1 cut(s)	1695
TaaI	ACNGT	5 cut(s)	132, 506, 1309, 1560, 1955
TaiI	ACGT	2 cut(s)	387, 1393
TaqI	TCGA	8 cut(s)	175, 307, 846, 958, 1153, 1628, 1653, 1816
TaqII	GACCGA	2 cut(s)	1339, 1742
TasI	AATT	8 cut(s)	328, 525, 605, 628, 711, 1199, 1720, 1913
TauI	GCSGC	2 cut(s)	1094, 1342
TfiI	GAWTC	1 cut(s)	797
Tru1I	TTAA	5 cut(s)	156, 518, 731, 1554, 1832
Tru9I	TTAA	5 cut(s)	156, 518, 731, 1554, 1832
TscAI	CASTG	2 cut(s)	151, 1960
TseFI	GTSAC	2 cut(s)	146, 1210
TseI	GCWGC	8 cut(s)	41, 254, 725, 1172, 1218, 1221, 1507, 1709
Tsp45I	GTSAC	2 cut(s)	146, 1210
TspDTI	ATGAA	6 cut(s)	415, 585, 990, 1473, 1538, 1832
TspGWI	ACGGA	1 cut(s)	807
TspRI	CASTG	2 cut(s)	151, 1960
VpaK11BI	GGWCC	2 cut(s)	215, 1351
VspI	ATTAAT	1 cut(s)	731
XapI	RAATTY	2 cut(s)	605, 1199
XceI	RCATGY	1 cut(s)	1193
XhoI	CTCGAG	1 cut(s)	957
XmiI	GTMKAC	1 cut(s)	677
XmnI	GAANNNNTTC	2 cut(s)	918, 1649
XspI	CTAG	3 cut(s)	549, 1139, 1380
Zsp2I	ATGCAT	1 cut(s)	1042

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.