Rmu_ssc0000359.1_g000054

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000359.1
OG0000225
Physical Location & Seq
Reverse (-)
269561 .. 278827
9267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000359.1_g000054.1.cds

Sequence Viewer

Length: 1587 bp
atgcagctcttctgttggaatgccttcacaggacgtttggatggtatatatttgctgctggcacaagttgcggtacatcatgctcaaggcattccattagctttggtggttttaggttcatgtctgtatggtgaaagttggtatgattggacagatgtattagatgatttaaaaagagttgttgatcgtaaacaagttactcaagaaattctcaaaatatgttataatgcattagaagatttggtgaaagaagttttccttcaaattgcatgttcttttgatggacaaaaacagataaatctgatgaaggaactagcacattttgtccctaatcttatgcatggtatccaagttctgacagagaaggccttcataaatattggagcaagtcatgtacccatgacgcatgaattgcttaaagaaatggctacagagttagtcaggcaaaagtctgcaaataagctttgggatagcaaattttggatcctcagggatttttgcgtttatcttccgaaatactctgcagtaagtatagctaaagacatcatgaagaagtgttctaaaccacatgagataccattcagaactactgagttggctgaattctggtctaaaatcagtatgcatggaagttatgtcacgaccagtggagggattcaagaaggtcctcattccaaagctataaattcaagcggcatggaggaaggtgttcctccaactgatggcagtggtgctcaaggtttgagagctgagcatagggacccaaaagagagaagttatttccaaattggtataaaagctgctattttgggaaatttccaaaaatgtcaaaccggtttcccattttggaaacccggcgcatttctctctttctctctccccgagccggccgaaaacagagcacggaggctccggcctggttctccgccctccggccaccaaacgacgccggaccacctccagcagcttcgtctccctcctccgaaaccatctgaggcaaccttgcatggcggcgccgcctgtatcggcggtggtgagctcaaggaatcgaggcctgaaattgaagtttttacgtcgaaaatcgagctcgccggtttctggaaattctcgccggtttctggaaattttccggccaccttcatactgttcaaggtaattgtcgaccccttccggtcattttcagacttcgtgctagttacgaaaattattgggcttgatgagaggaagaggagcagccaggccccgacaccattggcggtggtcggcggcggctctgcctcttttccggcggccattttccggccacctccgggggatgtcaggtttttactggatgaccttcaggagctaaagcctaccatgttttgtggggtttctcgagtttatgactgtatatacactggtgatattggagaatggcagcctattggagcaatgaaagttatagacaggaaaaataacatgtttaaactgtctcaaggtgaatacgttgctgtggaaagcattgaaagcaaatacttgcaatgcccccttatcacatcgcgtcctccaccttctttcatgttttctgaagttacagacggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

528

Amino Acids

58.78

Weight (kDa)

7.57

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000225)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49430 AT1G49430
fragaria_vesca FvH4_2g07450 FvH4_2g07450 FvH4_2g07450 FvH4_6g05950 FvH4_6g05960
malus_domestica MD05G1070800.v1.1 MD10G1085200.v1.1 MD10G1085400.v1.1
prunus_persica Prupe.8G108400_v2.0.a1 Prupe.8G108600_v2.0.a1 Prupe.8G108900_v2.0.a1
pyrus_communis pycom10g06680
rosa_chinensis RchiOBHm_Chr0c38g0502991 RchiOBHm_Chr0c38g0503001 RchiOBHm_Chr0c38g0503011 RchiOBHm_Chr0c38g0503031 RchiOBHm_Chr1g0351481 RchiOBHm_Chr6g0261071 RchiOBHm_Chr6g0261081 RchiOBHm_Chr6g0261101 RchiOBHm_Chr6g0261171 RchiOBHm_Chr6g0261181 RchiOBHm_Chr6g0261201 RchiOBHm_Chr6g0261211 RchiOBHm_Chr6g0261271 RchiOBHm_Chr6g0261291 RchiOBHm_Chr6g0261301 RchiOBHm_Chr6g0261311 RchiOBHm_Chr6g0261431 RchiOBHm_Chr6g0261521 RchiOBHm_Chr6g0261591 RchiOBHm_Chr6g0261601 RchiOBHm_Chr6g0261611 RchiOBHm_Chr6g0261621 RchiOBHm_Chr6g0261631 RchiOBHm_Chr6g0261651 RchiOBHm_Chr6g0261671 RchiOBHm_Chr6g0261761 RchiOBHm_Chr6g0261791 RchiOBHm_Chr6g0261801 RchiOBHm_Chr6g0261891 RchiOBHm_Chr6g0261911 RchiOBHm_Chr6g0261921 RchiOBHm_Chr6g0261931 RchiOBHm_Chr6g0261951 RchiOBHm_Chr6g0261961 RchiOBHm_Chr6g0261981 RchiOBHm_Chr6g0262641 RchiOBHm_Chr6g0262661 RchiOBHm_Chr6g0262711 RchiOBHm_Chr6g0262721 RchiOBHm_Chr6g0262801 RchiOBHm_Chr6g0262811 RchiOBHm_Chr6g0262821 RchiOBHm_Chr6g0262831 RchiOBHm_Chr6g0262871 RchiOBHm_Chr6g0262881 RchiOBHm_Chr6g0267811
rosa_laevigata RLG00000014207 RLG00000014410 RLG00000014461 RLG00000014462 RLG00000014463 RLG00000030683
rosa_multiflora Rmu_co8313283.1_g000002 Rmu_sc0000596.1_g000052 Rmu_sc0001833.1_g000009 Rmu_sc0003487.1_g000003 Rmu_sc0003487.1_g000007 Rmu_sc0004766.1_g000001 Rmu_sc0005237.1_g000021 Rmu_sc0006655.1_g000001 Rmu_sc0015236.1_g000003 Rmu_sc0015236.1_g000004 Rmu_sc0028652.1_g000010 Rmu_sc0031142.1_g000001 Rmu_sc0036063.1_g000001 Rmu_ssc0000359.1_g000047 Rmu_ssc0000359.1_g000054 Rmu_ssc0000359.1_g000058 Rmu_ssc0000359.1_g000060
rosa_roxburghii Rroxscaffold_175G00432240 Rroxscaffold_177G00434140 Rroxscaffold_177G00434220 Rroxscaffold_2G00103180 Rroxscaffold_2G00103450 Rroxscaffold_4G00314540 Rroxscaffold_7G00202920 Rroxscaffold_7G00202940 Rroxscaffold_7G00207640 Rroxscaffold_7G00207650 Rroxscaffold_7G00207670 Rroxscaffold_7G00207690 Rroxscaffold_7G00207700 Rroxscaffold_7G00207720
rosa_rugosa Rorug05G0594700 Rorug05G0594900 Rorug06G0013300 Rorug07G0072100
rosa_samantha Rh4AG177500 Rh5AG318000 Rh6AG114200 Rh6AG120600 Rh6AG137000 Rh6AG137100 Rh6AG161100 Rh6BG107900 Rh6BG108000 Rh6BG108200 Rh6BG108300 Rh6BG108400 Rh6BG113800 Rh6BG134400 Rh6BG134500 Rh6BG134600 Rh6BG134700 Rh6BG134900 Rh6BG135100 Rh6BG135300 Rh6BG135400 Rh6CG105000 Rh6CG105100 Rh6CG105500 Rh6CG105600 Rh6CG105700 Rh6CG105800 Rh6CG111800 Rh6CG132500 Rh6CG132900 Rh6CG133000 Rh6CG133200 Rh6CG133400 Rh6CG133500 Rh6CG133600 Rh6CG133700 Rh6CG133800 Rh6CG152600 Rh6CG159000 Rh6DG120200
rosa_wichuraiana Rw0G012740 Rw6G002860 Rw6G009790 Rw6G010330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 225
AccB1I GGYRCC 1 cut(s) 1013
AccB7I CCANNNNNTGG 1 cut(s) 722
AccI GTMKAC 1 cut(s) 1161
AccII CGCG 1 cut(s) 1543
AclWI GGATC 2 cut(s) 478, 491
AcoI YGGCCR 5 cut(s) 888, 934, 1131, 1290, 1301
AcsI RAATTY 7 cut(s) 207, 476, 602, 685, 814, 1103, 1123
AcuI CTGAAG 1 cut(s) 1325
AcyI GRCGYC 2 cut(s) 947, 1014
AfaI GTAC 2 cut(s) 75, 396
AfiI CCNNNNNNNGG 8 cut(s) 651, 722, 886, 932, 1098, 1118, 1299, 1310
AflIII ACRYGT 1 cut(s) 1461
AgeI ACCGGT 1 cut(s) 833
AgsI TTSAA 6 cut(s) 263, 659, 690, 1064, 1150, 1508
AjnI CCWGG 2 cut(s) 916, 1236
Alw21I GWGCWC 4 cut(s) 736, 904, 1041, 1089
Alw26I GTCTC 2 cut(s) 977, 1479
AlwI GGATC 2 cut(s) 478, 491
Ama87I CYCGRG 2 cut(s) 881, 1377
AoxI GGCC 9 cut(s) 366, 888, 914, 934, 1052, 1131, 1239, 1290, 1301
ApeKI GCWGC 6 cut(s) 4, 55, 800, 964, 1233, 1420
ApoI RAATTY 7 cut(s) 207, 476, 602, 685, 814, 1103, 1123
AsiGI ACCGGT 1 cut(s) 833
Asp700I GAANNNNTTC 3 cut(s) 23, 368, 708
AspLEI GCGC 2 cut(s) 860, 1016
AspS9I GGNCC 4 cut(s) 665, 760, 952, 1240
AsuC2I CCSGG 2 cut(s) 855, 1311
AsuHPI GGTGA 5 cut(s) 143, 256, 1046, 1415, 1493
AvaI CYCGRG 2 cut(s) 881, 1377
AvaII GGWCC 3 cut(s) 665, 760, 952
AxyI CCTNAGG 1 cut(s) 488
BamHI GGATCC 1 cut(s) 483
BanI GGYRCC 1 cut(s) 1013
BanII GRGCYC 2 cut(s) 1041, 1089
Bbv12I GWGCWC 4 cut(s) 736, 904, 1041, 1089
BbvI GCAGC 6 cut(s) 16, 42, 787, 976, 1245, 1432
BccI CCATC 4 cut(s) 35, 275, 716, 997
BciT130I CCWGG 2 cut(s) 918, 1238
BciVI GTATCC 1 cut(s) 356
BcnI CCSGG 2 cut(s) 855, 1311
BcoDI GTCTC 2 cut(s) 977, 1479
BfaI CTAG 2 cut(s) 314, 1193
BfmI CTRYAG 2 cut(s) 429, 522
BfoI RGCGCY 1 cut(s) 1017
BfuI GTATCC 1 cut(s) 356
BlpI GCTNAGC 1 cut(s) 750
Bme1390I CCNGG 4 cut(s) 855, 918, 1238, 1311
Bme18I GGWCC 3 cut(s) 665, 760, 952
BmeT110I CYCGRG 2 cut(s) 881, 1377
BmgT120I GGNCC 4 cut(s) 665, 760, 952, 1240
BmiI GGNNCC 6 cut(s) 485, 761, 762, 911, 1015, 1242
BmrFI CCNGG 4 cut(s) 855, 918, 1238, 1311
BpmI CTGGAG 1 cut(s) 944
Bpu1102I GCTNAGC 1 cut(s) 750
BpuEI CTTGAG 5 cut(s) 69, 186, 720, 1025, 1461
BpuMI CCSGG 2 cut(s) 855, 1311
BsaHI GRCGYC 2 cut(s) 947, 1014
BsaJI CCNNGG 1 cut(s) 1310
BsaWI WCCGGW 2 cut(s) 833, 1170
BsaXI ACNNNNNCTCC 2 cut(s) 894, 924
Bsc4I CCNNNNNNNGG 8 cut(s) 651, 722, 886, 932, 1098, 1118, 1299, 1310
Bse118I RCCGGY 4 cut(s) 833, 886, 1091, 1111
Bse1I ACTGG 3 cut(s) 645, 1335, 1405
Bse21I CCTNAGG 1 cut(s) 488
Bse3DI GCAATG 2 cut(s) 1440, 1529
BseBI CCWGG 2 cut(s) 918, 1238
BseDI CCNNGG 1 cut(s) 1310
BseGI GGATG 3 cut(s) 46, 1321, 1339
BseLI CCNNNNNNNGG 8 cut(s) 651, 722, 886, 932, 1098, 1118, 1299, 1310
BseMI GCAATG 2 cut(s) 1440, 1529
BseMII CTCAG 4 cut(s) 502, 582, 741, 984
BseNI ACTGG 3 cut(s) 645, 1335, 1405
BseRI GAGGAG 2 cut(s) 969, 1243
BseX3I CGGCCG 1 cut(s) 888
BseXI GCAGC 6 cut(s) 16, 42, 787, 976, 1245, 1432
Bsh1236I CGCG 1 cut(s) 1543
Bsh1285I CGRYCG 1 cut(s) 891
BshFI GGCC 9 cut(s) 368, 890, 916, 936, 1054, 1133, 1241, 1292, 1303
BshNI GGYRCC 1 cut(s) 1013
BshTI ACCGGT 1 cut(s) 833
BsiEI CGRYCG 1 cut(s) 891
BsiHKAI GWGCWC 4 cut(s) 736, 904, 1041, 1089
BsiHKCI CYCGRG 2 cut(s) 881, 1377
BslFI GGGAC 2 cut(s) 311, 773
BslI CCNNNNNNNGG 8 cut(s) 651, 722, 886, 932, 1098, 1118, 1299, 1310
BsmAI GTCTC 2 cut(s) 977, 1479
BsmBI CGTCTC 1 cut(s) 977
BsmFI GGGAC 2 cut(s) 311, 773
BsmI GAATGC 2 cut(s) 25, 90
BsnI GGCC 9 cut(s) 368, 890, 916, 936, 1054, 1133, 1241, 1292, 1303
BsoBI CYCGRG 2 cut(s) 881, 1377
Bsp1286I GDGCHC 4 cut(s) 736, 904, 1041, 1089
Bsp143I GATC 2 cut(s) 184, 483
Bsp1720I GCTNAGC 1 cut(s) 750
BspANI GGCC 9 cut(s) 368, 890, 916, 936, 1054, 1133, 1241, 1292, 1303
BspCNI CTCAG 4 cut(s) 501, 583, 742, 985
BspFNI CGCG 1 cut(s) 1543
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 6 cut(s) 485, 761, 762, 911, 1015, 1242
BspMAI CTGCAG 1 cut(s) 526
BspPI GGATC 2 cut(s) 478, 491
BspQI GCTCTTC 1 cut(s) 14
BspT107I GGYRCC 1 cut(s) 1013
BsrDI GCAATG 2 cut(s) 1440, 1529
BsrFI RCCGGY 4 cut(s) 833, 886, 1091, 1111
BsrI ACTGG 3 cut(s) 645, 1335, 1405
BssAI RCCGGY 4 cut(s) 833, 886, 1091, 1111
BssECI CCNNGG 1 cut(s) 1310
BssMI GATC 2 cut(s) 184, 483
BssNI GRCGYC 2 cut(s) 947, 1014
Bst2UI CCWGG 2 cut(s) 918, 1238
Bst4CI ACNGT 3 cut(s) 1146, 1391, 1473
Bst6I CTCTTC 2 cut(s) 14, 1220
BstACI GRCGYC 2 cut(s) 947, 1014
BstAPI GCANNNNNTGC 2 cut(s) 68, 412
BstC8I GCNNGC 3 cut(s) 60, 888, 1089
BstDEI CTNAG 4 cut(s) 488, 591, 750, 993
BstF5I GGATG 3 cut(s) 46, 1321, 1339
BstFNI CGCG 1 cut(s) 1543
BstH2I RGCGCY 1 cut(s) 1017
BstHHI GCGC 2 cut(s) 860, 1016
BstKTI GATC 2 cut(s) 187, 486
BstMAI GTCTC 2 cut(s) 977, 1479
BstMBI GATC 2 cut(s) 184, 483
BstMCI CGRYCG 1 cut(s) 891
BstMWI GCNNNNNNNGC 3 cut(s) 68, 412, 1509
BstNI CCWGG 2 cut(s) 918, 1238
BstNSI RCATGY 2 cut(s) 273, 1465
BstSCI CCNGG 4 cut(s) 853, 916, 1236, 1309
BstSFI CTRYAG 2 cut(s) 429, 522
BstUI CGCG 1 cut(s) 1543
BstV1I GCAGC 6 cut(s) 16, 42, 787, 976, 1245, 1432
BstX2I RGATCY 1 cut(s) 483
BstYI RGATCY 1 cut(s) 483
BstZI CGGCCG 1 cut(s) 888
Bsu36I CCTNAGG 1 cut(s) 488
BsuI GTATCC 1 cut(s) 356
BsuRI GGCC 9 cut(s) 368, 890, 916, 936, 1054, 1133, 1241, 1292, 1303
BtgZI GCGATG 1 cut(s) 1524
BtsCI GGATG 3 cut(s) 46, 1321, 1339
BtsI GCAGTG 1 cut(s) 733
BtsIMutI CAGTG 3 cut(s) 652, 733, 1398
Cac8I GCNNGC 3 cut(s) 60, 888, 1089
CciI TCATGA 1 cut(s) 546
CfoI GCGC 2 cut(s) 860, 1016
Cfr10I RCCGGY 4 cut(s) 833, 886, 1091, 1111
Cfr13I GGNCC 4 cut(s) 665, 760, 952, 1240
CseI GACGC 3 cut(s) 412, 955, 1532
Csp6I GTAC 2 cut(s) 74, 395
CspAI ACCGGT 1 cut(s) 833
CviQI GTAC 2 cut(s) 74, 395
DdeI CTNAG 4 cut(s) 488, 591, 750, 993
DinI GGCGCC 1 cut(s) 1015
DpnI GATC 2 cut(s) 186, 485
DpnII GATC 2 cut(s) 184, 483
DraI TTTAAA 2 cut(s) 171, 1468
EaeI YGGCCR 5 cut(s) 888, 934, 1131, 1290, 1301
EagI CGGCCG 1 cut(s) 888
Eam1104I CTCTTC 2 cut(s) 14, 1220
EarI CTCTTC 2 cut(s) 14, 1220
EciI GGCGGA 1 cut(s) 915
Ecl136II GAGCTC 2 cut(s) 1039, 1087
EclXI CGGCCG 1 cut(s) 888
Eco147I AGGCCT 2 cut(s) 368, 1054
Eco24I GRGCYC 2 cut(s) 1041, 1089
Eco47I GGWCC 3 cut(s) 665, 760, 952
Eco52I CGGCCG 1 cut(s) 888
Eco53kI GAGCTC 2 cut(s) 1039, 1087
Eco57I CTGAAG 1 cut(s) 1325
Eco81I CCTNAGG 1 cut(s) 488
Eco88I CYCGRG 2 cut(s) 881, 1377
EcoICRI GAGCTC 2 cut(s) 1039, 1087
EcoO109I RGGNCCY 3 cut(s) 665, 760, 1240
EcoRI GAATTC 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 916, 1236
EcoT22I ATGCAT 3 cut(s) 232, 342, 627
EcoT38I GRGCYC 2 cut(s) 1041, 1089
EgeI GGCGCC 1 cut(s) 1015
EheI GGCGCC 1 cut(s) 1015
Esp3I CGTCTC 1 cut(s) 977
FalI AAGNNNNNCTT 2 cut(s) 243, 275
FaqI GGGAC 2 cut(s) 311, 773
FblI GTMKAC 1 cut(s) 1161
FokI GGATG 3 cut(s) 53, 1328, 1346
FriOI GRGCYC 2 cut(s) 1041, 1089
FspBI CTAG 2 cut(s) 314, 1193
GlaI GCGC 2 cut(s) 859, 1015
GsuI CTGGAG 1 cut(s) 944
HaeII RGCGCY 1 cut(s) 1017
HaeIII GGCC 9 cut(s) 368, 890, 916, 936, 1054, 1133, 1241, 1292, 1303
HgaI GACGC 3 cut(s) 412, 955, 1532
HhaI GCGC 2 cut(s) 860, 1016
Hin1I GRCGYC 2 cut(s) 947, 1014
Hin6I GCGC 2 cut(s) 858, 1014
HinP1I GCGC 2 cut(s) 858, 1014
HincII GTYRAC 1 cut(s) 1162
HindII GTYRAC 1 cut(s) 1162
HindIII AAGCTT 1 cut(s) 461
HinfI GANTC 2 cut(s) 655, 1046
HphI GGTGA 5 cut(s) 143, 256, 1046, 1415, 1493
Hpy166II GTNNAC 2 cut(s) 191, 1162
Hpy188I TCNGA 8 cut(s) 303, 357, 513, 584, 984, 994, 1183, 1570
Hpy188III TCNNGA 8 cut(s) 203, 547, 640, 659, 1099, 1119, 1343, 1377
Hpy8I GTNNAC 2 cut(s) 191, 1162
Hpy99I CGWCG 2 cut(s) 949, 1078
HpyCH4III ACNGT 3 cut(s) 1146, 1391, 1473
HpyCH4IV ACGT 3 cut(s) 34, 1073, 1488
HpyCH4V TGCA 9 cut(s) 4, 230, 269, 340, 455, 524, 625, 1006, 1522
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 412, 1509
HpyF3I CTNAG 4 cut(s) 488, 591, 750, 993
HpySE526I ACGT 3 cut(s) 34, 1073, 1488
Hsp92I GRCGYC 2 cut(s) 947, 1014
HspAI GCGC 2 cut(s) 858, 1014
KasI GGCGCC 1 cut(s) 1013
KflI GGGWCCC 1 cut(s) 760
KroI GCCGGC 1 cut(s) 886
KroNI GCCGGC 1 cut(s) 888
Kzo9I GATC 2 cut(s) 184, 483
LguI GCTCTTC 1 cut(s) 14
LmnI GCTCC 5 cut(s) 383, 915, 1230, 1345, 1430
Lsp1109I GCAGC 6 cut(s) 16, 42, 787, 976, 1245, 1432
MaeI CTAG 2 cut(s) 314, 1193
MaeII ACGT 3 cut(s) 34, 1073, 1488
MaeIII GTNAC 4 cut(s) 196, 637, 1195, 1573
MalI GATC 2 cut(s) 186, 485
MboI GATC 2 cut(s) 184, 483
MboII GAAGA 4 cut(s) 248, 500, 562, 1237
MflI RGATCY 1 cut(s) 483
MhlI GDGCHC 4 cut(s) 736, 904, 1041, 1089
Mly113I GGCGCC 1 cut(s) 1014
MmeI TCCRAC 1 cut(s) 740
Mph1103I ATGCAT 3 cut(s) 232, 342, 627
MroNI GCCGGC 1 cut(s) 886
MroXI GAANNNNTTC 3 cut(s) 23, 368, 708
MseI TTAA 3 cut(s) 170, 417, 1467
MspR9I CCNGG 4 cut(s) 855, 918, 1238, 1311
MssI GTTTAAAC 1 cut(s) 1468
Mva1269I GAATGC 2 cut(s) 25, 90
MvaI CCWGG 2 cut(s) 918, 1238
MvnI CGCG 1 cut(s) 1543
MwoI GCNNNNNNNGC 3 cut(s) 68, 412, 1509
NaeI GCCGGC 1 cut(s) 888
NarI GGCGCC 1 cut(s) 1014
NciI CCSGG 2 cut(s) 855, 1311
NdeII GATC 2 cut(s) 184, 483
NgoMIV GCCGGC 1 cut(s) 886
NlaIV GGNNCC 6 cut(s) 485, 761, 762, 911, 1015, 1242
NmuCI GTSAC 1 cut(s) 637
NsiI ATGCAT 3 cut(s) 232, 342, 627
NspI RCATGY 2 cut(s) 273, 1465
PaeR7I CTCGAG 1 cut(s) 1377
PagI TCATGA 1 cut(s) 546
PceI AGGCCT 2 cut(s) 368, 1054
PciI ACATGT 1 cut(s) 1461
PciSI GCTCTTC 1 cut(s) 14
PctI GAATGC 2 cut(s) 25, 90
PdiI GCCGGC 1 cut(s) 888
PdmI GAANNNNTTC 3 cut(s) 23, 368, 708
PfeI GAWTC 2 cut(s) 655, 1046
PflMI CCANNNNNTGG 1 cut(s) 722
PinAI ACCGGT 1 cut(s) 833
PluTI GGCGCC 1 cut(s) 1017
PmeI GTTTAAAC 1 cut(s) 1468
PpuMI RGGWCCY 2 cut(s) 665, 760
PscI ACATGT 1 cut(s) 1461
PsiI TTATAA 1 cut(s) 225
Psp124BI GAGCTC 2 cut(s) 1041, 1089
Psp5II RGGWCCY 2 cut(s) 665, 760
Psp6I CCWGG 2 cut(s) 916, 1236
PspGI CCWGG 2 cut(s) 916, 1236
PspN4I GGNNCC 6 cut(s) 485, 761, 762, 911, 1015, 1242
PspPI GGNCC 4 cut(s) 665, 760, 952, 1240
PspPPI RGGWCCY 2 cut(s) 665, 760
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 1 cut(s) 483
RsaI GTAC 2 cut(s) 75, 396
RsaNI GTAC 2 cut(s) 74, 395
SacI GAGCTC 2 cut(s) 1041, 1089
SalI GTCGAC 1 cut(s) 1160
SapI GCTCTTC 1 cut(s) 14
SaqAI TTAA 3 cut(s) 170, 417, 1467
Sau3AI GATC 2 cut(s) 184, 483
Sau96I GGNCC 4 cut(s) 665, 760, 952, 1240
ScrFI CCNGG 4 cut(s) 855, 918, 1238, 1311
SduI GDGCHC 4 cut(s) 736, 904, 1041, 1089
SfcI CTRYAG 2 cut(s) 429, 522
SfoI GGCGCC 1 cut(s) 1015
Sfr274I CTCGAG 1 cut(s) 1377
SinI GGWCC 3 cut(s) 665, 760, 952
SlaI CTCGAG 1 cut(s) 1377
SmlI CTYRAG 6 cut(s) 84, 201, 735, 1040, 1377, 1476
SmoI CTYRAG 6 cut(s) 84, 201, 735, 1040, 1377, 1476
SseBI AGGCCT 2 cut(s) 368, 1054
SspDI GGCGCC 1 cut(s) 1013
SspI AATATT 1 cut(s) 379
SspMI CTAG 2 cut(s) 314, 1193
SstI GAGCTC 2 cut(s) 1041, 1089
StuI AGGCCT 2 cut(s) 368, 1054
StyD4I CCNGG 4 cut(s) 853, 916, 1236, 1309
TaaI ACNGT 3 cut(s) 1146, 1391, 1473
TaiI ACGT 3 cut(s) 37, 1076, 1491
TaqI TCGA 5 cut(s) 1049, 1076, 1083, 1161, 1378
TauI GCSGC 6 cut(s) 696, 1014, 1019, 1269, 1272, 1292
TfiI GAWTC 2 cut(s) 655, 1046
Tru1I TTAA 3 cut(s) 170, 417, 1467
Tru9I TTAA 3 cut(s) 170, 417, 1467
TscAI CASTG 3 cut(s) 652, 733, 1405
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 6 cut(s) 4, 55, 800, 964, 1233, 1420
Tsp45I GTSAC 1 cut(s) 637
TspDTI ATGAA 8 cut(s) 108, 320, 361, 423, 563, 1129, 1451, 1549
TspGWI ACGGA 1 cut(s) 919
TspRI CASTG 3 cut(s) 652, 733, 1405
Van91I CCANNNNNTGG 1 cut(s) 722
VpaK11BI GGWCC 3 cut(s) 665, 760, 952
XapI RAATTY 7 cut(s) 207, 476, 602, 685, 814, 1103, 1123
XceI RCATGY 2 cut(s) 273, 1465
XhoI CTCGAG 1 cut(s) 1377
XmiI GTMKAC 1 cut(s) 1161
XmnI GAANNNNTTC 3 cut(s) 23, 368, 708
XspI CTAG 2 cut(s) 314, 1193
Zsp2I ATGCAT 3 cut(s) 232, 342, 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.