Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0000225

Physical Location & Seq

Genomic Coordinates Forward (+)

7832122 .. 7838030

Gene Structure 5909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g06680.18

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGATAAAGACACACCCCTTTAAGCTTCTCAAATACCCTTATAAACATTTTAGGTCGAACATGATCAACCACCAAGAATATCAATATTGCCCTCAATTTAACCACTTATTACTAGGTGAGGATTTTATCACAGCATGCCTCGTTGATATTAAAAGTTACGAAACACTCCAGAGAGCAAGTACTCCACCAAACTCCGTCTACCATTATAAATGCAATGCCAGTTATTCCTCACCGATCTACAAGACATGGTCCATGGATTTCATAGTGAAGGTTGAGGAATCGAGGCCGGCCGCCAACGGGAGGCCGGCGGCGGGGCCGGCGTATCGGAGCATTTACGCTAAGGATGGTCTCATGGAGCTGCCGGAGGGGTTGGAGTCTCCTTGGCAGTTTTTGAGCGACTCTGCTAAGAAATATCCGAGCAACCCAATGCTTGGGCGGCGGCAGGTCACCGACACAAAGGTGGGTCCGTATCTGTGGCTTACGTATCAAGAGGTTTATGATGCTGCGATTCGAATGGGTTCAGCCATCAGAAGCCGCGGTGTCAATCCTGGAGATCGTTGCGGTATATACGGATCAAACTGCCCCCAGTGGCTTACTGCAATGGAGGCCTGTAATAGCCAAGCCATAACATACGTTCCACTCTATGACACCCTTGGTGCTAATGCAGTTGAGTTCATCATCAATCATGCTGAAGTTTCAATAGCTTTTGTTCAAGAAAACAAACTCCCTGCTGTTCTGTCATGCCTTCCAAATTGTTCTACCAATTTAAAAACAATTGTCAGCTTTGCAAGTGTTTCTAGCGCTCAAAAGGAGGAAGCTGAAGGACTGGGGGTATCTTGTTTTTCTTGGGAGGAATTCTCTCAGTTGGGAAATGCAGCTTGTGAACTACCTCCGAAACGGAGGACTGACATTTGCACAATAATGTATACAAGTGGAACAACTGGAGAACCAAAAGGTGTACGTATTAGTAATGGAGCAATTATGGCAGAAGTATTGTCTGTGGAGCAACTACTTTTTCTAACAGATAGAGTGTGTACGGAAGAAGATTCATATTTTTCCTTTCTTCCATTGGCCCATATATATGATCAAATAATGGAGAGCTATTGCATCTACAAAGGATCCTCTGTAGGCTTCTGGCGAGGAGATGTCAGATTTCTACTCGAGGACCTTCAGGAACTAAGGCCTACTATGTTTTGTGGGGTACCTAGAGTGTATGATCGCATATACTCTGGTATTGTCAACAAAGTTTCATCCGGGGGTGTATTGAAGAAGACATTATTCCAATATGCTTACAACTACAAGTTGGCGAATCTGGAAAAGGGTCTCCCACAAGAAAAAGCAGCACCTCTCTTGGACAAACTTGTTTTTGATAAGATAAAACAAGCATTGGGGGGACGAGTTCGTATATTGTTGTCTGGTGCTGCCCCTTTGCCTAGGCATGTGGAGGAATTTTTGAGGGTCACCAGCTGCAGCACTTTATCACAAGGATATGGCCTTACTGAAAGCTGTGGTGGTAGCTTCACGTCCATTGGCAATGTTTTTCCTATGATTGGAACTGTCGGTGTCCCTATCACAACTATTGAAGCAAGGCTTGAGTCAGTGCCGGAAATGGGATACGATGCACTTTCCAGTGTGCCCCGTGGAGAGATTTGCCTGAGAGGAACAACCTTGTTTTCTGGTTACCATAAGCGAGAAGATCTAACAGAGGAAGTCCTTGTTGATGGGTGGTTTCATACAGGTGACATTGGAGAATGGCAGGCAGATGGAGCAATGAAAATCATAGATAGGAAAAAGAATATATTTAAACTATCGCAAGGTGAATATGTTGCGGTAGAAAACATTGAAAGCAAATACTTGCAATGCCCTCTTATCACATCGATTTGGGTATATGGAAACAGCTTTGAGTCGTTTCTTGTTGCTGTGGTGGTCCCTGATCCTAAGGCGTTGGAGGATTGGGCAGCAGAGCATCACTTGACCGATGATTTCAAATCATTATGTCAAAACCCGAAGGCAAGCAAGTACATTTTGGATGAGCTCAATAGTACTGGTCAGAAACAGCAACTCCGAGGTTTTGAGCTGTTAAAAGCGGTTCACTTGGAACCGAAGCCCTTTGACATGGAGAGGGATCTCATTACTCCAACATTCAAACTGAAGAGACCACAGCTGCTTAAATATTACAAGGACCGTATTGATACACTGTACAGTGAAGGAAAAGGAGCAAGGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010143 GO:0010311 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0022622 GO:0030054 GO:0031957 GO:0032501 GO:0032502 GO:0032787 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0098542 GO:0099402 GO:1901576 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

743

Amino Acids

83.24

Weight (kDa)

6.29

Isoelectric Point (pI)

42.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49430 AT1G49430
fragaria_vesca	FvH4_2g07450 FvH4_2g07450 FvH4_2g07450 FvH4_6g05950 FvH4_6g05960
malus_domestica	MD05G1070800.v1.1 MD10G1085200.v1.1 MD10G1085400.v1.1
prunus_persica	Prupe.8G108400_v2.0.a1 Prupe.8G108600_v2.0.a1 Prupe.8G108900_v2.0.a1
pyrus_communis	pycom10g06680
rosa_chinensis	RchiOBHm_Chr0c38g0502991 RchiOBHm_Chr0c38g0503001 RchiOBHm_Chr0c38g0503011 RchiOBHm_Chr0c38g0503031 RchiOBHm_Chr1g0351481 RchiOBHm_Chr6g0261071 RchiOBHm_Chr6g0261081 RchiOBHm_Chr6g0261101 RchiOBHm_Chr6g0261171 RchiOBHm_Chr6g0261181 RchiOBHm_Chr6g0261201 RchiOBHm_Chr6g0261211 RchiOBHm_Chr6g0261271 RchiOBHm_Chr6g0261291 RchiOBHm_Chr6g0261301 RchiOBHm_Chr6g0261311 RchiOBHm_Chr6g0261431 RchiOBHm_Chr6g0261521 RchiOBHm_Chr6g0261591 RchiOBHm_Chr6g0261601 RchiOBHm_Chr6g0261611 RchiOBHm_Chr6g0261621 RchiOBHm_Chr6g0261631 RchiOBHm_Chr6g0261651 RchiOBHm_Chr6g0261671 RchiOBHm_Chr6g0261761 RchiOBHm_Chr6g0261791 RchiOBHm_Chr6g0261801 RchiOBHm_Chr6g0261891 RchiOBHm_Chr6g0261911 RchiOBHm_Chr6g0261921 RchiOBHm_Chr6g0261931 RchiOBHm_Chr6g0261951 RchiOBHm_Chr6g0261961 RchiOBHm_Chr6g0261981 RchiOBHm_Chr6g0262641 RchiOBHm_Chr6g0262661 RchiOBHm_Chr6g0262711 RchiOBHm_Chr6g0262721 RchiOBHm_Chr6g0262801 RchiOBHm_Chr6g0262811 RchiOBHm_Chr6g0262821 RchiOBHm_Chr6g0262831 RchiOBHm_Chr6g0262871 RchiOBHm_Chr6g0262881 RchiOBHm_Chr6g0267811
rosa_laevigata	RLG00000014207 RLG00000014410 RLG00000014461 RLG00000014462 RLG00000014463 RLG00000030683
rosa_multiflora	Rmu_co8313283.1_g000002 Rmu_sc0000596.1_g000052 Rmu_sc0001833.1_g000009 Rmu_sc0003487.1_g000003 Rmu_sc0003487.1_g000007 Rmu_sc0004766.1_g000001 Rmu_sc0005237.1_g000021 Rmu_sc0006655.1_g000001 Rmu_sc0015236.1_g000003 Rmu_sc0015236.1_g000004 Rmu_sc0028652.1_g000010 Rmu_sc0031142.1_g000001 Rmu_sc0036063.1_g000001 Rmu_ssc0000359.1_g000047 Rmu_ssc0000359.1_g000054 Rmu_ssc0000359.1_g000058 Rmu_ssc0000359.1_g000060
rosa_roxburghii	Rroxscaffold_175G00432240 Rroxscaffold_177G00434140 Rroxscaffold_177G00434220 Rroxscaffold_2G00103180 Rroxscaffold_2G00103450 Rroxscaffold_4G00314540 Rroxscaffold_7G00202920 Rroxscaffold_7G00202940 Rroxscaffold_7G00207640 Rroxscaffold_7G00207650 Rroxscaffold_7G00207670 Rroxscaffold_7G00207690 Rroxscaffold_7G00207700 Rroxscaffold_7G00207720
rosa_rugosa	Rorug05G0594700 Rorug05G0594900 Rorug06G0013300 Rorug07G0072100
rosa_samantha	Rh4AG177500 Rh5AG318000 Rh6AG114200 Rh6AG120600 Rh6AG137000 Rh6AG137100 Rh6AG161100 Rh6BG107900 Rh6BG108000 Rh6BG108200 Rh6BG108300 Rh6BG108400 Rh6BG113800 Rh6BG134400 Rh6BG134500 Rh6BG134600 Rh6BG134700 Rh6BG134900 Rh6BG135100 Rh6BG135300 Rh6BG135400 Rh6CG105000 Rh6CG105100 Rh6CG105500 Rh6CG105600 Rh6CG105700 Rh6CG105800 Rh6CG111800 Rh6CG132500 Rh6CG132900 Rh6CG133000 Rh6CG133200 Rh6CG133400 Rh6CG133500 Rh6CG133600 Rh6CG133700 Rh6CG133800 Rh6CG152600 Rh6CG159000 Rh6DG120200
rosa_wichuraiana	Rw0G012740 Rw6G002860 Rw6G009790 Rw6G010330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	42, 207
Acc36I	ACCTGC	1 cut(s)	433
Acc65I	GGTACC	1 cut(s)	1201
AccB1I	GGYRCC	1 cut(s)	1201
AccB7I	CCANNNNNTGG	1 cut(s)	431
AccI	GTMKAC	2 cut(s)	198, 926
AccII	CGCG	1 cut(s)	537
AclWI	GGATC	5 cut(s)	580, 1113, 1126, 1928, 2133
AcoI	YGGCCR	1 cut(s)	288
AcsI	RAATTY	2 cut(s)	854, 1448
AcuI	CTGAAG	4 cut(s)	711, 840, 1154, 2171
AfaI	GTAC	7 cut(s)	181, 960, 1036, 1203, 2021, 2044, 2201
AfeI	AGCGCT	1 cut(s)	802
AfiI	CCNNNNNNNGG	6 cut(s)	297, 300, 311, 431, 1550, 1610
AgsI	TTSAA	7 cut(s)	699, 713, 1267, 1583, 1844, 1987, 2146
AjiI	CACGTC	1 cut(s)	1524
AjnI	CCWGG	1 cut(s)	547
AleI	CACNNNNGTG	1 cut(s)	458
Alw21I	GWGCWC	1 cut(s)	2037
Alw26I	GTCTC	4 cut(s)	353, 381, 1328, 2149
AlwI	GGATC	5 cut(s)	580, 1113, 1126, 1928, 2133
Ama87I	CYCGRG	1 cut(s)	1160
Aor51HI	AGCGCT	1 cut(s)	802
AoxI	GGCC	8 cut(s)	284, 288, 302, 314, 606, 1071, 1181, 1492
ApeKI	GCWGC	9 cut(s)	358, 503, 875, 1340, 1421, 1467, 1470, 1958, 2164
ApoI	RAATTY	2 cut(s)	854, 1448
Asp700I	GAANNNNTTC	1 cut(s)	517
Asp718I	GGTACC	1 cut(s)	1201
AspA2I	CCTAGG	1 cut(s)	1433
AspLEI	GCGC	1 cut(s)	803
AspS9I	GGNCC	7 cut(s)	249, 314, 464, 1072, 1165, 1927, 2182
AsuC2I	CCSGG	1 cut(s)	1255
AsuHPI	GGTGA	6 cut(s)	128, 222, 439, 1453, 1751, 1829
AsuII	TTCGAA	1 cut(s)	511
AvaI	CYCGRG	1 cut(s)	1160
AvaII	GGWCC	5 cut(s)	249, 464, 1165, 1927, 2182
AvrII	CCTAGG	1 cut(s)	1433
AxyI	CCTNAGG	1 cut(s)	1938
BaeGI	GKGCMC	1 cut(s)	1638
BamHI	GGATCC	1 cut(s)	1118
BanI	GGYRCC	1 cut(s)	1201
BanII	GRGCYC	1 cut(s)	2037
BbsI	GAAGAC	1 cut(s)	1277
Bbv12I	GWGCWC	1 cut(s)	2037
BbvI	GCAGC	9 cut(s)	345, 490, 887, 1352, 1408, 1454, 1482, 1970, 2151
BccI	CCATC	4 cut(s)	338, 533, 1715, 1757
BciT130I	CCWGG	1 cut(s)	549
BciVI	GTATCC	1 cut(s)	1607
BclI	TGATCA	2 cut(s)	63, 1084
BcnI	CCSGG	1 cut(s)	1255
BcoDI	GTCTC	4 cut(s)	353, 381, 1328, 2149
BfaI	CTAG	4 cut(s)	113, 798, 1206, 1434
BfmI	CTRYAG	2 cut(s)	1125, 1468
BfoI	RGCGCY	1 cut(s)	804
BfuAI	ACCTGC	1 cut(s)	433
BfuI	GTATCC	1 cut(s)	1607
BglII	AGATCT	1 cut(s)	1696
BlnI	CCTAGG	1 cut(s)	1433
BmcAI	AGTACT	2 cut(s)	181, 2044
Bme1390I	CCNGG	2 cut(s)	549, 1255
Bme18I	GGWCC	5 cut(s)	249, 464, 1165, 1927, 2182
BmeT110I	CYCGRG	1 cut(s)	1160
BmgBI	CACGTC	1 cut(s)	1524
BmgT120I	GGNCC	7 cut(s)	249, 314, 464, 1072, 1165, 1927, 2182
BmiI	GGNNCC	6 cut(s)	315, 465, 1120, 1203, 1929, 2100
BmrFI	CCNGG	2 cut(s)	549, 1255
BmrI	ACTGGG	2 cut(s)	580, 836
BmsI	GCATC	4 cut(s)	490, 1116, 1609, 1975
BmuI	ACTGGG	2 cut(s)	580, 836
BpiI	GAAGAC	1 cut(s)	1277
BplI	GAGNNNNNCTC	2 cut(s)	842, 874
BpmI	CTGGAG	3 cut(s)	152, 570, 963
Bpu10I	CCTNAGC	1 cut(s)	339
Bpu14I	TTCGAA	1 cut(s)	511
BpuEI	CTTGAG	1 cut(s)	1613
BpuMI	CCSGG	1 cut(s)	1255
Bsa29I	ATCGAT	1 cut(s)	1877
BsaAI	YACGTR	2 cut(s)	483, 962
BsaI	GGTCTC	3 cut(s)	353, 1328, 2149
BsaJI	CCNNGG	8 cut(s)	252, 380, 535, 652, 1254, 1433, 1639, 2065
BsaXI	ACNNNNNCTCC	3 cut(s)	2046, 2076, 2208
Bsc4I	CCNNNNNNNGG	6 cut(s)	297, 300, 311, 431, 1550, 1610
Bse118I	RCCGGY	3 cut(s)	286, 304, 316
Bse1I	ACTGG	6 cut(s)	219, 586, 831, 946, 1629, 2050
Bse21I	CCTNAGG	1 cut(s)	1938
Bse3DI	GCAATG	5 cut(s)	220, 606, 1540, 1776, 1865
BseBI	CCWGG	1 cut(s)	549
BseCI	ATCGAT	1 cut(s)	1877
BseDI	CCNNGG	8 cut(s)	252, 380, 535, 652, 1254, 1433, 1639, 2065
BseGI	GGATG	3 cut(s)	349, 1250, 2035
BseLI	CCNNNNNNNGG	6 cut(s)	297, 300, 311, 431, 1550, 1610
BseMI	GCAATG	5 cut(s)	220, 606, 1540, 1776, 1865
BseMII	CTCAG	2 cut(s)	875, 1646
BseNI	ACTGG	6 cut(s)	219, 586, 831, 946, 1629, 2050
BseRI	GAGGAG	1 cut(s)	1155
BseSI	GKGCMC	1 cut(s)	1638
BseX3I	CGGCCG	1 cut(s)	288
BseXI	GCAGC	9 cut(s)	345, 490, 887, 1352, 1408, 1454, 1482, 1970, 2151
Bsh1236I	CGCG	1 cut(s)	537
Bsh1285I	CGRYCG	1 cut(s)	291
BshFI	GGCC	8 cut(s)	286, 290, 304, 316, 608, 1073, 1183, 1494
BshNI	GGYRCC	1 cut(s)	1201
BshVI	ATCGAT	1 cut(s)	1877
BsiEI	CGRYCG	1 cut(s)	291
BsiHKAI	GWGCWC	1 cut(s)	2037
BsiHKCI	CYCGRG	1 cut(s)	1160
BsiSI	CCGG	6 cut(s)	287, 305, 317, 362, 1254, 1604
BslFI	GGGAC	3 cut(s)	1407, 1550, 1913
BslI	CCNNNNNNNGG	6 cut(s)	297, 300, 311, 431, 1550, 1610
BsmAI	GTCTC	4 cut(s)	353, 381, 1328, 2149
BsmFI	GGGAC	3 cut(s)	1407, 1550, 1913
BsnI	GGCC	8 cut(s)	286, 290, 304, 316, 608, 1073, 1183, 1494
Bso31I	GGTCTC	3 cut(s)	353, 1328, 2149
BsoBI	CYCGRG	1 cut(s)	1160
Bsp119I	TTCGAA	1 cut(s)	511
Bsp1286I	GDGCHC	2 cut(s)	1638, 2037
Bsp1407I	TGTACA	1 cut(s)	2199
Bsp19I	CCATGG	1 cut(s)	252
BspANI	GGCC	8 cut(s)	286, 290, 304, 316, 608, 1073, 1183, 1494
BspCNI	CTCAG	2 cut(s)	874, 1647
BspDI	ATCGAT	1 cut(s)	1877
BspFNI	CGCG	1 cut(s)	537
BspLI	GGNNCC	6 cut(s)	315, 465, 1120, 1203, 1929, 2100
BspMAI	CTGCAG	1 cut(s)	1472
BspMI	ACCTGC	1 cut(s)	433
BspPI	GGATC	5 cut(s)	580, 1113, 1126, 1928, 2133
BspT104I	TTCGAA	1 cut(s)	511
BspT107I	GGYRCC	1 cut(s)	1201
BspTNI	GGTCTC	3 cut(s)	353, 1328, 2149
BsrDI	GCAATG	5 cut(s)	220, 606, 1540, 1776, 1865
BsrFI	RCCGGY	3 cut(s)	286, 304, 316
BsrGI	TGTACA	1 cut(s)	2199
BsrI	ACTGG	6 cut(s)	219, 586, 831, 946, 1629, 2050
BssAI	RCCGGY	3 cut(s)	286, 304, 316
BssECI	CCNNGG	8 cut(s)	252, 380, 535, 652, 1254, 1433, 1639, 2065
BssNAI	GTATAC	1 cut(s)	927
BssT1I	CCWWGG	4 cut(s)	252, 380, 652, 1433
Bst1107I	GTATAC	1 cut(s)	927
Bst2UI	CCWGG	1 cut(s)	549
Bst4CI	ACNGT	4 cut(s)	1558, 2186, 2199, 2204
Bst6I	CTCTTC	1 cut(s)	2147
BstAUI	TGTACA	1 cut(s)	2199
BstBAI	YACGTR	2 cut(s)	483, 962
BstBI	TTCGAA	1 cut(s)	511
BstC8I	GCNNGC	6 cut(s)	136, 288, 306, 318, 1758, 2014
BstDEI	CTNAG	6 cut(s)	339, 405, 861, 1178, 1655, 1938
BstDSI	CCRYGG	3 cut(s)	252, 535, 1639
BstEII	GGTNACC	3 cut(s)	445, 1459, 1679
BstF5I	GGATG	3 cut(s)	349, 1250, 2035
BstFNI	CGCG	1 cut(s)	537
BstH2I	RGCGCY	1 cut(s)	804
BstHHI	GCGC	1 cut(s)	803
BstMAI	GTCTC	4 cut(s)	353, 381, 1328, 2149
BstMCI	CGRYCG	1 cut(s)	291
BstMWI	GCNNNNNNNGC	5 cut(s)	317, 436, 605, 983, 1766
BstNI	CCWGG	1 cut(s)	549
BstNSI	RCATGY	2 cut(s)	138, 1442
BstPI	GGTNACC	3 cut(s)	445, 1459, 1679
BstSCI	CCNGG	2 cut(s)	547, 1253
BstSFI	CTRYAG	2 cut(s)	1125, 1468
BstSLI	GKGCMC	1 cut(s)	1638
BstSNI	TACGTA	2 cut(s)	483, 962
BstUI	CGCG	1 cut(s)	537
BstV1I	GCAGC	9 cut(s)	345, 490, 887, 1352, 1408, 1454, 1482, 1970, 2151
BstV2I	GAAGAC	1 cut(s)	1277
BstX2I	RGATCY	3 cut(s)	1118, 1696, 2125
BstYI	RGATCY	3 cut(s)	1118, 1696, 2125
BstZ17I	GTATAC	1 cut(s)	927
BstZI	CGGCCG	1 cut(s)	288
Bsu15I	ATCGAT	1 cut(s)	1877
Bsu36I	CCTNAGG	1 cut(s)	1938
BsuI	GTATCC	1 cut(s)	1607
BsuRI	GGCC	8 cut(s)	286, 290, 304, 316, 608, 1073, 1183, 1494
BsuTUI	ATCGAT	1 cut(s)	1877
BtgI	CCRYGG	3 cut(s)	252, 535, 1639
BtrI	CACGTC	1 cut(s)	1524
BtsCI	GGATG	3 cut(s)	349, 1250, 2035
BtsIMutI	CAGTG	5 cut(s)	593, 1605, 1636, 2195, 2209
BveI	ACCTGC	1 cut(s)	433
Cac8I	GCNNGC	6 cut(s)	136, 288, 306, 318, 1758, 2014
CfoI	GCGC	1 cut(s)	803
Cfr10I	RCCGGY	3 cut(s)	286, 304, 316
Cfr13I	GGNCC	7 cut(s)	249, 314, 464, 1072, 1165, 1927, 2182
Cfr42I	CCGCGG	1 cut(s)	538
ClaI	ATCGAT	1 cut(s)	1877
Csp6I	GTAC	7 cut(s)	180, 959, 1035, 1202, 2020, 2043, 2200
CviAII	CATG	9 cut(s)	61, 135, 246, 253, 352, 686, 741, 1439, 2116
CviQI	GTAC	7 cut(s)	180, 959, 1035, 1202, 2020, 2043, 2200
DdeI	CTNAG	6 cut(s)	339, 405, 861, 1178, 1655, 1938
DraI	TTTAAA	2 cut(s)	768, 1804
EaeI	YGGCCR	1 cut(s)	288
EagI	CGGCCG	1 cut(s)	288
Eam1104I	CTCTTC	1 cut(s)	2147
EarI	CTCTTC	1 cut(s)	2147
Ecl136II	GAGCTC	1 cut(s)	2035
EclXI	CGGCCG	1 cut(s)	288
Eco105I	TACGTA	2 cut(s)	483, 962
Eco130I	CCWWGG	4 cut(s)	252, 380, 652, 1433
Eco147I	AGGCCT	2 cut(s)	608, 1183
Eco24I	GRGCYC	1 cut(s)	2037
Eco31I	GGTCTC	3 cut(s)	353, 1328, 2149
Eco47I	GGWCC	5 cut(s)	249, 464, 1165, 1927, 2182
Eco47III	AGCGCT	1 cut(s)	802
Eco52I	CGGCCG	1 cut(s)	288
Eco53kI	GAGCTC	1 cut(s)	2035
Eco57I	CTGAAG	4 cut(s)	711, 840, 1154, 2171
Eco81I	CCTNAGG	1 cut(s)	1938
Eco88I	CYCGRG	1 cut(s)	1160
Eco91I	GGTNACC	3 cut(s)	445, 1459, 1679
EcoICRI	GAGCTC	1 cut(s)	2035
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoO65I	GGTNACC	3 cut(s)	445, 1459, 1679
EcoRI	GAATTC	1 cut(s)	854
EcoRII	CCWGG	1 cut(s)	547
EcoT14I	CCWWGG	4 cut(s)	252, 380, 652, 1433
EcoT38I	GRGCYC	1 cut(s)	2037
ErhI	CCWWGG	4 cut(s)	252, 380, 652, 1433
FaeI	CATG	9 cut(s)	64, 138, 249, 256, 355, 689, 744, 1442, 2119
FalI	AAGNNNNNCTT	2 cut(s)	1575, 1607
FaqI	GGGAC	3 cut(s)	1407, 1550, 1913
FatI	CATG	9 cut(s)	60, 134, 245, 252, 351, 685, 740, 1438, 2115
FauI	CCCGC	1 cut(s)	304
FbaI	TGATCA	2 cut(s)	63, 1084
FblI	GTMKAC	2 cut(s)	198, 926
FokI	GGATG	3 cut(s)	356, 1237, 2042
FriOI	GRGCYC	1 cut(s)	2037
FseI	GGCCGGCC	1 cut(s)	290
FspBI	CTAG	4 cut(s)	113, 798, 1206, 1434
GlaI	GCGC	1 cut(s)	802
GsuI	CTGGAG	3 cut(s)	152, 570, 963
HaeII	RGCGCY	1 cut(s)	804
HaeIII	GGCC	8 cut(s)	286, 290, 304, 316, 608, 1073, 1183, 1494
HapII	CCGG	6 cut(s)	287, 305, 317, 362, 1254, 1604
HhaI	GCGC	1 cut(s)	803
Hin1II	CATG	9 cut(s)	64, 138, 249, 256, 355, 689, 744, 1442, 2119
Hin6I	GCGC	1 cut(s)	801
HinP1I	GCGC	1 cut(s)	801
HincII	GTYRAC	1 cut(s)	1240
HindII	GTYRAC	1 cut(s)	1240
HindIII	AAGCTT	1 cut(s)	23
HinfI	GANTC	8 cut(s)	278, 374, 398, 508, 1046, 1309, 1595, 1904
HpaII	CCGG	6 cut(s)	287, 305, 317, 362, 1254, 1604
HphI	GGTGA	6 cut(s)	128, 222, 439, 1453, 1751, 1829
Hpy166II	GTNNAC	7 cut(s)	199, 884, 927, 959, 1035, 1240, 2092
Hpy188I	TCNGA	7 cut(s)	327, 417, 530, 894, 1151, 2052, 2066
Hpy188III	TCNNGA	5 cut(s)	169, 488, 713, 1172, 1313
Hpy8I	GTNNAC	7 cut(s)	199, 884, 927, 959, 1035, 1240, 2092
HpyAV	CCTTC	6 cut(s)	262, 755, 815, 1178, 2002, 2201
HpyCH4III	ACNGT	4 cut(s)	1558, 2186, 2199, 2204
HpyCH4IV	ACGT	4 cut(s)	482, 633, 961, 1523
HpyF10VI	GCNNNNNNNGC	5 cut(s)	317, 436, 605, 983, 1766
HpyF3I	CTNAG	6 cut(s)	339, 405, 861, 1178, 1655, 1938
HpySE526I	ACGT	4 cut(s)	482, 633, 961, 1523
Hsp92II	CATG	9 cut(s)	64, 138, 249, 256, 355, 689, 744, 1442, 2119
HspAI	GCGC	1 cut(s)	801
KpnI	GGTACC	1 cut(s)	1205
KroI	GCCGGC	3 cut(s)	286, 304, 316
KroNI	GCCGGC	3 cut(s)	288, 306, 318
Ksp22I	TGATCA	2 cut(s)	63, 1084
KspI	CCGCGG	1 cut(s)	538
LmnI	GCTCC	6 cut(s)	327, 355, 974, 1003, 1766, 2216
Lsp1109I	GCAGC	9 cut(s)	345, 490, 887, 1352, 1408, 1454, 1482, 1970, 2151
LweI	GCATC	4 cut(s)	490, 1116, 1609, 1975
MaeI	CTAG	4 cut(s)	113, 798, 1206, 1434
MaeII	ACGT	4 cut(s)	482, 633, 961, 1523
MaeIII	GTNAC	5 cut(s)	155, 445, 1459, 1679, 1739
MboII	GAAGA	7 cut(s)	1052, 1055, 1055, 1279, 1282, 1706, 2164
MfeI	CAATTG	1 cut(s)	774
MflI	RGATCY	3 cut(s)	1118, 1696, 2125
MhlI	GDGCHC	2 cut(s)	1638, 2037
MluCI	AATT	7 cut(s)	95, 751, 763, 774, 854, 978, 1448
MlyI	GAGTC	4 cut(s)	383, 392, 1604, 1913
MmeI	TCCRAC	3 cut(s)	351, 1926, 2162
MroNI	GCCGGC	3 cut(s)	286, 304, 316
MroXI	GAANNNNTTC	1 cut(s)	517
MseI	TTAA	7 cut(s)	21, 99, 150, 767, 1803, 2081, 2169
MslI	CAYNNNNRTG	4 cut(s)	458, 920, 1080, 1737
MspA1I	CMGCKG	3 cut(s)	537, 1467, 2164
MspI	CCGG	6 cut(s)	287, 305, 317, 362, 1254, 1604
MspR9I	CCNGG	2 cut(s)	549, 1255
MunI	CAATTG	1 cut(s)	774
MvaI	CCWGG	1 cut(s)	549
MvnI	CGCG	1 cut(s)	537
MwoI	GCNNNNNNNGC	5 cut(s)	317, 436, 605, 983, 1766
NaeI	GCCGGC	3 cut(s)	288, 306, 318
NciI	CCSGG	1 cut(s)	1255
NcoI	CCATGG	1 cut(s)	252
NgoMIV	GCCGGC	3 cut(s)	286, 304, 316
NlaIII	CATG	9 cut(s)	64, 138, 249, 256, 355, 689, 744, 1442, 2119
NlaIV	GGNNCC	6 cut(s)	315, 465, 1120, 1203, 1929, 2100
NmuCI	GTSAC	3 cut(s)	445, 1459, 1739
NspI	RCATGY	2 cut(s)	138, 1442
NspV	TTCGAA	1 cut(s)	511
OliI	CACNNNNGTG	1 cut(s)	458
PaeI	GCATGC	1 cut(s)	138
PaeR7I	CTCGAG	1 cut(s)	1160
PceI	AGGCCT	2 cut(s)	608, 1183
PdiI	GCCGGC	3 cut(s)	288, 306, 318
PdmI	GAANNNNTTC	1 cut(s)	517
PfeI	GAWTC	4 cut(s)	278, 508, 1046, 1309
PflFI	GACNNNGTC	1 cut(s)	247
PflMI	CCANNNNNTGG	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	547
PleI	GAGTC	4 cut(s)	382, 392, 1603, 1912
PpsI	GAGTC	4 cut(s)	382, 392, 1603, 1912
Ppu21I	YACGTR	2 cut(s)	483, 962
PpuMI	RGGWCCY	1 cut(s)	1165
PsiI	TTATAA	2 cut(s)	42, 207
Psp124BI	GAGCTC	1 cut(s)	2037
Psp5II	RGGWCCY	1 cut(s)	1165
Psp6I	CCWGG	1 cut(s)	547
PspEI	GGTNACC	3 cut(s)	445, 1459, 1679
PspGI	CCWGG	1 cut(s)	547
PspN4I	GGNNCC	6 cut(s)	315, 465, 1120, 1203, 1929, 2100
PspPI	GGNCC	7 cut(s)	249, 314, 464, 1072, 1165, 1927, 2182
PspPPI	RGGWCCY	1 cut(s)	1165
PspXI	VCTCGAGB	1 cut(s)	1160
PstI	CTGCAG	1 cut(s)	1472
PsuI	RGATCY	3 cut(s)	1118, 1696, 2125
PsyI	GACNNNGTC	1 cut(s)	247
PvuII	CAGCTG	2 cut(s)	1467, 2164
RigI	GGCCGGCC	1 cut(s)	290
RsaI	GTAC	7 cut(s)	181, 960, 1036, 1203, 2021, 2044, 2201
RsaNI	GTAC	7 cut(s)	180, 959, 1035, 1202, 2020, 2043, 2200
RseI	CAYNNNNRTG	4 cut(s)	458, 920, 1080, 1737
SacI	GAGCTC	1 cut(s)	2037
SacII	CCGCGG	1 cut(s)	538
SaqAI	TTAA	7 cut(s)	21, 99, 150, 767, 1803, 2081, 2169
Sau96I	GGNCC	7 cut(s)	249, 314, 464, 1072, 1165, 1927, 2182
ScaI	AGTACT	2 cut(s)	181, 2044
SchI	GAGTC	4 cut(s)	383, 392, 1604, 1913
ScrFI	CCNGG	2 cut(s)	549, 1255
SduI	GDGCHC	2 cut(s)	1638, 2037
SfaNI	GCATC	4 cut(s)	490, 1116, 1609, 1975
SfcI	CTRYAG	2 cut(s)	1125, 1468
Sfr274I	CTCGAG	1 cut(s)	1160
Sfr303I	CCGCGG	1 cut(s)	538
SfuI	TTCGAA	1 cut(s)	511
SgrBI	CCGCGG	1 cut(s)	538
SinI	GGWCC	5 cut(s)	249, 464, 1165, 1927, 2182
SlaI	CTCGAG	1 cut(s)	1160
SmiMI	CAYNNNNRTG	4 cut(s)	458, 920, 1080, 1737
SmlI	CTYRAG	2 cut(s)	1160, 1592
SmoI	CTYRAG	2 cut(s)	1160, 1592
SnaBI	TACGTA	2 cut(s)	483, 962
SphI	GCATGC	1 cut(s)	138
Sse9I	AATT	7 cut(s)	95, 751, 763, 774, 854, 978, 1448
SseBI	AGGCCT	2 cut(s)	608, 1183
SspI	AATATT	2 cut(s)	86, 2174
SspMI	CTAG	4 cut(s)	113, 798, 1206, 1434
SstI	GAGCTC	1 cut(s)	2037
StuI	AGGCCT	2 cut(s)	608, 1183
StyD4I	CCNGG	2 cut(s)	547, 1253
StyI	CCWWGG	4 cut(s)	252, 380, 652, 1433
TaaI	ACNGT	4 cut(s)	1558, 2186, 2199, 2204
TaiI	ACGT	4 cut(s)	485, 636, 964, 1526
TaqI	TCGA	5 cut(s)	56, 281, 511, 1161, 1877
TaqII	GACCGA	1 cut(s)	1991
TasI	AATT	7 cut(s)	95, 751, 763, 774, 854, 978, 1448
TatI	WGTACW	4 cut(s)	179, 2019, 2042, 2199
TauI	GCSGC	5 cut(s)	293, 311, 439, 442, 537
TfiI	GAWTC	4 cut(s)	278, 508, 1046, 1309
Tru1I	TTAA	7 cut(s)	21, 99, 150, 767, 1803, 2081, 2169
Tru9I	TTAA	7 cut(s)	21, 99, 150, 767, 1803, 2081, 2169
TscAI	CASTG	5 cut(s)	593, 1605, 1636, 2202, 2209
TseFI	GTSAC	3 cut(s)	445, 1459, 1739
TseI	GCWGC	9 cut(s)	358, 503, 875, 1340, 1421, 1467, 1470, 1958, 2164
Tsp45I	GTSAC	3 cut(s)	445, 1459, 1739
TspDTI	ATGAA	6 cut(s)	250, 664, 1038, 1239, 1721, 1787
TspGWI	ACGGA	5 cut(s)	184, 456, 585, 913, 1052
TspRI	CASTG	5 cut(s)	593, 1605, 1636, 2202, 2209
Tth111I	GACNNNGTC	1 cut(s)	247
Van91I	CCANNNNNTGG	1 cut(s)	431
VpaK11BI	GGWCC	5 cut(s)	249, 464, 1165, 1927, 2182
XapI	RAATTY	2 cut(s)	854, 1448
XceI	RCATGY	2 cut(s)	138, 1442
XhoI	CTCGAG	1 cut(s)	1160
XmaJI	CCTAGG	1 cut(s)	1433
XmiI	GTMKAC	2 cut(s)	198, 926
XmnI	GAANNNNTTC	1 cut(s)	517
XspI	CTAG	4 cut(s)	113, 798, 1206, 1434
ZrmI	AGTACT	2 cut(s)	181, 2044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.