Long chain acyl-CoA synthetase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AMP-binding | PF00501 | 30 - 140 | 3.8e-13 | AMP-binding enzyme |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 374 |
| AcsI | RAATTY | 2 cut(s) | 302, 319 |
| AcuI | CTGAAG | 2 cut(s) | 159, 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 313 |
| AgsI | TTSAA | 2 cut(s) | 147, 161 |
| AluBI | AGCT | 2 cut(s) | 152, 231 |
| AluI | AGCT | 2 cut(s) | 152, 231 |
| Alw21I | GWGCWC | 1 cut(s) | 365 |
| Alw44I | GTGCAC | 1 cut(s) | 361 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 329 |
| ApaLI | GTGCAC | 1 cut(s) | 361 |
| ApeKI | GCWGC | 2 cut(s) | 4, 421 |
| ApoI | RAATTY | 2 cut(s) | 302, 319 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 306 |
| BaeGI | GKGCMC | 1 cut(s) | 365 |
| Bbv12I | GWGCWC | 1 cut(s) | 365 |
| BbvI | GCAGC | 1 cut(s) | 16 |
| BccI | CCATC | 1 cut(s) | 34 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BisI | GCNGC | 2 cut(s) | 5, 422 |
| BlsI | GCNGC | 2 cut(s) | 6, 423 |
| BmrI | ACTGGG | 1 cut(s) | 284 |
| BmuI | ACTGGG | 1 cut(s) | 284 |
| BpmI | CTGGAG | 1 cut(s) | 411 |
| BsaJI | CCNNGG | 2 cut(s) | 36, 96 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 313 |
| Bse1I | ACTGG | 2 cut(s) | 279, 394 |
| BseDI | CCNNGG | 2 cut(s) | 36, 96 |
| BseGI | GGATG | 1 cut(s) | 337 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 313 |
| BseNI | ACTGG | 2 cut(s) | 279, 394 |
| BseSI | GKGCMC | 1 cut(s) | 365 |
| BseXI | GCAGC | 1 cut(s) | 16 |
| BsiHKAI | GWGCWC | 1 cut(s) | 365 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 313 |
| Bsp1286I | GDGCHC | 1 cut(s) | 365 |
| Bsp19I | CCATGG | 1 cut(s) | 36 |
| BsrI | ACTGG | 2 cut(s) | 279, 394 |
| BssECI | CCNNGG | 2 cut(s) | 36, 96 |
| BssNAI | GTATAC | 1 cut(s) | 375 |
| BssT1I | CCWWGG | 1 cut(s) | 36 |
| Bst1107I | GTATAC | 1 cut(s) | 375 |
| Bst4CI | ACNGT | 2 cut(s) | 134, 203 |
| BstDEI | CTNAG | 1 cut(s) | 417 |
| BstDSI | CCRYGG | 1 cut(s) | 36 |
| BstF5I | GGATG | 1 cut(s) | 337 |
| BstNSI | RCATGY | 1 cut(s) | 56 |
| BstSLI | GKGCMC | 1 cut(s) | 365 |
| BstV1I | GCAGC | 1 cut(s) | 16 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 15 |
| BstZ17I | GTATAC | 1 cut(s) | 375 |
| BtgI | CCRYGG | 1 cut(s) | 36 |
| BtsCI | GGATG | 1 cut(s) | 337 |
| CaiI | CAGNNNCTG | 1 cut(s) | 329 |
| CviAII | CATG | 3 cut(s) | 37, 53, 64 |
| CviJI | RGCY | 7 cut(s) | 7, 25, 35, 62, 152, 231, 288 |
| CviKI_1 | RGCY | 7 cut(s) | 7, 25, 35, 62, 152, 231, 288 |
| DdeI | CTNAG | 1 cut(s) | 417 |
| DraI | TTTAAA | 1 cut(s) | 216 |
| Eco130I | CCWWGG | 1 cut(s) | 36 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 293 |
| EcoRI | GAATTC | 1 cut(s) | 302 |
| EcoT14I | CCWWGG | 1 cut(s) | 36 |
| ErhI | CCWWGG | 1 cut(s) | 36 |
| FaeI | CATG | 3 cut(s) | 40, 56, 67 |
| FaiI | YATR | 9 cut(s) | 38, 54, 65, 75, 77, 89, 103, 185, 375 |
| FatI | CATG | 3 cut(s) | 36, 52, 63 |
| FauNDI | CATATG | 1 cut(s) | 75 |
| FblI | GTMKAC | 1 cut(s) | 374 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 422 |
| FokI | GGATG | 1 cut(s) | 324 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 422 |
| FspBI | CTAG | 1 cut(s) | 246 |
| GluI | GCNGC | 2 cut(s) | 5, 422 |
| GsuI | CTGGAG | 1 cut(s) | 411 |
| Hin1II | CATG | 3 cut(s) | 40, 56, 67 |
| HinfI | GANTC | 1 cut(s) | 326 |
| Hpy166II | GTNNAC | 2 cut(s) | 363, 375 |
| Hpy188I | TCNGA | 3 cut(s) | 31, 325, 331 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 2 cut(s) | 363, 375 |
| HpyAV | CCTTC | 3 cut(s) | 203, 253, 317 |
| HpyCH4III | ACNGT | 2 cut(s) | 134, 203 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 52, 113, 363 |
| HpyF3I | CTNAG | 1 cut(s) | 417 |
| Hsp92II | CATG | 3 cut(s) | 40, 56, 67 |
| LpnPI | CCDG | 5 cut(s) | 62, 189, 260, 270, 375 |
| Lsp1109I | GCAGC | 1 cut(s) | 16 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MboII | GAAGA | 1 cut(s) | 281 |
| MfeI | CAATTG | 1 cut(s) | 222 |
| MhlI | GDGCHC | 1 cut(s) | 365 |
| MluCI | AATT | 3 cut(s) | 222, 302, 319 |
| MnlI | CCTC | 3 cut(s) | 106, 292, 342 |
| MroXI | GAANNNNTTC | 1 cut(s) | 306 |
| MseI | TTAA | 2 cut(s) | 215, 427 |
| MslI | CAYNNNNRTG | 2 cut(s) | 13, 368 |
| MunI | CAATTG | 1 cut(s) | 222 |
| NcoI | CCATGG | 1 cut(s) | 36 |
| NdeI | CATATG | 1 cut(s) | 75 |
| NlaIII | CATG | 3 cut(s) | 40, 56, 67 |
| NspI | RCATGY | 1 cut(s) | 56 |
| PdmI | GAANNNNTTC | 1 cut(s) | 306 |
| PfeI | GAWTC | 1 cut(s) | 326 |
| PkrI | GCNGC | 2 cut(s) | 6, 423 |
| PstNI | CAGNNNCTG | 1 cut(s) | 329 |
| RseI | CAYNNNNRTG | 2 cut(s) | 13, 368 |
| SaqAI | TTAA | 2 cut(s) | 215, 427 |
| SatI | GCNGC | 2 cut(s) | 5, 422 |
| SduI | GDGCHC | 1 cut(s) | 365 |
| SetI | ASST | 3 cut(s) | 154, 233, 406 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 13, 368 |
| Sse9I | AATT | 3 cut(s) | 222, 302, 319 |
| SspMI | CTAG | 1 cut(s) | 246 |
| StyI | CCWWGG | 1 cut(s) | 36 |
| TaaI | ACNGT | 2 cut(s) | 134, 203 |
| TasI | AATT | 3 cut(s) | 222, 302, 319 |
| TfiI | GAWTC | 1 cut(s) | 326 |
| Tru1I | TTAA | 2 cut(s) | 215, 427 |
| Tru9I | TTAA | 2 cut(s) | 215, 427 |
| TseI | GCWGC | 2 cut(s) | 4, 421 |
| TspDTI | ATGAA | 1 cut(s) | 112 |
| VneI | GTGCAC | 1 cut(s) | 361 |
| XapI | RAATTY | 2 cut(s) | 302, 319 |
| XceI | RCATGY | 1 cut(s) | 56 |
| XmiI | GTMKAC | 1 cut(s) | 374 |
| XmnI | GAANNNNTTC | 1 cut(s) | 306 |
| XspI | CTAG | 1 cut(s) | 246 |