Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000225

Physical Location & Seq

Genomic Coordinates Reverse (-)

16458783 .. 16462634

Gene Structure 3852 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ23467

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGCTTGGTCAACGCCAAGTCAACGATAAGAAGGGAGATCGTTGTGGTATATATGGATCAAATTGCCCCCAATGGATTCTTGCAATGGAGGCCTGTGCTAATGCAGTTGAGTTCATCATCAACCATGCTGAAGTTTCAATAGCTTTTGTTCAAGAGAACAAGATCCCTGCTTGTACAGAAGAAGATTCATATTTTTCGTTTCTCCCGTTGGCACATATATATGACCAAATAATCGAGAGCTATTGCATCTACAAGGGATCTTCAATAGGCTTCTGGCGAGGCGATGTCAGGTTTTTACTGGACGGCCTTCAGGAACTAAAGCCTACTACGTTTTGTGAGGTTCCTCGAGTTTATGACCGTATATACACTGGTATTGCTAGTAAAGTTTCATCTGGTGGTGTGCTGTGGAAGACCCTTTTCCACAAGTTGGCAAATCTGGAGAATGGTTTACCACAAGAAAAATCGGCACCTCTCTTGGACAAGCTTGTATTTAACAAGATAAAACAAGGATTAGGAGGACGAGTTCGTATAATGTTGTCTGGTGCTGCACCTTTGCCCAGGCATGTGGAGGAATTTTTGAGGGTCACCAGCTGCAGCACTTTATCACAAGGATATGGCCTTACTGAAAGCTGTGGTGGCTGTTTTACGTCCATTGGCAATGTTTATCCTATGATTGGGACTGTGGGTGTCCCCTTGACAACTATTGAAGCACGGCTTGAGTCGGTCCCAGAACTGGGATATGATGCACTTTCTAGTGTGCCACGTGGAGAGATCTGCCTAAGAGGAAAATCCTTGTTTTCTGGTTACCACAAGCGAGCAGATCTCACTGAAGAAGTCCTTATTGATGGGTGGTTCCATACAGGTGATATTGGAGAATGGCAGCCTAATGGAGCAATGAAAGTTATAGACAGGAAAAAGAACATATTTAAACTGTCTCAAGGTGAATATGTTGCTGTGGAAAGCATTGAAAGCAAATACTTGCAATGCCCCCTTGTCACATCGATTTGGGTTTATGGGAACAGCTTCGAGTCATTTCTTGTTGCTGTGGTTGTTCCTGACAGAAAGGCCTTGGAGGACTGGGCAGCTGAGCATCATTTGACTGATGACTACAAATCATTGTGTCAAAACATGAGGGCAAGAAAATACATTTTGGATGAGCTCCATCCCTGTTTCATGCTTCGAGGGTTTGAGTTGTTAAAAGCAGTTCATGTGGAACCAAACCCCTTTGACATAGAGAGGGATCTCATGACCCCAACTTTCAAACTGAAAAGACCGCAATTACTCAAATATTACAAGGATCAAGTTGAAAAACTTTATAGTGAAGCAAACGGTGGAAAAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010143 GO:0010311 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0022622 GO:0030054 GO:0031957 GO:0032501 GO:0032502 GO:0032787 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0098542 GO:0099402 GO:1901576 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

447

Amino Acids

50.28

Weight (kDa)

6.24

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	42 - 270	6.9e-32	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49430 AT1G49430
fragaria_vesca	FvH4_2g07450 FvH4_2g07450 FvH4_2g07450 FvH4_6g05950 FvH4_6g05960
malus_domestica	MD05G1070800.v1.1 MD10G1085200.v1.1 MD10G1085400.v1.1
prunus_persica	Prupe.8G108400_v2.0.a1 Prupe.8G108600_v2.0.a1 Prupe.8G108900_v2.0.a1
pyrus_communis	pycom10g06680
rosa_chinensis	RchiOBHm_Chr0c38g0502991 RchiOBHm_Chr0c38g0503001 RchiOBHm_Chr0c38g0503011 RchiOBHm_Chr0c38g0503031 RchiOBHm_Chr1g0351481 RchiOBHm_Chr6g0261071 RchiOBHm_Chr6g0261081 RchiOBHm_Chr6g0261101 RchiOBHm_Chr6g0261171 RchiOBHm_Chr6g0261181 RchiOBHm_Chr6g0261201 RchiOBHm_Chr6g0261211 RchiOBHm_Chr6g0261271 RchiOBHm_Chr6g0261291 RchiOBHm_Chr6g0261301 RchiOBHm_Chr6g0261311 RchiOBHm_Chr6g0261431 RchiOBHm_Chr6g0261521 RchiOBHm_Chr6g0261591 RchiOBHm_Chr6g0261601 RchiOBHm_Chr6g0261611 RchiOBHm_Chr6g0261621 RchiOBHm_Chr6g0261631 RchiOBHm_Chr6g0261651 RchiOBHm_Chr6g0261671 RchiOBHm_Chr6g0261761 RchiOBHm_Chr6g0261791 RchiOBHm_Chr6g0261801 RchiOBHm_Chr6g0261891 RchiOBHm_Chr6g0261911 RchiOBHm_Chr6g0261921 RchiOBHm_Chr6g0261931 RchiOBHm_Chr6g0261951 RchiOBHm_Chr6g0261961 RchiOBHm_Chr6g0261981 RchiOBHm_Chr6g0262641 RchiOBHm_Chr6g0262661 RchiOBHm_Chr6g0262711 RchiOBHm_Chr6g0262721 RchiOBHm_Chr6g0262801 RchiOBHm_Chr6g0262811 RchiOBHm_Chr6g0262821 RchiOBHm_Chr6g0262831 RchiOBHm_Chr6g0262871 RchiOBHm_Chr6g0262881 RchiOBHm_Chr6g0267811
rosa_laevigata	RLG00000014207 RLG00000014410 RLG00000014461 RLG00000014462 RLG00000014463 RLG00000030683
rosa_multiflora	Rmu_co8313283.1_g000002 Rmu_sc0000596.1_g000052 Rmu_sc0001833.1_g000009 Rmu_sc0003487.1_g000003 Rmu_sc0003487.1_g000007 Rmu_sc0004766.1_g000001 Rmu_sc0005237.1_g000021 Rmu_sc0006655.1_g000001 Rmu_sc0015236.1_g000003 Rmu_sc0015236.1_g000004 Rmu_sc0028652.1_g000010 Rmu_sc0031142.1_g000001 Rmu_sc0036063.1_g000001 Rmu_ssc0000359.1_g000047 Rmu_ssc0000359.1_g000054 Rmu_ssc0000359.1_g000058 Rmu_ssc0000359.1_g000060
rosa_roxburghii	Rroxscaffold_175G00432240 Rroxscaffold_177G00434140 Rroxscaffold_177G00434220 Rroxscaffold_2G00103180 Rroxscaffold_2G00103450 Rroxscaffold_4G00314540 Rroxscaffold_7G00202920 Rroxscaffold_7G00202940 Rroxscaffold_7G00207640 Rroxscaffold_7G00207650 Rroxscaffold_7G00207670 Rroxscaffold_7G00207690 Rroxscaffold_7G00207700 Rroxscaffold_7G00207720
rosa_rugosa	Rorug05G0594700 Rorug05G0594900 Rorug06G0013300 Rorug07G0072100
rosa_samantha	Rh4AG177500 Rh5AG318000 Rh6AG114200 Rh6AG120600 Rh6AG137000 Rh6AG137100 Rh6AG161100 Rh6BG107900 Rh6BG108000 Rh6BG108200 Rh6BG108300 Rh6BG108400 Rh6BG113800 Rh6BG134400 Rh6BG134500 Rh6BG134600 Rh6BG134700 Rh6BG134900 Rh6BG135100 Rh6BG135300 Rh6BG135400 Rh6CG105000 Rh6CG105100 Rh6CG105500 Rh6CG105600 Rh6CG105700 Rh6CG105800 Rh6CG111800 Rh6CG132500 Rh6CG132900 Rh6CG133000 Rh6CG133200 Rh6CG133400 Rh6CG133500 Rh6CG133600 Rh6CG133700 Rh6CG133800 Rh6CG152600 Rh6CG159000 Rh6DG120200
rosa_wichuraiana	Rw0G012740 Rw6G002860 Rw6G009790 Rw6G010330

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	466
AccB7I	CCANNNNNTGG	1 cut(s)	427
AciI	CCGC	1 cut(s)	1274
AclWI	GGATC	5 cut(s)	64, 157, 265, 1248, 1305
AcsI	RAATTY	1 cut(s)	572
AcuI	CTGAAG	3 cut(s)	150, 293, 849
AcvI	CACGTG	1 cut(s)	764
AfaI	GTAC	1 cut(s)	175
AfiI	CCNNNNNNNGG	4 cut(s)	427, 674, 733, 734
AgsI	TTSAA	7 cut(s)	138, 152, 264, 707, 968, 1261, 1307
AjnI	CCWGG	1 cut(s)	557
AloI	GAACNNNNNNTCC	2 cut(s)	507, 539
AluBI	AGCT	8 cut(s)	143, 240, 484, 591, 630, 1023, 1085, 1159
AluI	AGCT	8 cut(s)	143, 240, 484, 591, 630, 1023, 1085, 1159
Alw21I	GWGCWC	1 cut(s)	1161
Alw26I	GTCTC	1 cut(s)	939
AlwI	GGATC	5 cut(s)	64, 157, 265, 1248, 1305
Ama87I	CYCGRG	1 cut(s)	345
AoxI	GGCC	4 cut(s)	90, 304, 616, 1065
ApeKI	GCWGC	5 cut(s)	545, 591, 594, 880, 1082
ApoI	RAATTY	1 cut(s)	572
Asp700I	GAANNNNTTC	1 cut(s)	1022
AspS9I	GGNCC	1 cut(s)	724
AsuHPI	GGTGA	3 cut(s)	577, 875, 953
AvaI	CYCGRG	1 cut(s)	345
AvaII	GGWCC	1 cut(s)	724
BanI	GGYRCC	1 cut(s)	466
BanII	GRGCYC	1 cut(s)	1161
BbrPI	CACGTG	1 cut(s)	764
BbsI	GAAGAC	1 cut(s)	416
Bbv12I	GWGCWC	1 cut(s)	1161
BbvI	GCAGC	5 cut(s)	532, 578, 606, 892, 1094
BccI	CCATC	2 cut(s)	839, 1170
BceAI	ACGGC	2 cut(s)	319, 728
BciT130I	CCWGG	1 cut(s)	559
BcoDI	GTCTC	1 cut(s)	939
BfaI	CTAG	2 cut(s)	378, 753
BfmI	CTRYAG	1 cut(s)	592
BglII	AGATCT	2 cut(s)	771, 820
BisI	GCNGC	5 cut(s)	546, 592, 595, 881, 1083
BlpI	GCTNAGC	1 cut(s)	1086
BlsI	GCNGC	5 cut(s)	547, 593, 596, 882, 1084
Bme1390I	CCNGG	1 cut(s)	559
Bme18I	GGWCC	1 cut(s)	724
BmeT110I	CYCGRG	1 cut(s)	345
BmgT120I	GGNCC	1 cut(s)	724
BmiI	GGNNCC	5 cut(s)	342, 468, 726, 854, 1215
BmrFI	CCNGG	1 cut(s)	559
BmrI	ACTGGG	2 cut(s)	743, 1087
BmsI	GCATC	3 cut(s)	255, 733, 1099
BmuI	ACTGGG	2 cut(s)	743, 1087
BpiI	GAAGAC	1 cut(s)	416
BplI	GAGNNNNNCTC	2 cut(s)	807, 839
BpmI	CTGGAG	1 cut(s)	458
Bpu1102I	GCTNAGC	1 cut(s)	1086
BpuEI	CTTGAG	2 cut(s)	737, 921
Bsa29I	ATCGAT	1 cut(s)	1001
BsaAI	YACGTR	1 cut(s)	764
BsaJI	CCNNGG	2 cut(s)	557, 1068
BsaXI	ACNNNNNCTCC	2 cut(s)	507, 537
Bsc4I	CCNNNNNNNGG	4 cut(s)	427, 674, 733, 734
Bse1I	ACTGG	4 cut(s)	303, 373, 738, 1082
Bse3DI	GCAATG	4 cut(s)	90, 664, 900, 989
BseBI	CCWGG	1 cut(s)	559
BseCI	ATCGAT	1 cut(s)	1001
BseDI	CCNNGG	2 cut(s)	557, 1068
BseGI	GGATG	2 cut(s)	1159, 1162
BseLI	CCNNNNNNNGG	4 cut(s)	427, 674, 733, 734
BseMI	GCAATG	4 cut(s)	90, 664, 900, 989
BseMII	CTCAG	1 cut(s)	1077
BseNI	ACTGG	4 cut(s)	303, 373, 738, 1082
BseXI	GCAGC	5 cut(s)	532, 578, 606, 892, 1094
BsgI	GTGCAG	1 cut(s)	531
BshFI	GGCC	4 cut(s)	92, 306, 618, 1067
BshNI	GGYRCC	1 cut(s)	466
BshVI	ATCGAT	1 cut(s)	1001
BsiHKAI	GWGCWC	1 cut(s)	1161
BsiHKCI	CYCGRG	1 cut(s)	345
BslFI	GGGAC	3 cut(s)	674, 691, 710
BslI	CCNNNNNNNGG	4 cut(s)	427, 674, 733, 734
BsmAI	GTCTC	1 cut(s)	939
BsmFI	GGGAC	3 cut(s)	674, 691, 710
BsnI	GGCC	4 cut(s)	92, 306, 618, 1067
BsoBI	CYCGRG	1 cut(s)	345
Bsp1286I	GDGCHC	1 cut(s)	1161
Bsp1407I	TGTACA	1 cut(s)	173
Bsp143I	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
Bsp1720I	GCTNAGC	1 cut(s)	1086
BspACI	CCGC	1 cut(s)	1274
BspANI	GGCC	4 cut(s)	92, 306, 618, 1067
BspCNI	CTCAG	1 cut(s)	1078
BspDI	ATCGAT	1 cut(s)	1001
BspHI	TCATGA	1 cut(s)	1245
BspLI	GGNNCC	5 cut(s)	342, 468, 726, 854, 1215
BspMAI	CTGCAG	1 cut(s)	596
BspPI	GGATC	5 cut(s)	64, 157, 265, 1248, 1305
BspT107I	GGYRCC	1 cut(s)	466
BsrDI	GCAATG	4 cut(s)	90, 664, 900, 989
BsrGI	TGTACA	1 cut(s)	173
BsrI	ACTGG	4 cut(s)	303, 373, 738, 1082
BssECI	CCNNGG	2 cut(s)	557, 1068
BssMI	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
BssT1I	CCWWGG	1 cut(s)	1068
Bst2UI	CCWGG	1 cut(s)	559
Bst4CI	ACNGT	4 cut(s)	359, 682, 933, 1331
BstAUI	TGTACA	1 cut(s)	173
BstBAI	YACGTR	1 cut(s)	764
BstC8I	GCNNGC	1 cut(s)	816
BstDEI	CTNAG	2 cut(s)	779, 1086
BstEII	GGTNACC	2 cut(s)	583, 803
BstF5I	GGATG	2 cut(s)	1159, 1162
BstKTI	GATC	8 cut(s)	40, 59, 165, 260, 774, 823, 1243, 1300
BstMAI	GTCTC	1 cut(s)	939
BstMBI	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
BstMWI	GCNNNNNNNGC	3 cut(s)	89, 636, 969
BstNI	CCWGG	1 cut(s)	559
BstNSI	RCATGY	1 cut(s)	566
BstPI	GGTNACC	2 cut(s)	583, 803
BstSCI	CCNGG	1 cut(s)	557
BstSFI	CTRYAG	1 cut(s)	592
BstV1I	GCAGC	5 cut(s)	532, 578, 606, 892, 1094
BstV2I	GAAGAC	1 cut(s)	416
BstX2I	RGATCY	5 cut(s)	162, 257, 771, 820, 1240
BstXI	CCANNNNNNTGG	1 cut(s)	565
BstYI	RGATCY	5 cut(s)	162, 257, 771, 820, 1240
Bsu15I	ATCGAT	1 cut(s)	1001
BsuRI	GGCC	4 cut(s)	92, 306, 618, 1067
BsuTUI	ATCGAT	1 cut(s)	1001
BtgZI	GCGATG	1 cut(s)	297
BtsCI	GGATG	2 cut(s)	1159, 1162
BtsIMutI	CAGTG	2 cut(s)	366, 825
Cac8I	GCNNGC	1 cut(s)	816
CciI	TCATGA	1 cut(s)	1245
Cfr13I	GGNCC	1 cut(s)	724
ClaI	ATCGAT	1 cut(s)	1001
Csp6I	GTAC	1 cut(s)	174
CviAII	CATG	6 cut(s)	125, 563, 1129, 1174, 1208, 1246
CviQI	GTAC	1 cut(s)	174
DdeI	CTNAG	2 cut(s)	779, 1086
DpnI	GATC	8 cut(s)	39, 58, 164, 259, 773, 822, 1242, 1299
DpnII	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
DraI	TTTAAA	1 cut(s)	928
Ecl136II	GAGCTC	1 cut(s)	1159
Eco130I	CCWWGG	1 cut(s)	1068
Eco147I	AGGCCT	2 cut(s)	92, 1067
Eco24I	GRGCYC	1 cut(s)	1161
Eco47I	GGWCC	1 cut(s)	724
Eco53kI	GAGCTC	1 cut(s)	1159
Eco57I	CTGAAG	3 cut(s)	150, 293, 849
Eco72I	CACGTG	1 cut(s)	764
Eco88I	CYCGRG	1 cut(s)	345
Eco91I	GGTNACC	2 cut(s)	583, 803
EcoICRI	GAGCTC	1 cut(s)	1159
EcoO65I	GGTNACC	2 cut(s)	583, 803
EcoRII	CCWGG	1 cut(s)	557
EcoT14I	CCWWGG	1 cut(s)	1068
EcoT38I	GRGCYC	1 cut(s)	1161
ErhI	CCWWGG	1 cut(s)	1068
FaeI	CATG	6 cut(s)	128, 566, 1132, 1177, 1211, 1249
FalI	AAGNNNNNCTT	4 cut(s)	699, 731, 822, 854
FaqI	GGGAC	3 cut(s)	674, 691, 710
FatI	CATG	6 cut(s)	124, 562, 1128, 1173, 1207, 1245
Fnu4HI	GCNGC	5 cut(s)	546, 592, 595, 881, 1083
FokI	GGATG	2 cut(s)	1149, 1166
FriOI	GRGCYC	1 cut(s)	1161
Fsp4HI	GCNGC	5 cut(s)	546, 592, 595, 881, 1083
FspBI	CTAG	2 cut(s)	378, 753
GluI	GCNGC	5 cut(s)	546, 592, 595, 881, 1083
GsuI	CTGGAG	1 cut(s)	458
HaeIII	GGCC	4 cut(s)	92, 306, 618, 1067
Hin1II	CATG	6 cut(s)	128, 566, 1132, 1177, 1211, 1249
HincII	GTYRAC	2 cut(s)	11, 22
HindII	GTYRAC	2 cut(s)	11, 22
HindIII	AAGCTT	1 cut(s)	482
HinfI	GANTC	4 cut(s)	76, 185, 719, 1028
HphI	GGTGA	3 cut(s)	577, 875, 953
Hpy166II	GTNNAC	3 cut(s)	11, 22, 449
Hpy188III	TCNNGA	6 cut(s)	152, 235, 311, 437, 1055, 1246
Hpy8I	GTNNAC	3 cut(s)	11, 22, 449
HpyAV	CCTTC	2 cut(s)	25, 317
HpyCH4III	ACNGT	4 cut(s)	359, 682, 933, 1331
HpyCH4IV	ACGT	3 cut(s)	329, 647, 763
HpyCH4V	TGCA	7 cut(s)	83, 104, 246, 548, 594, 746, 982
HpyF10VI	GCNNNNNNNGC	3 cut(s)	89, 636, 969
HpyF3I	CTNAG	2 cut(s)	779, 1086
HpySE526I	ACGT	3 cut(s)	329, 647, 763
Hsp92II	CATG	6 cut(s)	128, 566, 1132, 1177, 1211, 1249
Kzo9I	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
LmnI	GCTCC	2 cut(s)	890, 1164
Lsp1109I	GCAGC	5 cut(s)	532, 578, 606, 892, 1094
LweI	GCATC	3 cut(s)	255, 733, 1099
MaeI	CTAG	2 cut(s)	378, 753
MaeII	ACGT	3 cut(s)	329, 647, 763
MaeIII	GTNAC	3 cut(s)	583, 803, 994
MalI	GATC	8 cut(s)	39, 58, 164, 259, 773, 822, 1242, 1299
MboI	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
MboII	GAAGA	5 cut(s)	191, 194, 252, 421, 842
MflI	RGATCY	5 cut(s)	162, 257, 771, 820, 1240
MhlI	GDGCHC	1 cut(s)	1161
MluCI	AATT	3 cut(s)	61, 572, 1277
MlyI	GAGTC	2 cut(s)	728, 1037
MroXI	GAANNNNTTC	1 cut(s)	1022
MseI	TTAA	3 cut(s)	492, 927, 1196
MslI	CAYNNNNRTG	2 cut(s)	219, 861
MspA1I	CMGCKG	2 cut(s)	591, 1085
MspR9I	CCNGG	1 cut(s)	559
MvaI	CCWGG	1 cut(s)	559
MwoI	GCNNNNNNNGC	3 cut(s)	89, 636, 969
NdeII	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
NlaIII	CATG	6 cut(s)	128, 566, 1132, 1177, 1211, 1249
NlaIV	GGNNCC	5 cut(s)	342, 468, 726, 854, 1215
NmuCI	GTSAC	2 cut(s)	583, 994
NspI	RCATGY	1 cut(s)	566
PaeR7I	CTCGAG	1 cut(s)	345
PagI	TCATGA	1 cut(s)	1245
PceI	AGGCCT	2 cut(s)	92, 1067
PcsI	WCGNNNNNNNCGW	1 cut(s)	203
PdmI	GAANNNNTTC	1 cut(s)	1022
PfeI	GAWTC	2 cut(s)	76, 185
PflMI	CCANNNNNTGG	1 cut(s)	427
PkrI	GCNGC	5 cut(s)	547, 593, 596, 882, 1084
PleI	GAGTC	2 cut(s)	727, 1036
PmaCI	CACGTG	1 cut(s)	764
PmlI	CACGTG	1 cut(s)	764
PpsI	GAGTC	2 cut(s)	727, 1036
Ppu21I	YACGTR	1 cut(s)	764
Psp124BI	GAGCTC	1 cut(s)	1161
Psp6I	CCWGG	1 cut(s)	557
PspCI	CACGTG	1 cut(s)	764
PspEI	GGTNACC	2 cut(s)	583, 803
PspGI	CCWGG	1 cut(s)	557
PspN4I	GGNNCC	5 cut(s)	342, 468, 726, 854, 1215
PspPI	GGNCC	1 cut(s)	724
PspXI	VCTCGAGB	1 cut(s)	345
PstI	CTGCAG	1 cut(s)	596
PsuI	RGATCY	5 cut(s)	162, 257, 771, 820, 1240
PvuII	CAGCTG	2 cut(s)	591, 1085
RsaI	GTAC	1 cut(s)	175
RsaNI	GTAC	1 cut(s)	174
RseI	CAYNNNNRTG	2 cut(s)	219, 861
SacI	GAGCTC	1 cut(s)	1161
SaqAI	TTAA	3 cut(s)	492, 927, 1196
SatI	GCNGC	5 cut(s)	546, 592, 595, 881, 1083
Sau3AI	GATC	8 cut(s)	37, 56, 162, 257, 771, 820, 1240, 1297
Sau96I	GGNCC	1 cut(s)	724
SchI	GAGTC	2 cut(s)	728, 1037
ScrFI	CCNGG	1 cut(s)	559
SduI	GDGCHC	1 cut(s)	1161
SfaNI	GCATC	3 cut(s)	255, 733, 1099
SfcI	CTRYAG	1 cut(s)	592
Sfr274I	CTCGAG	1 cut(s)	345
SinI	GGWCC	1 cut(s)	724
SlaI	CTCGAG	1 cut(s)	345
SmiMI	CAYNNNNRTG	2 cut(s)	219, 861
SmlI	CTYRAG	3 cut(s)	345, 716, 936
SmoI	CTYRAG	3 cut(s)	345, 716, 936
Sse9I	AATT	3 cut(s)	61, 572, 1277
SseBI	AGGCCT	2 cut(s)	92, 1067
SsiI	CCGC	1 cut(s)	1274
SspI	AATATT	1 cut(s)	1289
SspMI	CTAG	2 cut(s)	378, 753
SstI	GAGCTC	1 cut(s)	1161
StuI	AGGCCT	2 cut(s)	92, 1067
StyD4I	CCNGG	1 cut(s)	557
StyI	CCWWGG	1 cut(s)	1068
TaaI	ACNGT	4 cut(s)	359, 682, 933, 1331
TaiI	ACGT	3 cut(s)	332, 650, 766
TaqI	TCGA	5 cut(s)	234, 346, 1001, 1026, 1180
TaqII	GACCGA	1 cut(s)	712
TasI	AATT	3 cut(s)	61, 572, 1277
TatI	WGTACW	1 cut(s)	173
TfiI	GAWTC	2 cut(s)	76, 185
Tru1I	TTAA	3 cut(s)	492, 927, 1196
Tru9I	TTAA	3 cut(s)	492, 927, 1196
TscAI	CASTG	2 cut(s)	373, 832
TseFI	GTSAC	2 cut(s)	583, 994
TseI	GCWGC	5 cut(s)	545, 591, 594, 880, 1082
Tsp45I	GTSAC	2 cut(s)	583, 994
TspDTI	ATGAA	6 cut(s)	103, 177, 378, 911, 1162, 1196
TspRI	CASTG	2 cut(s)	373, 832
Van91I	CCANNNNNTGG	1 cut(s)	427
VpaK11BI	GGWCC	1 cut(s)	724
XapI	RAATTY	1 cut(s)	572
XceI	RCATGY	1 cut(s)	566
XhoI	CTCGAG	1 cut(s)	345
XmnI	GAANNNNTTC	1 cut(s)	1022
XspI	CTAG	2 cut(s)	378, 753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.